Ggra3039.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3039.t1
Unique NameGgra3039.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length901
Homology
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A2V3IYY6 (DNA polymerase kappa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY6_9FLOR)

HSP 1 Score: 1024 bits (2648), Expect = 0.000e+0
Identity = 549/888 (61.82%), Postives = 656/888 (73.87%), Query Frame = 0
Query:    7 LTVAPTAAQSHPKQSSPFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCHGGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTAVRGIKRIDTFFTAASRDVPRGSHKDFVPTNESRKKAATTLGLYPPNIGNENVEGNRRSPLNGS-DSDEILPAPEQNTEQEMSRRHVEGSKAPMKNHDVFRMEIDEDENDEDEIEAHQTNHVSHVQQVDKT-----LAQKIPPGWDRTVFKALPLSLQTELLRNTSNQSLSGRAQERPGQGDAPMD--PARRDSKKRASTHKRNKHLSKLSKRPRKKHQAQITMTQFANIRELRDKGNDVLDAEEFRSKPLRECIELLQDLNHGRRHSTLGGLRRKNSGNQTSK--SVTFLDGDKSDAIGDNDAFDIPSPPSMSSDSDMENVDKIVKILEKEGIEHKQIYANEDIEAFAEELYAWMSDTAGDVKSAHVELLRGRLMENVRLKQLEHVSENVRLLRKFAESESLTGWRRSVNTLVEEVREETRRRHGLDLTLPPLF 884
            L+ +  A    P Q + FW+DPRPSNRNPNFVRDYFQSSRLHFIGSFRARYE+MMV+VAK L VNPGSLIS+AP  +  ER+I+HIDMDCFFASVAVK DPSLR KCIAVCHGGGEISSCSYEAR +GVRAGMFAKDARKLCP LLSVPYHFP YE+ISIQIY+LF+DYPGV+VEAVSVDEAYLD T+     TSQ  A+ L ++IRSRIV  TGCTASAGIGPSKLIARLATKAAKPNGQLRVRPE VIEYIDTLKVSDLPGVGW TSKKMT++GI+++P LR KSL+FLQ NFG+RQGQT HDLARAID RPVEPLKPRKSIGAEASWGIRFE+NED+KL+ FI+DMASEVASRV + GASGSK+ VKLYR+KP SSM+GYKFLGHGPCT++SR++N+PR C   TL  AL  SC+RV  ET+IRNDEFRG+GLQV+DLKFG+L+FDHS   V+G+KRID+FF  ++R  P         T+   +K +      PPN      + +  S   GS D DE+L   E                                + +ED +E    N + +    DK      L  KIP GWD  VFKALP SLQ ELL+N  NQ+ + RA  R    D      P R  SKKRAS+  R +++++   RPR++ +AQITMTQFA+IRELRDKGNDVLDAEEFR +PL+EC+ELLQDLNHGRR+S     R++ SG  T K  SV+F + + +      +  +IPSPP MSSD D +  ++++ ++EK G+EH QIYA ED+  F+++LY+WM  TA DVKS HVEL+RGRLME +RLKQL+ V ENVRLL +FAE + L GWR  VN L+ E+ EETRR+HGLDL LPPLF
Sbjct:    8 LSASNRAHLPQPTQPNSFWNDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYEAMMVAVAKRLKVNPGSLISAAPTSSCAERLIVHIDMDCFFASVAVKRDPSLRAKCIAVCHGGGEISSCSYEARKFGVRAGMFAKDARKLCPNLLSVPYHFPTYEQISIQIYALFHDYPGVFVEAVSVDEAYLDITDTAKDATSQAGADDLVQSIRSRIVRETGCTASAGIGPSKLIARLATKAAKPNGQLRVRPENVIEYIDTLKVSDLPGVGWSTSKKMTQIGIETIPQLRRKSLSFLQTNFGERQGQTLHDLARAIDSRPVEPLKPRKSIGAEASWGIRFEENEDDKLSNFISDMASEVASRVESVGASGSKVCVKLYRRKPNSSMLGYKFLGHGPCTILSRMYNIPRPCDWATLRKALCDSCLRVIKETRIRNDEFRGLGLQVVDLKFGELRFDHSGAPVKGVKRIDSFFNVSNRRAPASQ-----ATHGQLRKTS------PPN------DVDTASKAKGSSDRDEVLLEKEDEITPXXXXXXXXXXXXXXXXXXXXXXXXXXAQPEEDGVEIVADNRIPN-NGADKLPDNHGLTSKIPFGWDTAVFKALPESLQAELLQNNRNQTTTSRANTRRATRDETKSAAPTRGASKKRASSRTRQRNVAR---RPRRRQRAQITMTQFADIRELRDKGNDVLDAEEFRCRPLKECVELLQDLNHGRRNSAFVN-RQRRSGVPTEKRKSVSFAEANSNRLAAVEETLEIPSPPCMSSDYDSDENNRMLHVVEKAGVEHTQIYATEDVTDFSDKLYSWMRRTAVDVKSGHVELVRGRLMECIRLKQLDEVCENVRLLHRFAEGDGLEGWRVGVNALLREIGEETRRQHGLDLKLPPLF 873          
