Ggra3218.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3218.t1
Unique NameGgra3218.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1370
Homology
BLAST of Ggra3218.t1 vs. uniprot
Match: A0A2V3IYM5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYM5_9FLOR)

HSP 1 Score: 1072 bits (2773), Expect = 0.000e+0
Identity = 678/1387 (48.88%), Postives = 866/1387 (62.44%), Query Frame = 0
Query:    1 MGNTASRSHIRDAERGVARTTRENTRRNAVPVSVSPHQPPSLSSTSTELQPPDFPLHLAPRSISFPDHSAPRECSPHDAHRLRLQASVPSPIAAPITKRRARHVSADIPFVSPVPQPASPSARSNSAQDSLIAIAPAEPPLLDPSLTATSFGLCHAKRTHTPPRVDKPPRARKVVSFNENVRVVTYPCDNSSGYSSAGEQTPDPKYAEKARRKRGRSVFRLLHRVAG-LEPEPASCFSGQYDACCGLLNNAADSAYQDSPAQPQISQTRRLDYQSPKDQTHHT-DNDRLSYTTKNRRVVKPPPEAYSLPEGDTVVDDYDYTERQDSLNEPSNLSEPHHPIIEDPIPEAAN------RSNSSFDISPLWQRLKHVDELDDIDPSRRTMPPRISDPEEDDEVRPVPQPSLHLQRSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTSRQSSKRSVPSVGVDDMTSATPTIAFEDESKQSLSATGLDGPSEIRKTKSMQSPVKHADKSPPIAFPRSASASKPPLPRSRSSACESEPSFAALQPVNHKSASLP-SASDRPGIEVQIRGSDRVPSMSSQPDQKPVPTMRDEDPLAAKKPPLPNRKTSQLAEEKKTFMQAIAHAEN-ALQMPTDEITHTTILPIPQPQGKIRDTFEKGSQTIHPATKRKSSDEARNEMEIKADTFGALSSPLTPDSKTEKSFSFKSLQSVAKEAIRASGSTQRSSEARETLSSQVSKAFNKRSTSGTQSPQVHEKFAQKSFGHTKSDSMIPASRQGEVNDYTQRTACRHPNVSEYREHGSEQLSNATLPGLSDIQTTHVEEREVPHVDSRDVVNSGHMLPDASLATSSDIEDSAPSTGNI--VPTVVDPNAAEPVALSSKNFRRHSNRISASLRYTYAEDETLNFSALNEEDQLVNEPRSKLSIPKVRSGTSSHANDGNCEDVDIFEAANRAAVDINALVDQSKENDSAVGSLDGLDLEPVVLPGDDDYSVAPMSPMQNFTPVAGIYYGNSSPSEETMSPEETVSDKIGIAEYPEYEVLRVAENENEDSVFGSEPNTPVPKESSGWRDARPKRSRDLSEQVRDSVAVQLASLSSIHGGRGAGDRTTGKMVPEVLLRDWSGNTPIEPTVEVVDSAPNSRSSASHVFRTERFPRNVQISSGTDSYRPGNNSNTQVRDRLQEAKDRLLRVSLHTTDEDHSTQN---PSHVRQDVPGKFSTHGFPRRRIGDVIPENEG-STAVNQARANGRLGHSMAFERGIHHRSNERSRTFEPALPKAFAMDPVLQDFQVPVTRKSLSEAGGRTRGL--DHTTAFLDEESYAGNTRNVRKADFGFQPPNHDSRTIQLPSNRKQTSDVEHGASAARDESQAFRNVVGRLVNRMQSAKRMLSTS 1369
