Ggra3488.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3488.t1
Unique NameGgra3488.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length953
Homology
BLAST of Ggra3488.t1 vs. uniprot
Match: A0A2V3J4F0 (Pseudouridylate synthase 7-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F0_9FLOR)

HSP 1 Score: 734 bits (1896), Expect = 2.090e-249
Identity = 476/990 (48.08%), Postives = 624/990 (63.03%), Query Frame = 0
Query:    1 MPVTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASPKRPR---PP--SPSPSSIPFSEIDQFFPSPDPPPSAALSAAISEASTSHAFPVLKDKHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRNSFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIGLSKPD-STNNKHAIEGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFKTHAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEALVAELNRKETTSHGNSTKKNEESMSKRVNCVSDPQGPNEGQKIQEKMDAEVINGEIGKDGGSP--TVEHGEKRDGAPQEHEVGESQSKESSKEDAHDGKDSVAQ-EMELEAVESDAGQEHASESV-DIPKES-----QKGVG-----DNPA-DGGISKDESAEQSK-DEAIGLEEGEGTEATGKDEASGDVQIEDTAKDQKGDQAKENTEAIE-----AKDASINKSTDIGLVAKDEVDGQQGTGEAKENKDVSDGSGAVPVTQEVSEGEAIGSDAVRLVQNIEEQTVPGKVSKEQPDEKNVLVEDASHDKAEDASGNDVVPHQLPASMEVGGNINVE--SGYLSKSDRDEGNGEGK---------PRRALIISFSLGCAEYATMLVRELTGYESSTAAQKALQTSL 952
            MPVTEADVAITERLSAH PFRAVLKQSV DFIVNEI+  + V+ LT LP+ +PKRPR   PP  +P P+ +  + ID FFP+ D PPS AL+AA++   TSH  P   +K  R  +H+W+R  LPSF  DT+Q+D  Q VR+RRR + RP KRRR +   N Q  +       +DPRE+   + + FP  + VNFVLWK+NRDTTEALT+L +AL RNVKHF YAGTKD+R VTTQLVQIRG+Q+  LA+AN  LL+RD NR SVLVGN ++  T K+  LRLGDLKGNRFTLVLRD E   D  ++ A +SIR VGFINYFGLQRFGSGVSPTHVTGFAVLR DF++VCRRILLPLRIG +  +M P R+RFV AL+QFA  EI+A QLL +LAP+QRIERA+V SFA DE +G+ V DYRKAFG+LPRFLRMMYGHAVQS+LWN+MASERI L +PD  TNN HAI GDL+ E    E ELSFKTK+R VT+EEEE+KS+ VH+V IPV+GSEV LPS  YA   ++I++ EK+D K+  KSE+ +KGTYRRLLA+PK+ E+K  SY+D ++ + PS V  LVAEL      S   +  ++ ES  ++ + VS  +    G++++++   +  N E   DGG     VE  +K     +E  +   Q  E SK+   +G+ +  + E ++   +S A Q    + V D+  E+     + G G     D PA    +S+ E+ E +  D A   +    T+     E  G  + ++T          E TEAI      ++DA+  K+     VAK  VD         E KD    + A    ++      +  D  ++ Q   + T  GKVS           E+  +D+ E A+G++V+     +  + G +   +  + Y + S    GN E            ++AL+ISF+LGCAEYATMLVRELTG+ESSTAAQKALQ S+
Sbjct:    1 MPVTEADVAITERLSAHTPFRAVLKQSVHDFIVNEIASDNTVVALTRLPQFTPKRPRQTPPPQSAPPPAHLSVAPIDAFFPNADSPPSTALAAALAAGHTSHVLPAQPEKSLRKLVHEWIRHNLPSFATDTVQSDAAQAVRLRRRPEGRPRKRRRVEHTNNAQCPSSDHHPHKFDPREYRQHHPSDFPNKALVNFVLWKRNRDTTEALTVLAKALHRNVKHFSYAGTKDRRAVTTQLVQIRGIQQRQLAKANFTLLRRDNNRPSVLVGNPTVVGTGKAPTLRLGDLKGNRFTLVLRDFEAQCDRDVENALHSIRHVGFINYFGLQRFGSGVSPTHVTGFAVLRADFEDVCRRILLPLRIGANVKEMRPERQRFVLALEQFACKEISATQLLPQLAPFQRIERAVVASFADDESKGLPVHDYRKAFGKLPRFLRMMYGHAVQSFLWNIMASERIRLCRPDPKTNNMHAIAGDLVLETHAREAELSFKTKLRRVTEEEEEKKSVPVHHVFIPVVGSEVPLPSAKYAEPARKILQHEKIDLKSLPKSEFALKGTYRRLLALPKNVETKISSYNDVQEQIAPSSVARLVAELQASNRDSDVMAPAESAESREQQDDKVSVMKDEPLGEELKKENTEKESNKE---DGGRDEVVVEEPKKEIECDKEDFMNNEQMTEXSKK--QEGQHAACRKEQDVVVEKSGAPQLTNQQQVRDVASEASSPRYEHGTGNQQRNDKPALPVPVSRTETNENAVVDRASEEQLARSTQDVTSGEEKGHRETDETI---------EGTEAITDSRVVSEDANAAKAE--STVAKQPVD------RTPEGKDKGVANEASNTDKKSDTTSYVVQDTKQMSQG--KSTSEGKVSSN--------TEEIPNDQVEGANGHNVLEANAESDTKTGDDRMEQEFTEYANGSKNTSGNDETSRNEQSDAQATKKALVISFNLGCAEYATMLVRELTGHESSTAAQKALQESV 958          