BLAST of Ggra3039.t1 vs. uniprot
Match: R7QH65 (UmuC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH65_CHOCR)

HSP 1 Score: 718 bits (1853), Expect = 7.580e-245
Identity = 428/909 (47.08%), Postives = 556/909 (61.17%), Query Frame = 0
Query:    1 MQRDDALTVAPTAAQSHPKQSSPFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAP-------KPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCHGGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAAD--TSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTAVRG-IKRIDTFF-TAASRDVPRGSHKDFVPTNESRKKAATTLGLYPPNIGNENVEGNRRSPLNGSDSDEILPAPEQNTEQEMSRRH---VEGSKAPMKNHDVFRMEIDE-------DENDEDEIE-AHQTNHVSHVQQVDKTLAQK-------IPPGWDRTVFKALPLSLQTELLRNTSNQSLSGRAQERPGQGDAPMDPARRDSKKRASTHKRNKHLSKLSKRPRKKHQAQITMTQFANIRELRDKGNDVLDAEEFRSKPLRECIELLQDLNHGRRHSTLGGLRRKNSGNQTSKSVTFLDGDKSDAIGDNDAFDIPSPPSMSSDSDMENVDKIVKILEKEGIEHKQIYANEDIEAFAEELYAWMSDTAGDVKSAHVELLRGRLMENVRLKQLEHVSENVRLLRKFAESESLTGWRRSVNTLVEEVREETRRRHGLDLTL 880
            MQ +D   VA       PK    FW DPRP+N NPNFVRDYF SSRLHFIGSFRARYESMMV+VA NL VNP  L+ S+        K    ERVI+HIDMDCFFAS+AVK +P+L GK IAVCHGGGEISSCSYEAR +GVRAG F +D RKLCP LLSVPY FP+YEE S+ IY++FY  P V VEAVSVDEAYLD T A+  D   SQ  A++L  ++R +I   TGCTASAGIGPSKL+ARLATKAAKPNGQ+RVR E VI Y+DTL+V DLPG+GWRT +++ E  I ++P LR  SL  LQ  FG RQGQ F++LARA+D RPVEPLKPRKSIGAEASWG+RF + E++K  KFI DMA EVA+RV  AGA G+K+  K Y++K  +SMVGYK LGHGPC V +R   +      + L + LR +C+R+ ++  + +DE RG+G+Q+ DL F DL FDH+     G  +RID+FF TA    +  G       +   R+KAA       P+  N   + + +S     D +E         E E  ++H   +E SK  M +       IDE       D  DED IE A          QV   + +        IP GWDR VF  LP  LQ ELL+++S+   +G    R  +       A R +  +   + + K  +  ++R +++   Q+TMTQFA+I  L+ +G++VLDAEEFR  PLR+C+ELL DL    R   L     +          T     + D + D    +IPSPPS+SSDSD      + +++ ++G E   +YA E++  +AE L  WM   AGDVKS HVEL+RGR++E +R K+LE V   +RL+R F   E +  W    N ++++V+EE R  +   L L
Sbjct:    1 MQEEDTKAVA-----DPPKPD--FWRDPRPTNENPNFVRDYFASSRLHFIGSFRARYESMMVAVAANLAVNPRLLLQSSAEKGLLSAKTTRAERVIVHIDMDCFFASIAVKKNPALAGKPIAVCHGGGEISSCSYEARKFGVRAGTFFRDGRKLCPDLLSVPYEFPMYEEASLLIYAIFYSSPTVSVEAVSVDEAYLDITLAIGDDRHASQSGADALVRSLRDKIFASTGCTASAGIGPSKLVARLATKAAKPNGQMRVRQENVIAYLDTLQVKDLPGIGWRTGRRLREKSITTVPQLRALSLAELQSEFGGRQGQVFYNLARALDARPVEPLKPRKSIGAEASWGVRFTKEEEDKARKFIMDMADEVAARVEAAGAYGTKVVFKEYKRKKNASMVGYKHLGHGPCVVFTRSARIQTRSAGRPLKELLRQACIRLHNDLGLHSDELRGVGVQMTDLSFADLNFDHAEATTAGSTRRIDSFFETAVPSSIGNGL------SISQRRKAANEAIKDLPSSRNGLGQVSNQSKGGAFDKEEPF-------EVEFVKKHSERIEASKERMAS------PIDEQTETHLADIEDEDRIEPAPAQVEFQRAPQVKDAVGKAHESRELDIPKGWDREVFHNLPKDLQDELLKSSSHAIAAGHPPPREAEAVTDDTSAHRIAPPKRRRNPKPKPAAAQAERAKRRKAGQVTMTQFADISNLKKRGHNVLDAEEFREMPLRDCVELLGDL----RGKPLNVRTLQTDRRNVETERTGRREGEEDELED---LEIPSPPSLSSDSD--GSCSMTEMVLRQGFEEGPVYAEEELSTYAEVLRVWMRTVAGDVKSGHVELIRGRVLELLRRKKLERVCSEMRLVRLFVGEEGMGAWVGHYNRILDDVQEECRVLYKFRLAL 874          
