Ggra3431.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3431.t1
Unique NameGgra3431.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length236
Homology
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A812PBX3 (Cbh protein n=2 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812PBX3_9DINO)

HSP 1 Score: 110 bits (274), Expect = 9.470e-25
Identity = 70/215 (32.56%), Postives = 101/215 (46.98%), Query Frame = 0
Query:    3 IHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVG-----GTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFNE 212
            +HW I +PSG   I+EY+  Q + H + + V TNDP   WH +NLN   ++    P     MQV     V       VVP  + HG   + LPGDT+ PSRF+ L+YLR  +    P +++ +A+ L T L+N V IPFG        G +D +                    TD       V + PK  V   R Y +   + +DL +LDF++
Sbjct:  161 LHWAIADPSGRSIIVEYIQGQRMIHENTLRVMTNDPDIKWHWRNLNTRIHLSPSFPYQNEFMQVKADDEV------GVVPRAMGHGYNLVGLPGDTTSPSRFIRLFYLRGYSMEAMPIKSFDDAVVLGTGLLNNVWIPFGPAAKDPRAGPSDGAEF------------------TDY-----GVLKAPKEKVYLIRAYRNTQWRKVDLKRLDFSK 346          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A812GS43 (YxeI protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812GS43_9DINO)

HSP 1 Score: 108 bits (269), Expect = 5.210e-24
Identity = 68/210 (32.38%), Postives = 99/210 (47.14%), Query Frame = 0
Query:    3 IHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFNE 212
            +HW I + SG   ++EYL  Q + H +   V TNDP   WH +NLN   ++    P     +QV    +V       VVP  + HG   + LPGDT+ PSRF+ L+YLR  A   +P +++ +A+ L T L+N V IPFG V     +      +              TD       V + PK  V   R Y +   +  DL +LDF++
Sbjct:  166 LHWAIADASGRSIVVEYLQGQRMIHENAPRVMTNDPDIKWHWRNLNTRVHLSPSYPYQNDMLQVKADDDV------GVVPRPIGHGWNLVGLPGDTTSPSRFIRLFYLRGYAMEASPIKSFEDAVVLGTALLNNVFIPFGPVAADPRAGPSDGPE-------------FTDY-----GVLKAPKERVYLIRGYRNTQWRKFDLKRLDFSK 351          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A1Q9F3X3 (Cbh protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9F3X3_SYMMI)

HSP 1 Score: 107 bits (267), Expect = 4.130e-23
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 0
Query:    2 GIHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFNETAS 215
            G+HW I + SG   I+EY+  + V   +   V TNDP   WH +NLN +  +    P     +QV    +V        VP  V HG     +PGD+S PSRFV L+YLR       PP+++ +A+ L T L+N V IPFG+V     S                        +L    V + P+  V+  R Y +   + IDL ++DF++  S
Sbjct:  373 GLHWAIADSSGRSIIVEYIQGKRVVLENHPRVMTNDPDIKWHWKNLNAHVQLSPTYPLQNDFLQVQTEDDV------GAVPRPVGHGWNLYGIPGDSSSPSRFVRLFYLRGYGMKANPPKSFEDAVVLGTALLNNVFIPFGSVAADPRSPG-------------------DGPELTDYGVLKSPQERVMLMRGYRNSQWRKIDLKRVDFSQAKS 561          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A812YFQ5 (Cbh protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812YFQ5_9DINO)

HSP 1 Score: 106 bits (265), Expect = 5.080e-23
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 0
Query:    2 GIHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFNETAS 215
            G+HW I + SG   I+EY+  + V   +   V TNDP   WH +NLN +  +    P     +QV    +V        VP  V HG     +PGD+S PSRFV L+YLR       PP+++ +A+ L T L+N V IPFG+V     S                        +L    V + P+  V+  R Y +   + IDL ++DF++  S
Sbjct:  252 GLHWAIADSSGRSIIVEYIQGKRVVLENHPRVMTNDPDIKWHWKNLNAHVQLSPTYPLQNDFLQVRTEDDV------GAVPRPVGHGWNLYGIPGDSSSPSRFVRLFYLRGYGMKANPPKSFEDAVVLGTALLNNVFIPFGSVAADPRSPG-------------------DGPELTDYGVLKSPQERVMLIRGYRNSQWRKIDLKRVDFSQAKS 440          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A7S4GP42 (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S4GP42_OXYMA)

