Ggra3260.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3260.t1
Unique NameGgra3260.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length100
Homology
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BLAST of Ggra3260.t1 vs. uniprot
Match: A0A2V3J6I0 (Pre-mRNA-processing protein 45 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I0_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 5.340e-24
Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 0 
Query:    1 MSLKSLLPSPTDVIVFTPADLPSARALTVVPSQPSTRGGFSRVLSLPVSTDSPDYAAVVPQGENASRIVHISYDALIEKTREGALMPMPKTLEIKQTAR 99
            MSL+ LLP PTD  VF PAD   + ALTV+P++     G SR+L+L VS D PDY+AVV QGENA+R V  SYD+L+EK RE  L P+P   +I +TAR
Sbjct:   28 MSLRDLLPPPTDGHVFNPADEEPSVALTVLPTKQPKHAGVSRLLTLRVSADGPDYSAVVRQGENATRTVQTSYDSLVEKPREQVLTPLPTKQQIDETAR 126
The following BLAST results are available for this feature:
BLAST of Ggra3260.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6I05.340e-2455.56Pre-mRNA-processing protein 45 n=1 Tax=Gracilariop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:47603..47902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3260.t1Ggra3260.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 47603..47902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3260.t1 ID=Ggra3260.t1|Name=Ggra3260.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=100bp
MSLKSLLPSPTDVIVFTPADLPSARALTVVPSQPSTRGGFSRVLSLPVST
DSPDYAAVVPQGENASRIVHISYDALIEKTREGALMPMPKTLEIKQTAR*
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