BLAST of Ggra3488.t1 vs. uniprot
Match: R7QPW3 (TRUD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPW3_CHOCR)

HSP 1 Score: 481 bits (1237), Expect = 6.980e-154
Identity = 289/626 (46.17%), Postives = 387/626 (61.82%), Query Frame = 0
Query:    1 MPVTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASPKRPRPPSP------------SPSSIP-FSEIDQFFPSPDPPPSAALSAAISEASTSH----AFPVLKDKHSRTKLHQWVRQYLPSFVGDTL--QTDD--GQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPRE------HHNQYENSFP----RNSFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDD---SIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTK----MNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIGLSKPDSTNNKHAIEGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLP-SVPYARKVKEIIEAEKLDFKTHAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEALVAELNRKET 587
            MP+TE+DV ITE LS H+PFRA+LKQ ++DF+VNE+++  ++ +LT L +   K    PSP            + S+ P F  ++  F   + P  A++S  I +A  S       P+  DK  RT +H WVR  +P ++ DT+  + DD  GQ VR+R +   RPWKRRR DS  N           TYDPRE       H ++    P    R ++V FVLWK+N+DT +AL  L + L      F YAGTKDKR VTTQLVQ+RGV E   A AN  + +R+R   S+ VG+V +        L LGDLKGNRFTL LRD++   +D   ++Q A  S+R+ GF+NYFGLQRFGSGVS TH TGFA LRGDF++VCRRILLPLR+ + D      + P R++   AL++F + EI+A  LL  L  W  IE AIV SF  DE    D  DYR AF +LPR LR MYGHAVQSYLWNV+ASERI + +PD  +  HAI+GD++      + E++F+T VR V++EEE +KS+SV  VLIPVLGSEV L   +PYA +V+ ++E +K+D      S+Y +KGTYR LL+ P+D E + VSYS   D+++   V  L+ + NR ET
Sbjct:    1 MPITESDVGITEFLSYHRPFRAILKQRINDFVVNEVTRSGKIAKLTRLAQFQSK----PSPREHETTAADNAGNQSTQPAFEALEACF---EEPQRASISDLIRKAIDSQESEVVLPICTDKQRRTAMHVWVRNNIPQYITDTVTREVDDTQGQAVRLRLKKSCRPWKRRRTDSLFN----TDAVDAATYDPREGKHLPHKHREWREDAPPQVTRQTYVQFVLWKRNKDTMDALNTLSKILRVPSSAFAYAGTKDKRAVTTQLVQVRGVSESRFAHANRTITRRERGGRSIAVGDVEILPKETKGSLGLGDLKGNRFTLALRDLDLATEDDRTNVQAAVESVRKHGFVNYFGLQRFGSGVSGTHETGFAFLRGDFEDVCRRILLPLRLNEWDENGRDGIRPERRQMNDALEKFGKREISAKDLLRVLPKWMHIETAIVSSFVHDEDHERDRYDYRAAFDKLPRNLRRMYGHAVQSYLWNVIASERIRMCRPDEQSRMHAIKGDIVLMNPEEKGEMNFETAVRVVSEEEERQKSVSVFQVLIPVLGSEVSLSHGMPYAERVQGMMEEQKIDLANRLTSDYGMKGTYRPLLSQPEDVEMEIVSYSSSSDVLIEPYVPTLLGK-NRGET 614          
BLAST of Ggra3488.t1 vs. uniprot
Match: M2XQ28 (tRNA pseudouridine synthase D n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XQ28_GALSU)

HSP 1 Score: 230 bits (586), Expect = 6.150e-61
Identity = 191/650 (29.38%), Postives = 311/650 (47.85%), Query Frame = 0
Query:    3 VTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTT----LPRASPKRPRPPSPSPSSIPFSEIDQFFPSPDPPPSAALSAAISEASTSH-----------AFPVLKDKHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRNSFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRD------DSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLR-----------IGQD-DTKMNPGRK---RFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASER----------------IGLSKPDS--TNNKHAI--EGDLIAEAD-----VSEEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFKT--HAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEALVAE--LNRKET 587