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A7S3A8F8 (DNA polymerase kappa (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8F8_9RHOD)

HSP 1 Score: 377 bits (968), Expect = 1.730e-114
Identity = 210/451 (46.56%), Postives = 288/451 (63.86%), Query Frame = 0
Query:   31 SNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISS--APKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCHG-GGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEA-----VAADTSQLN----AESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTAVRGIKRIDT 469
            +  NPNFVRDYF +SRLHFIGSFRARYES++ +VA +   +   L+ +    K N   R IIHIDMDCFF SVAV  DPSL G  + VCH  GGEISS SYEAR  GVRAGMF ++A KLCP+L  V Y F  YE ++ QIY +FY+   V VEAVSVDEA+LD T+A     + A   +L+    AE +A  IR RI   TGC +SAGIG +KL+ARLATK AKPNGQ  +  E+ ++Y+  L V DLPGVGW T  K+ ELG++   DL+ +SL+ LQ   G++ G++ +   R  D + V+P+K RKS+GAEASWG+RF ++E  K++ F+ D+A+ V+ ++  A A G ++ +K+Y K  K++ + +K LGHGPC + +R     R    +T+ +      + + +  KI   E RG+G+QV DL F D+         R +K+  T
Sbjct:  212 TRENPNFVRDYFSASRLHFIGSFRARYESLIAAVAMHRGCSASDLLRTKGTTKENGVMRSIIHIDMDCFFVSVAVAKDPSLAGIPLVVCHQHGGEISSASYEAREKGVRAGMFFREAVKLCPELKIVTYRFEDYERVTFQIYCIFYELSPV-VEAVSVDEAFLDVTDADLPQDILAAMPELSNMPPAERIALTIRRRIAEETGCPSSAGIGANKLLARLATKRAKPNGQFYLSDEEAVQYVADLPVRDLPGVGWSTGGKLQELGVERCDDLQRRSLSQLQALVGEKNGESLYRACRGQDDKQVQPMKVRKSLGAEASWGVRFYEDEGLKMHDFVRDLAAVVSEKLQEARAVGQRITIKVYWKM-KNASLPHKTLGHGPCDIYNRSVKTERTSDAKTIAE----KSIELLNAVKIPPQELRGLGIQVHDLVFLDIVDSSGSNIARFLKQSST 656          
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A087ST14 (DNA repair protein REV1 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087ST14_AUXPR)

HSP 1 Score: 303 bits (776), Expect = 1.550e-90
Identity = 178/420 (42.38%), Postives = 245/420 (58.33%), Query Frame = 0
Query:   28 PRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGL 442
            P+ S  +PNFV  +F +SRLHFIG ++ R ES+M+S         G +    P P    +VI H+D+DCFFASVA    P   GK +AVCH     G  EISS +YEAR YG+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  QL     A  +R+ I   TGCTAS GIG + LIARLATK AKP+GQ  ++  +    + +L++SDLPGVGW TSKK+  LG++S+ DL+  S   LQ   GD+ G    D +R ID R V P   RKS+GAE +WG+RF+  +D    +F+  +A EV +R+  AG  G  + +KL +K+ +      KF+GHG C  +SR H   R   +   I   R +C  + +   + + + RGIGL
Sbjct:   33 PKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQL-----ASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQD--ATRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAAC-DMLTSLHVPHADIRGIGL 429          