HSP 1 Score: 102 bits (254), Expect = 5.150e-22
Identity = 66/210 (31.43%), Postives = 99/210 (47.14%), Query Frame = 0
Query:    2 GIHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFN 211
            GIHW + +P+G   +IEYL  ++V + +   V TNDP   WH +NL+ Y  +    P     + VD         V SV P  V HG     LPGD+S PSRFV ++YLR  A  +       +A+AL+T ++N +  P G+V                    K   ++    +     V +VP   +V +R Y +   + IDL K++FN
Sbjct:  148 GIHWALHDPTGRSIVIEYLKGEMVVYNNTPRVMTNDPDLHWHWRNLDTYVNLNPSFPHQNDFLAVD-------TEVGSV-PSAVGHGWNLFGLPGDSSPPSRFVRMFYLRGYALKHTKVNTTSDAMALSTVMLNNLMFPTGSVA-------------------KDPKVLTDPYETVPYAVIKVPSEKLVVFRGYRNTQWRQIDLKKVNFN 330          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A0Q9YPT2 (Choloylglycine hydrolase n=1 Tax=Candidatus Berkiella aquae TaxID=295108 RepID=A0A0Q9YPT2_9COXI)

HSP 1 Score: 70.5 bits (171), Expect = 1.520e-10
Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 0
Query:    3 IHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANA--PPQNYLEALALATNLINAVAIPFGT 143
            +H+ I + SG+Q ++EY+ N +  + + + V TN P + WH+ NL  Y  + A              +N+  + +  V  E +  G G   LPGD S PSR     Y+RS+A  ++  P +   E + L+ ++IN   IP GT
Sbjct:  166 LHFRITDASGDQIVVEYVQNGMKIYDNPLGVITNSPEFDWHLTNLRNYMNLSA--------------TNLPSLKIEGVKLEPLGQGEGMHGLPGDYSPPSR-----YIRSMAIQSSALPVKTAEEGVNLSWHIINNTDIPIGT 289          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A812Y6Y7 (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y6Y7_SYMPI)

HSP 1 Score: 70.5 bits (171), Expect = 1.660e-10
Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = 0
Query:   80 VVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFNETAS 215
            VVP  V HG     LPGD+S PSRFV L+YLR       PP+++ +A+ L T L+N V IPFG+V   AD     +  +                      + + P+  V+  R Y +   + +DLN+LDF++  S
Sbjct:  186 VVPRPVGHGWNLFGLPGDSSSPSRFVRLFYLRGYGMKANPPKSFDDAVVLGTALLNNVFIPFGSVA--ADPREPGDAPEYTPY-----------------GILKSPQERVMLIRGYRNSQWRKLDLNRLDFSQVRS 302          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A7Y6WSP6 (Linear amide C-N hydrolase n=2 Tax=unclassified Myxococcus TaxID=2648731 RepID=A0A7Y6WSP6_9DELT)

HSP 1 Score: 66.2 bits (160), Expect = 4.170e-9
Identity = 63/235 (26.81%), Postives = 99/235 (42.13%), Query Frame = 0
Query:    3 IHWGIVEPSGEQYIIEYLNNQLVWHR---SDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIEKHIDLNKLDFNETASVKTKKVYDAQESFGVESDL 234
            +H+ + +  G   ++E++  ++  +    + V V TN P +   ++NL  Y  + A          +D+      V + S   E    G+G + LPGD++ PSRFV + YLR   +A   P N  EA  LA +L+N V IP GT    AD    +     R   +  V+  LT+               V+  R Y  +  + +DL  LDF   A  K   V    E   +   L
Sbjct:  145 LHFPVHDAKGNSLVVEFIGGEMNLYTGKDNPVGVLTNHPTFPEQLENLKNYAQLTA--------YDIDK------VTLGSATFEPHGCGSGMLGLPGDSTPPSRFVRVTYLR---QAALQPTNASEARLLAFHLLNTVDIPLGTSRKHADKPEHEK----RDYTQWVVAKDLTN--------------RVLNIRFYDSLAVQSVDLKSLDFAVAAKRKAVDVPPINEGVDITQAL 344          
BLAST of Ggra3431.t1 vs. uniprot
Match: linear amide C-N hydrolase n=1 Tax=Desulfosporosinus sp. FKB TaxID=1969835 RepID=UPI000B49D0A3 (linear amide C-N hydrolase n=1 Tax=Desulfosporosinus sp. FKB TaxID=1969835 RepID=UPI000B49D0A3)