            VTE  V I   +S H  F A+++    DFIVNE+S    VL+L       P A  +  +  + + +     ++++++  P          A  E+++               P+L DK  R ++HQ  R +    V +T+ TD    + + R S   P KRRRR SD N                            N F++F+L KKN +T+  ++ L   L      F +AGTKDKRG+TTQ +++RGV    L +     L +  +   + +G            L LG+LKGNRFT++LR+V +  D      ++I+ A   ++  GFINYFGLQRFGSG  P+H  GF +LRG+F++V R IL P             +G+    K + G+K   + ++ L QF +G++ A Q+ S L  +  IER +++++  +        D++ AF  LP+ L+ MY HAVQSY+WN MAS R                +  +  DS  T N  ++  EGD+ + AD     V E        ++ V++EE   K   +  V +P++G++++ P     +    ++E   +DF++      E+Q +G YR+L+++PK  E  F+ Y +    +   E +    +  L+RK+T
Sbjct:    4 VTEESVFIRRFVSEHNGFTAIVRHLYSDFIVNEVSVDGNVLQLEKEDLQKPDALEREKQVENETCTQSALEQLEKWY-EPSLMNKVRDFVATEESNSLENEQDSLKELILPKPIL-DKEERRQIHQLFRSF-KGIVTETVSTDGSPKILLERSSAVTPNKRRRRISDSN-------------------------LEENKFLSFLLCKKNTETSYVVSKLASLLHIRTGRFSFAGTKDKRGITTQEMRVRGVTMERLWQVGHSYLGKSSH---IRIGRFKYCKEP----LHLGELKGNRFTVILRNVLDCEDTDSRQLENIKEAIERVKMNGFINYFGLQRFGSGAIPSHHVGFEILRGNFEQVNRLILTPYDPEWRAIHASEILGESISVKSHHGKKDRPQIMEYLHQFCQGQLNAGQVYSHLPRFMTIERQLLNTYMKNGPN-----DHKGAFSSLPKGLKKMYVHAVQSYIWNAMASARMDSQYDRQFAMAGDLVLDQTVQDSLRTENNRSVSTEGDMESIADYEDLDVVESSEILDKNIKIVSEEEALEKKYPITQVYLPLVGTQMKWPQNECGQIAMSLLEEHSIDFQSLPTISQEFQFRGGYRKLISIPKQVEYHFMDYDEPNQSLTDIEEKLFSTQVPLDRKQT 613          
BLAST of Ggra3488.t1 vs. uniprot
Match: A0A5J4YSD7 (Putative pseudouridine synthase n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSD7_PORPP)

HSP 1 Score: 212 bits (539), Expect = 3.150e-54
Identity = 149/412 (36.17%), Postives = 233/412 (56.55%), Query Frame = 0
Query:  188 VNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDV---EEGRDD------SIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPL--RIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQR---IERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIGLSKPDSTNNKHAIEGDLIA-----EADVS---EEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFKT--HAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEV 575
            V FVL K+NRDT + L  + + L+  V     AGTKDKR +T Q V +RG     + + N  L  RD       VGN +LA T +   L LGDL GN+FT+VLR +   E+  DD      +I+ A  ++   GFINYFGLQRFGSG   THV GF VLR DF + CR I+ P     G    ++ P R+  ++ +  F +  I+A + L  L   +    +E+ +++S++   ++G  + D++ AF  +P  LR MY HAVQS+LWN MA+ R+   +P     ++A  GDL+      + DV+   E +LSF+ +VR V  + +ER  IS+H V++P++G +V  P+      +  ++E  K+D      A +E+ + G+YRRLL+  +D +  FV+Y +++  ++ +E+
Sbjct:  252 VEFVLAKRNRDTHDVLCSVAKLLNVPVSRLSTAGTKDKRAITFQFVVVRGFSPERILQLNGAL--RDAR-----VGNANLAKTGR---LALGDLLGNKFTIVLRALSGREKSEDDVPHLRSTIERAIRNVSTRGFINYFGLQRFGSGAYATHVIGFEVLRNDFAKACRMIMTPFDPTDGDPSKQIYPEREAKLKVMHSFLDNTISAQEALRTLPACRGNGGLEKRLLESYS---KQG-GIVDHKAAFSAIPFNLRKMYVHAVQSFLWNSMATVRM---QPGRCR-EYAEPGDLVVANKVGDLDVASSFEVDLSFRAQVRVV--QPDERNQISIHQVVLPMVGYDVLRPAGEVGEALSALLEKHKVDLSAANSAVTEFNLIGSYRRLLSFAQDVQFDFVTYCNEKVDLISTEL 643          
BLAST of Ggra3488.t1 vs. uniprot
Match: A0A328E1B5 (TRUD domain-containing protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328E1B5_9ASTE)

HSP 1 Score: 210 bits (534), Expect = 1.700e-53
Identity = 202/679 (29.75%), Postives = 322/679 (47.42%), Query Frame = 0