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A1D1ZNW1 (Uncharacterized protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZNW1_AUXPR)

HSP 1 Score: 306 bits (783), Expect = 9.890e-89
Identity = 181/433 (41.80%), Postives = 251/433 (57.97%), Query Frame = 0
Query:   28 PRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFD 455
            P+ S  +PNFV  +F +SRLHFIG ++ R ES+M+S         G +    P P    +VI H+D+DCFFASVA    P   GK +AVCH     G  EISS +YEAR YG+RAGMF   A++LCP L+ VPY+F  Y+E+S Q Y +        V+ +S DEA+LD T     D  QL     A  +R+ I   TGCTAS GIG + LIARLATK AKP+GQ  ++  +    + +L++SDLPGVGW TSKK+  LG++S+ DL+  S   LQ   GD+ G    D +R ID R V P   RKS+GAE +WG+RF+  +D    +F+  +A EV +R+  AG  G  + +KL +K+ +      KF+GHG C  +SR H   R   +   I   R +C  + +   + + + RGIGL V +L   + + D
Sbjct:  233 PKSSRDDPNFVESFFSASRLHFIGMWKTRLESLMLS---------GVIGGPTPNPGPGAQVIFHVDLDCFFASVAESEHPLFSGKPLAVCHSNNAKGTAEISSANYEARKYGIRAGMFMAGAKQLCPDLIVVPYNFERYQEVSEQAYKIMMACSAC-VQPLSCDEAFLDVTGL--GDPFQL-----ASRLRADIQAATGCTASVGIGHNLLIARLATKRAKPDGQCHIQEAEAASAMLSLELSDLPGVGWATSKKLASLGLQSVADLQAWSKARLQAELGDKTGAALWDASRGIDTRRVAPPAVRKSLGAEVNWGVRFDSPQD--ATRFLGKLAEEVWTRMGAAGVQGRSLTLKL-KKRKEGVYNPVKFMGHGICDNLSRTHTFHRPAHSAATIH--RAAC-DMLTSLHVPHADIRGIGLGVRELCHWEERID 642          
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A7S1XH28 (DNA repair protein REV1 (Fragment) n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH28_9RHOD)

HSP 1 Score: 310 bits (794), Expect = 1.670e-88
Identity = 184/465 (39.57%), Postives = 264/465 (56.77%), Query Frame = 0
Query:   31 SNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPK------PNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCHGGG----------EISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAAD-------------TSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRI-HNVPRNCGTQTL-IDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTAVRGI 464
            S  NPNFVR+YFQ SRL FIG+F+AR+ES++  +A+N   +  +++S+A +       +  +R I+H+DMDC FASVAV  +PSL GK IAVCHG            EISS +Y AR  G++AGM    A + CP L++V Y F  YE +   ++ +F++   + VEAVSVDEA+LD T  V +D             T   + E LA  +R +I++ T C AS GIG +KL+A++AT+ AKPNGQ  V+P +    +  L VS+LPG+GW T +K+T L + +   LR   LT L+  FG   G    D+ R  D   VE L+ R+S+G E +WG+RF  NE++K+   I +M   V  R+    AS  K+     R K KS    YKFLGHG C V+SR    + +  G  +   D L  +C+ +    KI  ++ RG+G+ +  L+F  LK   S     G+
Sbjct:  189 SRENPNFVREYFQQSRLSFIGTFKARFESILARIAENKGTSVSAMMSTAEQRRRFCEEHKLQRWILHVDMDCMFASVAVAKNPSLSGKPIAVCHGTSSAPNAARSRSEISSANYIAREAGIKAGMLLGTAIERCPSLVTVQYDFSAYEALGKAMFHIFFEITPL-VEAVSVDEAFLDVTGIVPSDDMVKVAHNEQWDVTQLSHQEILAFYVRHKILLQTKCPASTGIGQNKLMAKVATRRAKPNGQFMVQPGEFSRIVSELSVSELPGIGWSTREKLTALNVLTCDQLRAVQLTKLREEFGAVLGTRIFDVCRGRDDSAVELLRIRQSVGVEINWGVRFLANEEDKVENMIREMVEVVLERLGEGSAS--KITFTELRSKTKSEP--YKFLGHGICDVISRSGRTLVKGAGQVSCDFDVLAQACIELHRSIKIAPEDLRGVGIHLSGLRFPWLKLTVSEATTHGL 648          