HSP 1 Score: 64.7 bits (156), Expect = 1.320e-8
Identity = 40/141 (28.37%), Postives = 70/141 (49.65%), Query Frame = 0
Query:    4 HWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTV 144
            H+   + SG+  I+E++N ++  + +++ V TNDP   W   NL+ Y            ++ ++   N++     S        G+G + +PGD +  SRF+   +LR  A     PQN  EA+ +A  ++  +AIP GTV
Sbjct:  141 HYIFSDTSGKHLIVEFINEKMRTYTTEMGVLTNDPQLDWQRTNLSLY-----------ENLSLENNPNLFCGAELS--------GSGQLGIPGDPTPQSRFIRAAFLRQTA---FQPQNTQEAIGIARQILQTLAIPSGTV 259          
BLAST of Ggra3431.t1 vs. uniprot
Match: A0A4Y6CXX1 (Choloylglycine hydrolase n=3 Tax=Myxococcus xanthus TaxID=34 RepID=A0A4Y6CXX1_MYXXA)

HSP 1 Score: 64.3 bits (155), Expect = 1.910e-8
Identity = 63/225 (28.00%), Postives = 99/225 (44.00%), Query Frame = 0
Query:    3 IHWGIVEPSGEQYIIEYLNNQLVWHR---SDVAVTTNDPGYSWHVQNLNRYGYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSHPSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADSSSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPK---RNVVFYRDYVHVIEKHIDLNKLDFNETASVKTKKV 221
            +H+ I +  G   ++E+++ ++  +    + V V TN P +   ++NL  Y  + A          +DQ      V + S   E    G+G + LPGD++ PSRFV + YLR  A+    P++   A  LA +L+N V IP GT        S K+ K  +              +L   T+  V K     V+  R Y  +  + +DL  LDF   A  K  KV
Sbjct:  145 LHFPIHDAKGNSLVVEFIDGEVNLYTGKDNPVGVLTNHPTFPDQLENLKNYAKLTA--------YDIDQ------VTLGSATFEPHGCGSGMLGLPGDSTPPSRFVRIAYLRQAAKQ---PEDAAAACTLAFHLLNTVDIPNGT--------SRKHAKPDKD-------------ELCDYTLWAVAKDLTNKVLNIRFYDSLAVQSVDLRTLDFATAAKRKNIKV 331          
The following BLAST results are available for this feature:
BLAST of Ggra3431.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A812PBX39.470e-2532.56Cbh protein n=2 Tax=Symbiodinium natans TaxID=8784... [more]
A0A812GS435.210e-2432.38YxeI protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A1Q9F3X34.130e-2331.78Cbh protein n=3 Tax=Symbiodinium TaxID=2949 RepID=... [more]
A0A812YFQ55.080e-2331.78Cbh protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxI... [more]
A0A7S4GP425.150e-2231.43Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID... [more]
A0A0Q9YPT21.520e-1030.77Choloylglycine hydrolase n=1 Tax=Candidatus Berkie... [more]
A0A812Y6Y71.660e-1033.82Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A7Y6WSP64.170e-926.81Linear amide C-N hydrolase n=2 Tax=unclassified My... [more]
linear amide C-N hydrolase n=1 Tax=Desulfosporosinus sp. FKB TaxID=1969835 RepID=UPI000B49D0A31.320e-828.37linear amide C-N hydrolase n=1 Tax=Desulfosporosin... [more]
A0A4Y6CXX11.910e-828.00Choloylglycine hydrolase n=3 Tax=Myxococcus xanthu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029132Choloylglycine hydrolase/NAAA C-terminalPFAMPF02275CBAHcoord: 3..153
e-value: 1.0E-16
score: 61.5
NoneNo IPR availableGENE3D3.60.60.10Penicillin V Acylase; Chain Acoord: 1..230
e-value: 2.5E-32
score: 114.4
NoneNo IPR availablePANTHERPTHR35527CHOLOYLGLYCINE HYDROLASEcoord: 3..223
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 2..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:23004..23711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3431.t1Ggra3431.t1Gracilaria gracilis GNS1m malemRNAtig00000059_pilon 23004..23711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3431.t1 ID=Ggra3431.t1|Name=Ggra3431.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=236bp
MGIHWGIVEPSGEQYIIEYLNNQLVWHRSDVAVTTNDPGYSWHVQNLNRY
GYVRAPKPDVPADMQVDQPSNVYPVPVHSVVPETVSHGTGGMDLPGDTSH
PSRFVLLYYLRSLAEANAPPQNYLEALALATNLINAVAIPFGTVGGTADS
SSLKNIKKIRSVFKKTVSLMLTDVKLAQRTVRRVPKRNVVFYRDYVHVIE
KHIDLNKLDFNETASVKTKKVYDAQESFGVESDLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029132CBAH/NAAA_C
IPR029055Ntn_hydrolases_N