Query:    2 PVTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASP----KRPRPPSPSPSSIPFSEIDQF-----FPSPDPPPSAALSAAISEASTSHAFPVL---KDKHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRN--SFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIG-------------LSKPDSTNNKHAI---------------EGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAE--KLDFKTHAKSEYQVK---GTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEALVAELNRKETTSHGNSTKKNEESMSKRVNCVSDPQGPNEGQKIQEKMDAEVINGEI 633
            P+ E+DV I+  +S    FR +LKQ   DFIVNE+  +  V+ LT+L         K  +  +P   S   +EI+ F       S      + +    S A  S    +L    DK  RT++H ++++ +   V DT+   D     IR R +    + R ++S K    G +P     YD R       + +P++   F+ F L+K+N+DT +AL ++ + L    + F +AGTKDKR V+TQ V +   +   LA  N KL+        + VG+   A+      L LG L GNRFT+ LR V    DD I+ ++ ++ + GFINYFGLQRFGSG  PTH+ G  +LRG++K     IL P R G+ D  ++  R+ + +  D         C +++E        RAI+     ++       +Y +A   +PR LRMMY H+ QSYLWN   S R+              L K + T N+ +                  D ++E D+ EE       V+ V +E+ +  + SV +V++P+ GS V  PS   A+   ++ E +  KL   TH   E+ +    G YRR+   PK+FE + +SY+D    +V ++ + ++A+  R        S K  +E     +  ++DP+      K  ++  AE  + +I
Sbjct:   42 PIEESDVGISCFISQLPRFRGILKQRYSDFIVNEVDLEGNVVHLTSLDAPQEVHEEKEVKVTNPLDRSY-ANEIESFRSLATCDSDSDKLKSFIDKISSGADVSDEHILLTPSSDKSRRTEIHNFIKEKMRFLVTDTVDGPDNSSKCIRVRLNVGGNRGRGKNSRKRKDRGEKP-----YDSRG-----SDHWPQDLGKFLRFHLYKENKDTQDALGLIAKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRANKLAALNEKLI-------GIKVGDFCYANEG----LLLGQLYGNRFTITLRGVIAESDDIIKASAAALGKNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKAAVNMILDP-REGEKDV-VSKVREYYKETSDIDGTLRQIPCHMVAE--------RAILQCLKKNQA------NYLQALKGIPRTLRMMYVHSYQSYLWNHAVSFRVQKHGFDQVVVGDLVLCKENCTGNETSYFECENGSENATNDNTNTDEVSETDIPEE---TNILVKVVNEEDVKSGTYSVDDVVLPLPGSRVIYPSNEIAKVYHDLAEKDGIKLAECTHNVKEFSITSMTGGYRRVFQKPKEFEWELLSYTDGTQPLVETDWD-IIAKSMRNSQVKGSESVKGKDEVA---IGIIADPKNVEAENKHDQEPGAEPDDKDI 675          
BLAST of Ggra3488.t1 vs. uniprot
Match: A0A8C6S3V6 (Pseudouridine synthase 7 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6S3V6_9GOBI)

HSP 1 Score: 207 bits (526), Expect = 2.920e-53
Identity = 173/593 (29.17%), Postives = 279/593 (47.05%), Query Frame = 0
Query:    3 VTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASPKRPRPPSPSPSSIPFSEIDQFFPSPDPPP--SAALSAAISEAST------SHAFPVLKD-KHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRN--SFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSH-LRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERI---GLSKPDSTNNKHAIEGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFKT--HAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEAL 578
            +TE DV IT+ +S H+ F  +LK+   DF+V+EI+++ + + L  L                SIP  E  +    PD P   +      + E         S +  VL+D K  RT++H+ V+   P     T   D  + +     +  +                          PR+H       +P+N  SF +FVL+K+N+DT +A+ +L + +      F Y GTKDKR +T Q + +  V    LA  N  L+            N+ L + S  +H L+LG+L+GN FT++LR++  G DD +  A NS+R+ GFINY+G+QRFG+   PT   G A+L+ D+ EV   ILLP R G +   +   R+ + ++ D  A         L +L   + +E  ++   +   ++ +      +AFG +PR  R+MY H+ QS LWN M S RI   GL KP        +EGDL+     +                 EE  + S+H++++P+ G +V  PS       +E++ A+ LD     H   +Y + G YRR++  P D   + + Y D R+ +V +++E L