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A6U9RMQ7 (DNA repair protein REV1 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMQ7_9CHLO)

HSP 1 Score: 306 bits (783), Expect = 1.690e-86
Identity = 177/456 (38.82%), Postives = 268/456 (58.77%), Query Frame = 0
Query:    4 DDALTVAPTAAQSHPKQSSPFWSDPRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYD-YPGVYVEAVSVDEAYLDATEAVAADTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLID---ALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFG 450
            D++L  A   A+      +     PR ++ +PNF+  YF++SRLHFIG+++ R E++M+ V++   V P        +     R I+H+DMDCFFASVA+  +P  RGK + VCH     G  E+SS +YEAR +GVRA MF  +A++LCPQL+ +PY F +Y+++S  +Y + ++ +PG  V+ VS DEAY+DAT          +  S A  +RS I   TGCTASAGI  + L++++AT  AKPNGQL V  E+ + ++ ++KV++LPGVGW T +K+T + I    DL     + LQ+ FG + G+   +  R ID R VE    RKSIGAE +WG+RF  N + +  KF+ D+  E+  R+ +A   G  + +KL RK+ + +   YKFLGHG C       N+ ++    + ID    L  SC+ ++   +   +E RG+G+ V  L  G
Sbjct:  174 DESLNEALRVAEEARSSCAVLGGRPRSASHDPNFMDTYFKASRLHFIGTWKERIENLMIKVSQEQVVPP------IRQDGHFTRAIMHVDMDCFFASVAMLKNPHARGKPLVVCHSNSNQGRAEVSSANYEARKFGVRANMFIGEAKRLCPQLIVMPYQFDLYQDVSEAVYLIMFEMFPG-RVQPVSCDEAYIDATNLD-------DPISWASKVRSEIFSRTGCTASAGISCNMLLSKIATGRAKPNGQLFVSFEEGVAFLKSMKVAELPGVGWSTRQKLTAMNIDICADLVEVPKSVLQQEFGQKTGELLFNHCRGIDGRKVETQPVRKSIGAEVNWGVRF--NHEAEAIKFMEDLCGEIQKRLRHAKLKGRCVTLKLKRKQ-QGANEPYKFLGHGKCD------NLSKSLTLASCIDDAKELMNSCLSLWQSMRFPANELRGVGISVTRLDNG 606          
BLAST of Ggra3039.t1 vs. uniprot
Match: A0A2P6TQ91 (DNA polymerase kappa n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ91_CHLSO)

HSP 1 Score: 309 bits (791), Expect = 3.810e-86
Identity = 176/422 (41.71%), Postives = 250/422 (59.24%), Query Frame = 0
Query:   28 PRPSNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQV 444
            P+ +  +PNFV+ +++SSRLHFIG+++AR E++M S A      P      AP    R RV++HIDMDCFFASVA    P  +GK +AVCH     G GE+S+C+YEAR++GVR+GM    A+ LCP L+ VPY F  YEE S ++Y +   +    V+A+S DEAYLD T          + E LA  IR+ I   TGCTASAGIGP+ L+AR+AT  AKPNGQL V      +Y+  L V DLPGVGW T +K+   GI ++ D+  +S   LQ   G + G    D A   D R VEP K RKS+GAE +WG+RF+ ++D +  + +  +A++V  R+      G ++ +KL R+K + +    KF+GHG C  +SR   + R   T +  D  R  C  +   +++   + RG+G+ V
Sbjct:  310 PKSTRDDPNFVQSFYKSSRLHFIGTWKARIETLMESDAARRGPQP------APHLPGRPRVVMHIDMDCFFASVAEAAHPVFKGKPLAVCHSASAHGTGEVSTCNYEARAFGVRSGMMISRAKDLCPDLIVVPYMFDKYEETSEKVYGILLRHSAC-VQALSCDEAYLDVT-------GLGDPEQLAATIRAEIAAATGCTASAGIGPNPLLARIATDHAKPNGQLAVTQAAAAQYLQALPVKDLPGVGWSTEQKLESRGITTVADVLARSKELLQSELGPKLGAQLWDYAHGRDDRRVEPPKKRKSVGAEVNWGVRFQSDDDAR--RLLDSIAADVQQRLQQGSLKGRRLTLKLKRRK-QGAAEPLKFMGHGECDNLSRSVTLARF--TDSAEDIGR-ECWELLRASRVPFADIRGMGITV 711          
