Ggra3104.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3104.t1
Unique NameGgra3104.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length900
Homology
BLAST of Ggra3104.t1 vs. uniprot
Match: R7QVK8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVK8_CHOCR)

HSP 1 Score: 566 bits (1459), Expect = 4.910e-187
Identity = 321/758 (42.35%), Postives = 472/758 (62.27%), Query Frame = 0
Query:  146 ESQSDEDPAHPKSVYGASILLKLQWEDKKAQKKVPHRTYEELGQFIGDSFNDLNDALQQNEAAGDAVVNVMAFDLTPLILARYMDGVETCTDVLTDNAFNLLTLFVERGVPKEMHLAIKTFLKQIDIVYLEASSYLLLKPLMNLWMKLVLRMPRMRHKFVRELLKEFDRMLSFAEAYEVSFVPDEGGIGIERSGRIKGMNDIILQFLEDLTKLQTKQSQESETIYVQVDELGRAKKPVSQEADTEASNKASADKAGNGNVEEGRKNAEASDEKKTETGGGEEGKQSKGCQNGDTSANGIAKETTDWVNERAVTLARALQILGLLWADISPPPGEERDLPLKKRSSKKSEAAQSRRNLRRERKELLLARCIGLFRGLGWSNPVLVCQIANNGLNIQGCSMSDDSFKEHLGEDIRSRSERKNTLYSVNGIAHYLCGVLR-----PKTGSLLRGIESSDIDHYKYDLTDTGFDLLDETYAFDLVLPYAMALVSLSDPTLLVAGLLLLRAFLNRLPEKSFDTYEEALRLRFGVNILGREANILGLALHLAKAIAACDDPKHRQVAYDTLRDLMSKCSHPALRYTISECVFQESKRMAVTAQLVTDMKDVIRFSDGVAAKGTRKDWG-MAQASALRTQFVEVCLPKYFTPQRSLLSCVSPMVSTSNACLFLAASDSRLLKAHEDDKKLCEGIKRRGRFMKAYCKLGMECVRALASAAEHDQKNVPRSKLARENRNEAMALFAASEQTLNQSIAAICALSGALE 897
            +++ + D  HPKSVYGASILLKLQWED+  QKKVP RTY+ LG F+ D   +L  ALQ N +A   V++ +AF+LTPL++ RY+DG+ETCT  L   A +LL L       KEMH+AIK F  +ID  YLEA+SYL L+P+++LW  ++ R+P+ R  FV + +K FDRML  AEA+E SF+P++G IG+E+SGRI G+ D +L FL+ L   Q +Q ++  +I V+VD LG A      E      NK SAD       EE  KN E  D        G EGK S   +   ++A      TTDW+ ERA+ LA+ L +  ++W+ +  PPGE+R++P KK  S+K  +   +  +  E+KE  L +C  LF  LGW+NP +VCQ+A NGL++   S  ++  K H+G    SR ++ NTLYS   +  Y+CG LR     P    +  G      D  K DL+ T F+LL+  +  DLV+PY   +V  +   + +AG++ LRAFL+R+P+    T++E LRLR G    GRE N+ G+A H+ KA+A  DDPKHR++ Y+TL+ ++ KC+ P  RY + E +F E+ R A+ AQL+T+MKD +R++D ++ + T+ D   + QAS LR++  E  + +YF P++ LL  ++P+ + SN   FL  SD +LL+  +D K+L   I++R RF + Y +LG + +RA+AS AEHD++ +P S LA++N  +A A+F AS +TLNQ + +I  L  AL+