Sbjct:   59 LTEVDVGITKYISDHEGFSGILKERYSDFVVHEINKEGKTVHLDDL----------------SIPLDETPESSQPPDEPDVLTEEQRTQLGELQLFKNKEGSVSIEVLEDSKEKRTRVHKAVKTQFPGLETKTEDRDGRKFIVAYHAAGKKHLS-----------------------PRKHF------WPKNRGSFCHFVLYKENKDTMDAINLLSKFIRLKPNLFSYMGTKDKRAITVQEIAVLKVTAERLAHLNKCLM------------NLKLGNFSYKNHPLKLGELRGNHFTIILRNIT-GSDDQVNKAMNSLRDTGFINYYGMQRFGTTAVPTFKVGKAILKNDWNEVVDLILLP-RPGAEKEFLVRCREEWAKSRDPEAA--------LKKLPNKRCVEGQLLRGLSMYGKKNIV-----QAFGLIPRNNRLMYIHSYQSVLWNTMVSRRIEAFGL-KP--------VEGDLMLRGTTAH------------VLSAEEAATHSIHDIVMPLPGFDVIYPSHHVGSGYREMLSADGLDIDNMRHKIKDYSLAGAYRRVVIRPSDVSWEVIQYDDPRNPLVHTDIEKL 558          
BLAST of Ggra3488.t1 vs. uniprot
Match: A0A4Y2GH92 (Pseudouridylate synthase 7 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2GH92_ARAVE)

HSP 1 Score: 207 bits (526), Expect = 3.080e-53
Identity = 187/589 (31.75%), Postives = 287/589 (48.73%), Query Frame = 0
Query:    4 TEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASPKRPRPPSPSPSSIPFSEIDQFFPSPDPPPSAALSAAISEASTSHAFPVL-KDKHSRTKLHQWVRQYLPSFVGDTLQTDD-GQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRNSFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIG-----LSKPDSTNNKHAIEGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVH--NVLIPVLGSEVQLPSVP----YARKVKEI-IEAEKLDFKTHAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEAL 578
            +E DV ITE LS    F+A++K+   DFIVNEI  +  V+RLT L +  PK P       S +   ++D      D      +   IS+  +     V  KDK +R ++H  +R+    F G    T+D G    I  +  T+  KRRR                            + S   N +++FVL+K+N+DT +A+  +   L  N K F YAG+KDKRG T+QLV    +          +LL+ + +  +V VGN+      K+  L+LGDL+GNRF ++LR ++ G  + I+ A NS+   GFINY+GLQRFG+   PTH  G  VLR  +K+    IL P   G D+  +N  ++ + +  D        A   L  L     IE  ++   AS  +R     D+  AFG +PR +R+MY H+ QSY+WN +AS+RI      + K D    +  +   L+   +  +EE + K  +  + K   E + +  H  +VL+P+ G  V  P       Y+  +KE  +E    D K  A S   + G YR+L+ VP+D + + + YSD    +V S+++ L
Sbjct:   57 SEQDVGITEYLSDLPEFKAIMKERYSDFIVNEIDTEGNVVRLTNLEK--PKNPE------SDL---KVDGLL---DDATVKGIEELISDERSEVEINVTEKDKDTRKEIHVAIRKM---FNGVESSTEDRGPEKFILVKKFTKQKKRRR---------------------------CQLSVGGN-YLHFVLYKENKDTMDAINGIASFLRVNPKVFAYAGSKDKRGKTSQLVSAYQISP-------ERLLKINNDFNTVRVGNIVF----KNEQLKLGDLRGNRFVIILRQLQ-GDPNIIEKAINSLSTKGFINYYGLQRFGTSSVPTHSIGRLVLRSQWKDAINLILTPRSEGDDE--LNEAKRIWAKTED--------ANLALKNLRRKSSIEGKLLCGLASSHKR-----DFCNAFGAIPRNMRLMYLHSYQSYIWNKIASKRIKEYGWKVLKGDLVPREAGV---LVDNCEEDKEEGNRKAMLESIVKVIAEDEVVKYHISDVLLPLPGHSVVFPDNETKDWYSEFLKEDGMEWSDFDSKVKANS---LSGAYRKLIVVPEDVKWEIIPYSDVTKSLVLSDLDRL 567          
BLAST of Ggra3488.t1 vs. uniprot
Match: D8R301 (TRUD domain-containing protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R301_SELML)

HSP 1 Score: 207 bits (528), Expect = 3.490e-53
Identity = 201/641 (31.36%), Postives = 293/641 (45.71%), Query Frame = 0
Query:    5 EADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASPKRPRPPSPSPSSIPFS------EIDQFFPSPDPPPSAALSAAISEASTSHA---------FPVLKDKHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIR----RRSDTRPWKRRRRDSDKNDQNGAQPQQD-DTYDPREHHNQYENSFP--RNSFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRI-ERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERI------------GLSKPDSTNNKHAIEGDLI---------------------AEADVSEEELSF------KTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFK--THAKSEYQVK---GTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEAL 578