BLAST of Ggra3039.t1 vs. uniprot
Match: M2XRA8 (DNA repair protein REV1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRA8_GALSU)

HSP 1 Score: 304 bits (779), Expect = 4.050e-86
Identity = 237/725 (32.69%), Postives = 349/725 (48.14%), Query Frame = 0
Query:   31 SNRNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSR--ERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCHG---------GGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAA----DTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQN-----EDEKLN---KFI-------------TDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTAVRGIKRIDTFFTAASRDVPRGSHKDFVPTNESRKKAATTLGLYPPNIGNENVEGNRRSPLNGSDSDEILPAPEQNTEQEMSRRHVEGSKAPMKNHDVFRMEIDEDENDEDEIEAHQTNHVSHVQQVDKTLAQKIPPGWDRTVFKALPLSLQTELLRNTSNQSLSGRAQERPGQGDAPMDPARRDSKK-RASTHKRNKHLSKLSKRPRKKHQAQITMTQFANIRELRDKG-NDVLDAEEFRSKPLRECIELLQDLNHGRR 717
            +N NPNFVRD+F  SRLHFIGSFRARYE ++  +     V     +   P   S+  ERVI H+DMDCFFA+V++   PSLR + IAVCH            EISS +YEAR++G+ AGMF  +ARKL P L++VPY F  YE+ S  IY  F +Y    VEAVSVDEAYL+ T  V      D    N E LA  +R  I  ++GCTAS GIG +K +ARLATK AKPNGQ  +   + +E +  L V +LPGVGW T +++  + I     LR  SL  L++ FG +   +  +  R  D RP+E  +P KSIGAE +WG+RFE N     E +K++   +F+             T     V  R+  A A  +K+  K+ RK+ +++    K+LG G     S+  + P +     +       C+ +     I  DE RG+G+    L+F                                SH      +  R  +  TL  Y                             ++N +Q      ++ S+ P K + + +    E  ND   I     N  S+   +D+ + +    GW R VF  LP  +Q ELL++  +        +R   G++    +   SK+ R+  +K N                Q T+TQ  +I + +D+G + ++ AEEF+++ +REC+E+LQD+ H ++
Sbjct:  187 TNENPNFVRDFFAQSRLHFIGSFRARYEKILARM-----VAEEGTLCKLPYDRSKTSERVIFHVDMDCFFAAVSLAKTPSLRNQPIAVCHARQNSEIVDSSCEISSANYEARAFGIHAGMFVGEARKLAPSLITVPYDFEAYEKTSELIYRKFLEYAE-RVEAVSVDEAYLEMTGIVLPVRMKDKEIRNIEDLAMELRLEIERISGCTASIGIGSNKTLARLATKKAKPNGQFAIWSHQAMEKLSLLPVEELPGVGWMTRRRLHSMNIFICQQLRELSLERLEKEFGKQTALSIFETCRGKDERPLELYRPPKSIGAEVNWGVRFENNLQRSREMQKIHIGYRFVIMLCCFYDGISVNTMPVDVVCERLKAADAKATKLTYKVLRKQ-RNAPPPRKYLGCGLVDEFSKSTSFPISDSALEI----GPRCLTLHESLNIPLDELRGVGIHCFGLEFS-------------------------------SH------HHKRHNSGITLSKYFQ--------------------------LDRNPQQLRIDGCLKMSRMPSKQNIMGKTMYHEKSND---IRVSPNNKRSN-HSLDELITKN---GWSREVFVELPNEIQQELLKDAQS------CNQRVFWGNSSAMSSFGVSKRARSKCNKTNPSF------------LQPTLTQLDDIYQAKDQGLSQLVVAEEFQTRSIRECLEILQDVEHAKK 812          
BLAST of Ggra3039.t1 vs. uniprot
Match: B9RY76 (DNA repair protein REV1 n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RY76_RICCO)

HSP 1 Score: 309 bits (792), Expect = 4.130e-86
Identity = 198/536 (36.94%), Postives = 296/536 (55.22%), Query Frame = 0
