Ggra3405.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3405.t1
Unique NameGgra3405.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1248
Homology
BLAST of Ggra3405.t1 vs. uniprot
Match: A0A2V3IFV0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFV0_9FLOR)

HSP 1 Score: 505 bits (1300), Expect = 3.600e-154
Identity = 458/1339 (34.20%), Postives = 642/1339 (47.95%), Query Frame = 0
Query:    1 MGDESNIAAPFSCSITVIQATGEAGKSFEFDTKNWCVLGSHQDCDIRIKHSLNAPLHALVLVRQEGIHLIGLHPDIPVHHSRTGASLTKEQEAPLLTGDSFYLGDRGFRVDYESPTVKCLKSPSQSVSDSIGPQTRSVKKTAAEKKVVHRTQSSERKRRSRRRVSLVVEADGERFVSQKRDTERLLSKTQIARLSDGEGLQTPLASVPEKSAPSDQKCSTKEGTQGSRPHSHEKSEDVQSRSEEDGKD----VRGKNSEPD----VPQREDG--MLIKETDLPE----QGKGGVNSALK------------EARSRKMSLPPTPTTRSSARMVKSVSKQGTLTARERKKLVYARLSLGLTAHPSKNEMTGGLENNVTVAFASQTSATKER--KLDMNLHKSNNQIANQEIKEKNMIRSPLTDKSPILNIQRSGKTSGGVSKECRTPSTMKTCPGSLLRSSKSTTRATKRSVAFSSKIELERGKHYSPFRPSVPRTTPFPRRSEGQSNEGTPAERGRFSFDSVVGVPHDTQNSCGKNKLEVGKDQTDAVEVFSDPSSGLEGAADSDSLTDASDCVXXXXXXXXXXXXXXXXXXXX-GAITSLLKRFSGNGDQQKTDEIAHAACATGKVHASDSKVVKLYEGKASTEPLMSVDEIQDISSSKRMSVSRRLSFLEKVFGAAAAVRNVMADTDEDSTIQDKLNENGSNMEGAVCRSDGHAISNSPSNDVRNSSGEECEEPESESKRGTASCAGTCVEGVS-QSLAQDEEQAQVDLHSSIESQP-----GLVSSDGQSVLCEPKQRLSLGN----IFERLTKGT-GEHAKSRGEV--SANDHHDSPEDYGSPNRTISCETNSIDSQDTADTFERELEIRVNRAS----------FRPHSPRHGEDVEDLEAEIQGLIAGNEVDSPLAQTPHGDIESSELDQSVRDSNADVLDGKEVLVENDEETQLEECCEDDRSDSEGSQPCTSP-EVLDTSCSRSAGR--RRSSQPAPESQKSVPELSEEAEALKEPNVLGGQTEQKDEEQ----------DLEAELNQLLVVELRERLRELNLSIAGRKAELVERLTQHIL-----QEEAELPEEPEQSTEGEVHEDI-------------------EPDE-----IEVCEHEVKEQXXXXXXXXXXXXXXXXXXXXXXXXXN--LELYRRKTVKELRQILKGRNLDIMSKLRKEELIQHMIAEGVKLPEHDQDAQSVESPSSGRVLRSTRKTRQTPSVSRRSCSTAAKGAPPTAKSLNRLTVIELRSCLREQHLCQQGTKRVLIDRILSEDQSNNQDTPANELKSNNS-CKSCQAGQGCE 1242
            M  E+ +  PF CSITVI A+G  GKSF FD+KNWCVLGSH DCDIRIKH+ +APLHALV VR++G+HL G+HP+ PV HSR+  SL KE+E  L  GD F+LG+RGFRV++E       KS  Q  S ++     +++    E+K   R+QS+ RK + +RRVSLVVE  GERFV++K D+E+LLS++Q+ARLS GEG   P   V                      H +E S  +Q  + E            N   D    +P   DG  ++I++  LP     +G    N+A              E R    S+P TPT     RM KS +K   L+AR+RK LVYARLS GL+A P K+E+   +++  TVAF++ +    E   + D   HKSN+++       K+ IRSPL DKSP+LNIQ+  K  G + KECRTPS +K  P S+LRSSKSTT+   RSVAF+++IELERG HYSPFR      TP P++     +     +    S D     P         N+ E  +   +   +       +E          A++C                      G ITS +KR SGN D   +DE       + K     S   +     AST+ +M+  EI   + S RMS +RRLSF +KV GAAAA+R V  DTD   +                C S  H +    S+   +S+  +                G    G   +      E+  ++ H+S+E  P      +  +    +L +    L+       