            E DV I    ++   FRAVLKQ   DFIVNE+     V+RLT+L        R  +   ++  FS      ++D F        +  +   + + S   A             +DK SRTK+H + R+ +P  + DT+  +    +R+R      SD R  KR R    K      + +QD D +D R       N +P  R+ F  F L+K+N+ T  AL ++ + +    K+  +AGTKDKR VTTQ V +       LA  N  L         + +GN S         L LG+L GNRF ++LRDV    +++I+ A+  +   GFINY+GLQRFGS   PTH  G  +L+GD+K     ++L  R G D       RK F  A      G   A +L+    P   I ERAI+     D        +Y +A   +PR +RMMY H+ QSYLWN  AS RI            G+     T     +EGDL+                      + DV E++         + KV+ VT E+   K  ++ +V++P++GS    PS   A    +I + E +D K  TH   E+ V+   G YR LL  P DFE +  SYSD R+ +  ++++ L
Sbjct:    3 EKDVGILCFANSFPGFRAVLKQRYSDFIVNEVDLDGNVVRLTSLTAPPEDETRSEA---AAAEFSVASYEAQLDAFKELAGEENARIVKQLLDKISPEQADDGNALVETLTPNEDKGSRTKVHAFFRERMPMLITDTVADNR---IRVRYGGGSASDDRAGKRNRSWKGKRGYESKRQRQDGDKFDRRA-----GNYWPADRHKFCQFYLYKENKTTQSALMIVAQKIGVKAKNMGFAGTKDKRAVTTQRVTVYKHSATQLAALNKSLF-------GIKLGNFSYVEKG----LVLGELSGNRFNVILRDVVAESENAIKEAAEGMGNSGFINYYGLQRFGSCGVPTHAIGAKLLQGDWKTAVD-LILQEREG-DQQAAEESRKIFKTA------GPAEALKLM----PHHMIAERAILLGLKKDPA------NYLQAIQNIPRPMRMMYVHSYQSYLWNSAASARIQKYGNPLLSFSNGVKDVAFTGVDAVVEGDLVYCQEDEISKEAGKDDVELEDLVDTDVLEDDARMELARPSRKKVKHVTAEDIALKKYAITDVVLPLVGSTTVYPSNDVADVYNKITKMESIDLKSCTHNVKEFSVEYLTGAYRNLLVKPIDFEWRLSSYSDSRNPLTKTDMDLL 603          
BLAST of Ggra3488.t1 vs. uniprot
Match: A0A8C4RK56 (Pseudouridine synthase 7 n=11 Tax=Polypteridae TaxID=8289 RepID=A0A8C4RK56_ERPCA)

HSP 1 Score: 207 bits (528), Expect = 4.480e-53
Identity = 179/590 (30.34%), Postives = 280/590 (47.46%), Query Frame = 0
Query:    3 VTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLT--TLPRASPKRPRPPSP---SPSSIPFSEIDQFFPSPDPPPSAALSAAISEASTSHAFPVLKD-KHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRN--SFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSH-LRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERI---GLSKPDSTNNKHAIEGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFKT--HAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEAL 578
            +TE DV I + +S H+ F  +LK+   DF+V+EIS+Q  V+ L   T+P  +   P   S            E+ QF                    +S +  V++D K  RT LHQ V+   P     T + D G+ +     +  R             +  A P       PR+H      S+P+N  SF + VL+K+N+DT EA+ +L + L      F Y GTKDKR +T Q + +  +    LA  N  L+            N  L + S   H L+LG+L+GN+FT+V+R++  G D+ I  A  S+R+VGFINY+G+QRFG+   PT+  G A+L+ ++KEV   IL P R G +   +   R+ +  + D  A         L +L   + +E  ++   A   +  +       AF  +PR  R+MY H+ QSY+WN M S RI   GL          A+EGDL+         L   T V P++  E      S+H +++P+ G +V  P+       +E+++ + LD     H   +Y + G YR++L  PKD   + ++Y D +  +V ++VE L
Sbjct:  117 LTEMDVGILKYVSTHEGFSGILKERYSDFVVHEISKQGSVVHLDDLTVPMDAEDAPIDVSQVLTEEQKQDLEELQQF----------------KNKESSVSIKVIEDTKEKRTLLHQAVKSLFPGLETKTEERDGGKYIVAYHAAGKRALA----------EVSAAPA------PRKH------SWPKNRGSFCHCVLYKENKDTMEAINLLSKFLRVKPNIFSYMGTKDKRAITVQQIAVLKISAQRLAHLNKCLM------------NFRLGNFSYQKHPLKLGELQGNQFTVVIRNIS-GTDEQIHKALTSLRDVGFINYYGMQRFGTTAVPTYEVGRAILQNNWKEVMDLILKP-RPGAEKGYLVRCREEWANSQDPEAA--------LKKLPVKRCVEGQLLRGLAKYGKNNIVT-----AFSTIPRNNRLMYIHSYQSYVWNNMVSRRIEEFGLK---------AVEGDLV---------LHGATAV-PISASE--ANQYSIHEIVMPLPGFDVMYPTHKVGAAYREMLQVDGLDIDNMKHKIRDYSLSGAYRKVLIRPKDVHWEVIAYDDPKIPLVQTDVEKL 620          