            MGNT +RSHIRDAER VARTTR NTRRN+ P   +  QP SLSSTSTEL   DFP    PRS+SFP+       +PHDAHRLRL+ S PS I++  T+RRARHVSADIP  SP P   + S RS S    L        P LDP+L   +   C+A RT TPPRVDKPPRARKVVSFNENV VVTY C+ SS +SS  + +         R KRGR VFRLL RVA  +EPEPA CFSGQYDACCGLLNNA DSA QD+ A+ QI+++R L YQ+P D      + DRLSYT K+R++ K    ++S P+ D + DD+DYTER ++  +  + S PH  +  +P  +  N      R+NSSFDI+PLWQRLK VDELDDID SRR      +D  ED++V P+PQP++HL+ S E                              + S  S  R  P V   +                          +++ K+ S++S     D+   + F RS S+SKPPLPRS+SSA ESEPS+ AL+ V  KS SLP S+S       Q   S+    ++S   +K  PT   ++   AKKPPLPN KTS+L EEKK+ +Q + +A+N A    T+ I+ +  LP+PQ   K R TFE+GSQT    +KR  S+E  +++ +K D+F +LSSPLTPDSKTEKSFSFKS  SV K     S ++    EA+E + S+VS  F++  T     P+   +   +S             R G+ +    R +     ++      S + S A L   SDIQ++  EER V  +DSR     G     +    +     +APST     VPTVVDPNAAE VALS + FRRHSN+ISASL+YTY +DE L FSALNE DQLV+EPRSKL+IPKV SG  S + DG+ ED++IFEAANRAA DI+ALV  +++  SAVGSLD LDLEP VLPG+DDYSVAPMSP+Q++ PVAGIYYGN S +E  +S +++ +DK GIAEYPEYEVLRV EN+N DSVF SEPNTPVP+ESSGWR+A+PKRSRDLSE +R SV+VQLA+LSSIHGGRG  DRTTGK+VPEVLL DWSGN PIEPTVEVVDSAPNS+SS S VFR  +  R ++ +S  +     +NS   V+  L+EAK+RL++  +  + +++  Q+   P+  R+D  G+FS      R +  V   NE  S  +  + + G    S A ERG + +    S  F+ ALPKAFA DP LQDFQ+P+ RKSLSEAG    G+    ++ F DEES   + R  R+   GF+   HD+R IQLPS R+Q SD+EH  S  R E+ AFR V+GRLV+ +Q AKRMLST+
Sbjct:    1 MGNTVTRSHIRDAERSVARTTRANTRRNSAPPPPT-DQPLSLSSTSTELHVADFPPPPVPRSVSFPN------AAPHDAHRLRLE-SPPSSISS--TRRRARHVSADIPS-SPTPASITRSPRSTSVHTPL--------PPLDPTLPGATLRDCYAARTQTPPRVDKPPRARKVVSFNENVHVVTYSCETSSAHSSNPDVSXXXXXXXXXR-KRGRGVFRLLQRVAAAVEPEPAGCFSGQYDACCGLLNNAPDSACQDASARLQITESRLLAYQAPNDTLEQQPEPDRLSYTAKSRKLAKSSQISHSHPDSDAIDDDFDYTERNNTPQQSIHHSHPHLSVQPEPSAQHCNPETQAQRANSSFDITPLWQRLKRVDELDDIDHSRRAYLHH-ADIHEDEDVTPLPQPTVHLKLSHESRESTVSRSRRNRPAQNASSRNSSS----ATKSENSHSRLPPPVQKAETDQXXXXXXXXXXXXXXXXXXSDSSSTDVSKSNSLRSGSDSVDEPIAMPFKRSVSSSKPPLPRSKSSAAESEPSYTALRAVFAKSPSLPASSSTHVRASTQRAVSEDHSDLTSMSPRKAPPTKLADEAPGAKKPPLPNGKTSKLVEEKKSGLQPVVYADNSATPFATESISGSPSLPVPQMAAKSRSTFERGSQTAGNVSKRIRSEEIGHDISVKPDSFASLSSPLTPDSKTEKSFSFKSFHSVQKAFSNPSVASHHPCEAQEEMHSRVSSGFHQSDTG----PRASTRTPTESDDEHGLTMQNDHGRYGDASSSVPRGSGGPDEIAP-----SARQSRAVL---SDIQSSRTEERAVAGIDSRVGPPLGQRRASSGADATLPSHSAAPSTSGHKGVPTVVDPNAAELVALSPRAFRRHSNKISASLKYTYEDDEPLTFSALNEADQLVDEPRSKLTIPKVSSGIPSRSYDGDSEDMNIFEAANRAAADISALVADAEDGRSAVGSLDELDLEPAVLPGEDDYSVAPMSPVQDYMPVAGIYYGNPSATENQVSSDDSTTDKGGIAEYPEYEVLRVEENDN-DSVFESEPNTPVPEESSGWRNAQPKRSRDLSEHMRGSVSVQLANLSSIHGGRGVEDRTTGKIVPEVLLHDWSGNMPIEPTVEVVDSAPNSQSSESPVFRMGKVQRKLRKNS--ERTERTSNSTADVQLTLEEAKNRLMQDVVQNSMDEYPLQDSEQPNAERED--GRFSRPSSREREVDSVNNNNEDTSIRIRFSSSAGNRRSSAAIERGGNTKERTGSPHFQAALPKAFAADPKLQDFQMPLERKSLSEAGYWRPGVGGQASSFFEDEESDNEHERGARREYIGFKSSKHDTRPIQLPSQRRQVSDMEHALSLTRTENHAFRGVMGRLVSGVQIAKRMLSTN 1345          
BLAST of Ggra3218.t1 vs. uniprot
Match: R7QSB5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSB5_CHOCR)

HSP 1 Score: 143 bits (360), Expect = 1.050e-31
Identity = 131/421 (31.12%), Postives = 201/421 (47.74%), Query Frame = 0
Query:  963 LEPVVLPGDDDYSVAPMSPMQNFTPVAGIYYGNSSPSEE-TMSPEETVSDKIGIAEYPEYEVLRVAENENEDSVFGSEPNTPVPKESSGWRDARPKRSRDLSEQVRDSVAVQLASLSSIHGGRGAGDRTTGKMVPEVLLRDWSGNTPIEPTVEVVDSAPNSRSSASHVFRTERFPRNVQISSGTDSY-RPGNNSNTQVRDRLQEAKDRLLRVSLHTTDEDHSTQNPSHVRQDV------PGKFSTH--GFPRRRIGDVIPENEGSTAVNQARANGRLGHSMAFERGIHHRSNERSRT------FEPALPKAFAMDPVLQDFQVPVTRKSLSEAGGRTRGLDHTTAFLDEESYAGNTRNVRKADFGFQPPNHDSRTIQLPSNRKQTSDVEHGASAARDESQAFRNVVGRLVNRMQSAKRMLS 1367
            L+P+VLP  DD+SVA  +P  + +P+AG++YG  S S E   SP+    D  G+A+YPEYEVL+     NEDS+FGSEPNTPV + +SGW +  P    D   ++ D +  +   L  ++      DR     VPEVLL DWSG+ P+EP V++VDSAPNSRSS ++   +  F  + + +   D Y +  N  ++Q+   L +     L      TD         H R  +      PG+   H  G P   +     E++ S+ ++Q          ++ E   H R    +R          ++    A DP L DFQ  V R+ + + G R  G     +F +       T   R+   GF   +  +        R++ S++E   S+ R+E      V+GRL + M  AK+++S
Sbjct:  206 LDPLVLPSQDDFSVAHCTP--DISPLAGVFYGADSISSELNSSPDTLPRDDAGLADYPEYEVLK--NQTNEDSIFGSEPNTPVLRTTSGWNE--PFGDYD---EMGDRLREERVPLGHVNFE----DRNRDT-VPEVLLHDWSGSIPVEPNVDIVDSAPNSRSSTTY---SRLFSAHTKEA---DEYAKTANLISSQLTANLSK-----LFSESSQTDVGEGAVRDRHGRNSLLDLMPRPGEVIRHESGIPPSPVRTA--EHDNSSVLSQVAW-------VSSEYEDHSRGARAARAELGRGGIFTSIAGTHAPDPRLDDFQTTVQRR-VGDGGRRAAGAKRGRSFAE-------TERAREDADGFAEESGGAT-----GRRRRLSNLE---SSGREEGGLRAVVMGRLASGMHLAKKLVS 576          
The following BLAST results are available for this feature:
BLAST of Ggra3218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYM50.000e+048.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSB51.050e-3131.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1027..1067