IF++LT G  GE ++         +DH D  E  G      S +++S+ SQ TADTFERELEI V + S            P+    G++    E +       +E+D    +    D    E +  + +S  +      V+ E++  T  ++       D    QP   P    +    RS  R  RRS +  P +  +  +L  E   +  P   G      +E             L+  LN+LLVV+LR+RLRE NLS AG+KAELV RL  H+L      EE +  +E      GE+ +D+                   + DE     +E  + E+ +Q                         +  ++ YRRKTVKELR ILK +NLDIMSKLRKEELI HMI+  V+L +     +S+++P   RVLRSTR  R TP+ SR    T     P TAK++++LTV ELR+ L +  LCQ GTK+ L +R++S   S     P  +L  +NS C  C+AGQ CE
Sbjct:    1 MDKENCVEVPFHCSITVIHASGNEGKSFTFDSKNWCVLGSHPDCDIRIKHNNSAPLHALVFVREDGVHLQGIHPEEPVIHSRSAKSLIKEEELSLQPGDVFFLGERGFRVEFEKLLQSPPKSLLQPTSQTVDTPITTMRGADNERKARRRSQSA-RKAKPKRRVSLVVERHGERFVARKGDSEKLLSRSQLARLSGGEGFHKPGKVVD---------------------HENESSSCIQLSASEXXXXXXXXTASSNEMTDLSSFIPTESDGKRLMIEKLSLPRFQHTEGDKQANNASSIESRANSEPIESERRDSAFSVPHTPTNTKVERMAKSATK---LSARDRKNLVYARLSQGLSAIPRKSEV---IDSTTTVAFSTPSVGFNEHVAQNDSLDHKSNSKVNRIS---KSPIRSPLVDKSPLLNIQQGSKLRGSIKKECRTPSLLKKTPASVLRSSKSTTKTKSRSVAFAARIELERGTHYSPFRSKQFPRTPVPKQEPAVLSRVASKKSALSSTDQP---PKPMALKQISNEFEANEGVVNGSSLSGCQDDTVENQVLKQRAEAAAECTALSEPEKLLKPQQEASTSSFKGVITSFIKRLSGNMDDD-SDE-------SDKSVDEQSSGARDSRSTASTDAVMTPTEIAHFTGSNRMSTTRRLSFFDKVLGAAAAMRQVTEDTDPSDS----------------CASSMHEVQIGDSSPTASSANHD---------------EGDLTTGADMKDFLPTSERGGIESHTSLERTPDGDHSSIEENHSNEMLPKTSSPLNKAESHEGIFQKLTHGMDGEESECNEPPLDQTSDHSDETESIG----FSSDDSDSLSSQGTADTFERELEIAVTQGSAPSQHTPSVSIDPNQELAGDEENVSETDFAAQECQDEMDIKTHEQREDDGPDEEANDPIPESTTNC-----VMKESNRTTLAQK-------DHGHCQPLPPPGSTSEVGFHRSVQRKTRRSGRLNPLA--TSDQLPTEGNDIDHPPNRGSDQHVVNENDFTIEDACDKITLQTSLNKLLVVDLRKRLRERNLSTAGKKAELVNRLVAHLLLTPSSSEETKSSDETNAVELGEMDKDLGSAGEEMREATVIKCVSGNQEDEAKTTVVESSDGELDDQTAALEKEHPNGKQIPDDDENANGGKHVIIDAYRRKTVKELRNILKEKNLDIMSKLRKEELIHHMISLNVRLDDEG-SVESIQTPRPERVLRSTRSGRHTPAASRAPKITQ----PLTAKAVSKLTVSELRTRLADLDLCQFGTKKTLAERLMSGLVS-----PDMDLAEDNSVCDPCRAGQDCE 1238          
The following BLAST results are available for this feature:
BLAST of Ggra3405.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFV03.600e-15434.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 989..1023
e-value: 1.1E-7
score: 41.5
coord: 1180..1214
e-value: 0.84
score: 18.2
IPR003034SAP domainPFAMPF02037SAPcoord: 994..1023
e-value: 5.8E-9
score: 35.5
IPR003034SAP domainPROSITEPS50800SAPcoord: 989..1023
score: 11.204617
IPR003034SAP domainPROSITEPS50800SAPcoord: 1180..1214
score: 8.707654
NoneNo IPR availableGENE3D2.60.200.20coord: 7..111
e-value: 1.2E-5
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1130..1175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1137..1174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 821..852