BLAST of Ggra3488.t1 vs. uniprot
Match: pseudouridylate synthase 7 homolog n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A2340 (pseudouridylate synthase 7 homolog n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A2340)

HSP 1 Score: 207 bits (527), Expect = 9.070e-53
Identity = 183/606 (30.20%), Postives = 276/606 (45.54%), Query Frame = 0
Query:    5 EADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPRASPKRPRPPSPSPSSIPF-------SEIDQFFPSPDPPPSAALSAAISEASTSHAFPVLKDKHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRRRDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRNSFVNFVLWKKNRDTTEALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKLLQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDDSIQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILLPLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIVDSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIGLSKPDSTNNKHAIE---GDLIAEADVSEEELSFK------------------TKVRPVTKEEEERKSISVHNVLIPVLGSEVQLPS----VPYARKVKEIIEAEKLDFKTHAKSEYQVKGTYRRLLAVPKDFESKFVSYSDKRDIVVPSEVEAL 578
            E DV ITE +S+   F A++KQ   DFIVNEI ++ +++RLT+L     + P       + +          ++D F  +P+P     + A +             DK +R K+HQ VR        DTL  DD + +RI  +     W   +    +N Q    P     Y                    FVL+K+N DT EA+  L +    N   F +AGTKDKR +T+Q V +  V+   L  AN       R    + +GN           L+LG L GNRFT+VLRDV  G D+ I +A  S++  GFINYFG+QRFG+   PT+  G  +L+ ++KE    IL P           PG K F+    +    +    Q+L  L     IERA+++             +Y  AF  + R  RM+Y H  QSY+WN +AS+RI          K  +E   GDL+ + D+ +  ++FK                  ++V P     E     ++H+V++P+ G +VQ P     + YA+ + E  +  KL+   H+   Y + GTYRRL+ +PKD   +   YSD    +  S+++ L
Sbjct:   93 EGDVGITEYISSSPGFSAIIKQRYSDFIVNEIDEEGRLVRLTSLEVDRSQMPADEEDDDTGLDGVLSPEQKEKLDDFNANPNPKRVIDICAPV-------------DKVTRGKVHQIVRVRYKKLESDTLVEDDVRFIRISVKGAGGHWGSGQHFRQQNFQRKPWPAGFGNY------------------CRFVLYKENMDTMEAVHKLTKFFHINKNMFQFAGTKDKRAITSQEVTVYRVKAEKLVGAN-------RYFYKMALGNFRYVEQP----LKLGQLSGNRFTIVLRDVT-GTDEVIDSALQSLKTNGFINYFGMQRFGTTAIPTYRVGKELLKSNYKEAGELILQP----------RPGEKDFITECRKNWWKDKNCTQMLKVLPRKYNIERALLEGLIKFGEN-----NYANAFQMIHRNTRMLYLHGYQSYIWNHVASDRI---------KKFGMEPMVGDLVYKGDLKD--VAFKEENRQSSANGSLKGGSTSSRVSPEVVTAETLSQYTIHDVILPLPGFDVQYPDNEVGLWYAKLMAE--DGLKLEDLKHSNKNYALPGTYRRLIILPKDLMWQSYMYSDVTKELTQSDLDLL 627          
The following BLAST results are available for this feature:
BLAST of Ggra3488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4F02.090e-24948.08Pseudouridylate synthase 7-like n=1 Tax=Gracilario... [more]
R7QPW36.980e-15446.17TRUD domain-containing protein n=1 Tax=Chondrus cr... [more]
M2XQ286.150e-6129.38tRNA pseudouridine synthase D n=1 Tax=Galdieria su... [more]
A0A5J4YSD73.150e-5436.17Putative pseudouridine synthase n=2 Tax=Porphyridi... [more]
A0A328E1B51.700e-5329.75TRUD domain-containing protein n=1 Tax=Cuscuta aus... [more]