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1050..1065
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1312..1341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..742
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1316..1334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:101075..105184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3218.t1Ggra3218.t1Gracilaria gracilis GNS1m malemRNAtig00000922_pilon 101075..105184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3218.t1 ID=Ggra3218.t1|Name=Ggra3218.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1370bp
MGNTASRSHIRDAERGVARTTRENTRRNAVPVSVSPHQPPSLSSTSTELQ
PPDFPLHLAPRSISFPDHSAPRECSPHDAHRLRLQASVPSPIAAPITKRR
ARHVSADIPFVSPVPQPASPSARSNSAQDSLIAIAPAEPPLLDPSLTATS
FGLCHAKRTHTPPRVDKPPRARKVVSFNENVRVVTYPCDNSSGYSSAGEQ
TPDPKYAEKARRKRGRSVFRLLHRVAGLEPEPASCFSGQYDACCGLLNNA
ADSAYQDSPAQPQISQTRRLDYQSPKDQTHHTDNDRLSYTTKNRRVVKPP
PEAYSLPEGDTVVDDYDYTERQDSLNEPSNLSEPHHPIIEDPIPEAANRS
NSSFDISPLWQRLKHVDELDDIDPSRRTMPPRISDPEEDDEVRPVPQPSL
HLQRSREPKPSSISHSRRNRPLPKPSHSIPSSAQAKTSTSRQSSKRSVPS
VGVDDMTSATPTIAFEDESKQSLSATGLDGPSEIRKTKSMQSPVKHADKS
PPIAFPRSASASKPPLPRSRSSACESEPSFAALQPVNHKSASLPSASDRP
GIEVQIRGSDRVPSMSSQPDQKPVPTMRDEDPLAAKKPPLPNRKTSQLAE
EKKTFMQAIAHAENALQMPTDEITHTTILPIPQPQGKIRDTFEKGSQTIH
PATKRKSSDEARNEMEIKADTFGALSSPLTPDSKTEKSFSFKSLQSVAKE
AIRASGSTQRSSEARETLSSQVSKAFNKRSTSGTQSPQVHEKFAQKSFGH
TKSDSMIPASRQGEVNDYTQRTACRHPNVSEYREHGSEQLSNATLPGLSD
IQTTHVEEREVPHVDSRDVVNSGHMLPDASLATSSDIEDSAPSTGNIVPT
VVDPNAAEPVALSSKNFRRHSNRISASLRYTYAEDETLNFSALNEEDQLV
NEPRSKLSIPKVRSGTSSHANDGNCEDVDIFEAANRAAVDINALVDQSKE
NDSAVGSLDGLDLEPVVLPGDDDYSVAPMSPMQNFTPVAGIYYGNSSPSE
ETMSPEETVSDKIGIAEYPEYEVLRVAENENEDSVFGSEPNTPVPKESSG
WRDARPKRSRDLSEQVRDSVAVQLASLSSIHGGRGAGDRTTGKMVPEVLL
RDWSGNTPIEPTVEVVDSAPNSRSSASHVFRTERFPRNVQISSGTDSYRP
GNNSNTQVRDRLQEAKDRLLRVSLHTTDEDHSTQNPSHVRQDVPGKFSTH
GFPRRRIGDVIPENEGSTAVNQARANGRLGHSMAFERGIHHRSNERSRTF
EPALPKAFAMDPVLQDFQVPVTRKSLSEAGGRTRGLDHTTAFLDEESYAG
NTRNVRKADFGFQPPNHDSRTIQLPSNRKQTSDVEHGASAARDESQAFRN
VVGRLVNRMQSAKRMLSTS*
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