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1030..1047
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1026..1047
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..802
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..984
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 880..903
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 803..820
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 922..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..484
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 973..1037
e-value: 4.4E-10
score: 41.0
coord: 1160..1226
e-value: 5.1E-7
score: 31.2
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 986..1023
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 14..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000905_piloncontigtig00000905_pilon:238635..242378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3405.t1Ggra3405.t1Gracilaria gracilis GNS1m malemRNAtig00000905_pilon 238635..242378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3405.t1 ID=Ggra3405.t1|Name=Ggra3405.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1248bp
MGDESNIAAPFSCSITVIQATGEAGKSFEFDTKNWCVLGSHQDCDIRIKH
SLNAPLHALVLVRQEGIHLIGLHPDIPVHHSRTGASLTKEQEAPLLTGDS
FYLGDRGFRVDYESPTVKCLKSPSQSVSDSIGPQTRSVKKTAAEKKVVHR
TQSSERKRRSRRRVSLVVEADGERFVSQKRDTERLLSKTQIARLSDGEGL
QTPLASVPEKSAPSDQKCSTKEGTQGSRPHSHEKSEDVQSRSEEDGKDVR
GKNSEPDVPQREDGMLIKETDLPEQGKGGVNSALKEARSRKMSLPPTPTT
RSSARMVKSVSKQGTLTARERKKLVYARLSLGLTAHPSKNEMTGGLENNV
TVAFASQTSATKERKLDMNLHKSNNQIANQEIKEKNMIRSPLTDKSPILN
IQRSGKTSGGVSKECRTPSTMKTCPGSLLRSSKSTTRATKRSVAFSSKIE
LERGKHYSPFRPSVPRTTPFPRRSEGQSNEGTPAERGRFSFDSVVGVPHD
TQNSCGKNKLEVGKDQTDAVEVFSDPSSGLEGAADSDSLTDASDCVSDSS
SPATGSSTDSSTSRLTGAITSLLKRFSGNGDQQKTDEIAHAACATGKVHA
SDSKVVKLYEGKASTEPLMSVDEIQDISSSKRMSVSRRLSFLEKVFGAAA
AVRNVMADTDEDSTIQDKLNENGSNMEGAVCRSDGHAISNSPSNDVRNSS
GEECEEPESESKRGTASCAGTCVEGVSQSLAQDEEQAQVDLHSSIESQPG
LVSSDGQSVLCEPKQRLSLGNIFERLTKGTGEHAKSRGEVSANDHHDSPE
DYGSPNRTISCETNSIDSQDTADTFERELEIRVNRASFRPHSPRHGEDVE
DLEAEIQGLIAGNEVDSPLAQTPHGDIESSELDQSVRDSNADVLDGKEVL
VENDEETQLEECCEDDRSDSEGSQPCTSPEVLDTSCSRSAGRRRSSQPAP
ESQKSVPELSEEAEALKEPNVLGGQTEQKDEEQDLEAELNQLLVVELRER
LRELNLSIAGRKAELVERLTQHILQEEAELPEEPEQSTEGEVHEDIEPDE
IEVCEHEVKEQESESTVIVISSDSEGEAGEGEESESNLELYRRKTVKELR
QILKGRNLDIMSKLRKEELIQHMIAEGVKLPEHDQDAQSVESPSSGRVLR
STRKTRQTPSVSRRSCSTAAKGAPPTAKSLNRLTVIELRSCLREQHLCQQ
GTKRVLIDRILSEDQSNNQDTPANELKSNNSCKSCQAGQGCEVENRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf
IPR008984SMAD_FHA_dom_sf