A0A8C6S3V62.920e-5329.17Pseudouridine synthase 7 n=1 Tax=Neogobius melanos... [more]
A0A4Y2GH923.080e-5331.75Pseudouridylate synthase 7 n=1 Tax=Araneus ventric... [more]
D8R3013.490e-5331.36TRUD domain-containing protein n=6 Tax=Selaginella... [more]
A0A8C4RK564.480e-5330.34Pseudouridine synthase 7 n=11 Tax=Polypteridae Tax... [more]
pseudouridylate synthase 7 homolog n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A23409.070e-5330.20pseudouridylate synthase 7 homolog n=1 Tax=Crassos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20TruD, catalytic domaincoord: 393..606
e-value: 1.1E-23
score: 86.0
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20TruD, catalytic domaincoord: 153..351
e-value: 4.0E-41
score: 142.1
IPR001656Pseudouridine synthase, TruDPIRSFPIRSF037016Pseudouridin_synth_eukcoord: 82..952
e-value: 3.7E-100
score: 334.1
coord: 1..77
e-value: 2.2E-4
score: 17.5
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 184..559
e-value: 2.3E-53
score: 181.5
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 3..950
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..603
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..775
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..912
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..873
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..701
NoneNo IPR availablePANTHERPTHR13326:SF21PSEUDOURIDYLATE SYNTHASE 7 HOMOLOGcoord: 3..950
NoneNo IPR availableCDDcd02576PseudoU_synth_ScPUS7coord: 185..562
e-value: 5.56713E-83
score: 270.637
IPR011760Pseudouridine synthase, TruD, insertion domainPROSITEPS50984TRUDcoord: 312..552
score: 26.523388
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 7..938

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:468576..471434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3488.t1Ggra3488.t1Gracilaria gracilis GNS1m malemRNAtig00000059_pilon 468576..471434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3488.t1 ID=Ggra3488.t1|Name=Ggra3488.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=953bp
MPVTEADVAITERLSAHKPFRAVLKQSVDDFIVNEISQQHQVLRLTTLPR
ASPKRPRPPSPSPSSIPFSEIDQFFPSPDPPPSAALSAAISEASTSHAFP
VLKDKHSRTKLHQWVRQYLPSFVGDTLQTDDGQVVRIRRRSDTRPWKRRR
RDSDKNDQNGAQPQQDDTYDPREHHNQYENSFPRNSFVNFVLWKKNRDTT
EALTMLGRALSRNVKHFFYAGTKDKRGVTTQLVQIRGVQEGDLARANSKL
LQRDRNRASVLVGNVSLASTSKSSHLRLGDLKGNRFTLVLRDVEEGRDDS
IQTASNSIREVGFINYFGLQRFGSGVSPTHVTGFAVLRGDFKEVCRRILL
PLRIGQDDTKMNPGRKRFVQALDQFAEGEITACQLLSELAPWQRIERAIV
DSFASDERRGVDVPDYRKAFGRLPRFLRMMYGHAVQSYLWNVMASERIGL
SKPDSTNNKHAIEGDLIAEADVSEEELSFKTKVRPVTKEEEERKSISVHN
VLIPVLGSEVQLPSVPYARKVKEIIEAEKLDFKTHAKSEYQVKGTYRRLL
AVPKDFESKFVSYSDKRDIVVPSEVEALVAELNRKETTSHGNSTKKNEES
MSKRVNCVSDPQGPNEGQKIQEKMDAEVINGEIGKDGGSPTVEHGEKRDG
APQEHEVGESQSKESSKEDAHDGKDSVAQEMELEAVESDAGQEHASESVD
IPKESQKGVGDNPADGGISKDESAEQSKDEAIGLEEGEGTEATGKDEASG
DVQIEDTAKDQKGDQAKENTEAIEAKDASINKSTDIGLVAKDEVDGQQGT
GEAKENKDVSDGSGAVPVTQEVSEGEAIGSDAVRLVQNIEEQTVPGKVSK
EQPDEKNVLVEDASHDKAEDASGNDVVPHQLPASMEVGGNINVESGYLSK
SDRDEGNGEGKPRRALIISFSLGCAEYATMLVRELTGYESSTAAQKALQT
SL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD
IPR011760PsdUridine_synth_TruD_insert
IPR020103PsdUridine_synth_cat_dom_sf