Sbjct:   49 DAEGESDDEHPKSVYGASILLKLQWEDRTVQKKVPLRTYKTLGMFLSDVTCNLRTALQGNASAAQFVIDAIAFELTPLLVTRYLDGMETCTGALEHGALDLLRLLATHANAKEMHIAIKKFTSKIDSTYLEATSYLALRPVLSLWGDVIPRIPQKRRLFVNDYVKVFDRMLPCAEAFETSFIPNDG-IGVEQSGRIAGIPDTLLDFLDKLADAQIRQMKDG-SISVEVDVLGTAHAKSFPEK-----NKESADSE----TEEVNKNKEKGD--------GTEGKTS---EKKSSAAPDPMATTTDWILERAIALAKVLDVQSMIWSRLPAPPGEDRNVPKKKSKSRKKNSTAKQGKMVEEQKEESLDKCAALFLKLGWNNPAVVCQLARNGLSLDPASRHEELMKLHIGTKSLSRKQKMNTLYSATAVGQYICGALRMWTKRPHEAGMEGGAPRDPYD--KIDLSGTAFELLEPFHCLDLVMPYLAPVVMQAGVAVSLAGIVTLRAFLDRIPDGRIKTFDEILRLRNGTASFGREINLFGMAHHVGKALAGYDDPKHRRIGYETLQAMLRKCASPVARYVLCEAIFYETTRNAIAAQLMTEMKDAVRYAD-ISWRDTQGDSDRIVQASHLRSRLSEDTIGRYFIPRKELLGFMNPLCTVSNLVYFLVRSDPQLLEKTQD-KELRNEIEKRLRFCQEYGRLGKQLLRAIASVAEHDRRKIPESALAKKNTVDAAAIFQASGRTLNQCVGSISLLDAALQ 780          
The following BLAST results are available for this feature:
BLAST of Ggra3104.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QVK84.910e-18742.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 492..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..500
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 645..899
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..620
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 621..644

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:145269..147968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3104.t1Ggra3104.t1Gracilaria gracilis GNS1m malemRNAtig00000120_pilon 145269..147968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3104.t1 ID=Ggra3104.t1|Name=Ggra3104.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=900bp
MDAYDLKQQEDGSYEMQRQDHRLHVGTGEEAEQQWPDIQQEEEAMPVLDL
SESWIKLIAEEELTSDIKKEDDIISYNAKVISAELKYHILASTKNTKPAT
EVDSAVVEESRDTNQQERKEEESKPVDNGEGNTEPEKKKEEEQRNESQSD
EDPAHPKSVYGASILLKLQWEDKKAQKKVPHRTYEELGQFIGDSFNDLND
ALQQNEAAGDAVVNVMAFDLTPLILARYMDGVETCTDVLTDNAFNLLTLF
VERGVPKEMHLAIKTFLKQIDIVYLEASSYLLLKPLMNLWMKLVLRMPRM
RHKFVRELLKEFDRMLSFAEAYEVSFVPDEGGIGIERSGRIKGMNDIILQ
FLEDLTKLQTKQSQESETIYVQVDELGRAKKPVSQEADTEASNKASADKA
GNGNVEEGRKNAEASDEKKTETGGGEEGKQSKGCQNGDTSANGIAKETTD
WVNERAVTLARALQILGLLWADISPPPGEERDLPLKKRSSKKSEAAQSRR
NLRRERKELLLARCIGLFRGLGWSNPVLVCQIANNGLNIQGCSMSDDSFK
EHLGEDIRSRSERKNTLYSVNGIAHYLCGVLRPKTGSLLRGIESSDIDHY
KYDLTDTGFDLLDETYAFDLVLPYAMALVSLSDPTLLVAGLLLLRAFLNR
LPEKSFDTYEEALRLRFGVNILGREANILGLALHLAKAIAACDDPKHRQV
AYDTLRDLMSKCSHPALRYTISECVFQESKRMAVTAQLVTDMKDVIRFSD
GVAAKGTRKDWGMAQASALRTQFVEVCLPKYFTPQRSLLSCVSPMVSTSN
ACLFLAASDSRLLKAHEDDKKLCEGIKRRGRFMKAYCKLGMECVRALASA
AEHDQKNVPRSKLARENRNEAMALFAASEQTLNQSIAAICALSGALELL*
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