Query:    3 RDDALTVAPTAAQSHPKQSSPFWSDPRPSN-RNPNFVRDYFQSSRLHFIGSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFASVAVKNDPSLRGKCIAVCH-----GGGEISSCSYEARSYGVRAGMFAKDARKLCPQLLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADTSQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRVRPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRNFGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNKFITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVVSRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFGDLKFDHSRTAVRGIKRIDTFFTAASRDVPRGSHKDFVPTNESRKKAATTLGLYPPNIGNENVEGNRRSPLNGSDSDEILPAP 532
            RD ++   PT A + P       S+PR S   +PNFV +YF+SSRLHFIG++R RY      ++ +      ++ +S    NS + VI+H+DMDCFF SV ++N P L  K +AVCH     G  EISS +Y AR+YG++AG+F +DA+ LCPQL+  PY+F  YEE++ Q Y++ + +    V+AVS DEA+LD T     D S  + E LA  IR  I   TGCTASAGI  + L++RLAT+ AKP+GQ  +RPEKV EY++ L +  LPG+G    +K+ +  +++   LR  S   L ++FG + G+   + +R ID R V  ++  KSIGAE +WG+RF   +D +   F+ ++  EV+ R+   G  G    +K+ +K+ K +    K++G G C  +S    VP    T   +D L+    ++F    +   E RG+GLQV  L+  D+     R ++R      ++ T+AS  +    H      N    + A +  L+P   G      N  S  NG  S   +PAP
Sbjct:  289 RDHSIESTPTPAIARP-------SNPRHSTLEDPNFVENYFKSSRLHFIGTWRNRYRKRFPRLSSDFRCRSLTIDAS---DNSHKTVIMHVDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARAYGIKAGIFVRDAKALCPQLIIFPYNFQAYEEVADQFYNVLHKHCNK-VQAVSCDEAFLDIT-----DFSGGDPEVLASTIRKEIFETTGCTASAGIARNMLLSRLATRTAKPDGQCYIRPEKVDEYLNELSIKTLPGIGHVLEEKLKKKNVRTCGQLRLISKDSLHKDFGKKTGEMLWNYSRGIDNRLVGVIQESKSIGAEVNWGVRFRNLQDSQ--HFLLNLCKEVSLRLQGCGVHGRTFTLKI-KKRRKDAGEPTKYMGCGDCENLSHSMTVP--VATDD-VDVLQRIAKQLFGSFNLDVKEIRGVGLQVSKLENADISRGLERNSLR------SWLTSAS-TMTEERHS----INSISTRRADSGNLFPHQTGGSAEMNNNFS--NGEASFNHVPAP 789          
The following BLAST results are available for this feature:
BLAST of Ggra3039.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYY60.000e+061.82DNA polymerase kappa n=1 Tax=Gracilariopsis chorda... [more]
R7QH657.580e-24547.08UmuC domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S3A8F81.730e-11446.56DNA polymerase kappa (Fragment) n=3 Tax=Rhodosorus... [more]
A0A087ST141.550e-9042.38DNA repair protein REV1 n=1 Tax=Auxenochlorella pr... [more]
A0A1D1ZNW19.890e-8941.80Uncharacterized protein n=1 Tax=Auxenochlorella pr... [more]
A0A7S1XH281.670e-8839.57DNA repair protein REV1 (Fragment) n=2 Tax=Compsop... [more]
A0A6U9RMQ71.690e-8638.82DNA repair protein REV1 n=1 Tax=Picocystis salinar... [more]
A0A2P6TQ913.810e-8641.71DNA polymerase kappa n=1 Tax=Chlorella sorokiniana... [more]
M2XRA84.050e-8632.69DNA repair protein REV1 n=1 Tax=Galdieria sulphura... [more]
B9RY764.130e-8636.94DNA repair protein REV1 n=1 Tax=Ricinus communis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.1490coord: 35..70
e-value: 1.2E-6
score: 30.1
NoneNo IPR availableGENE3D1.10.150.20coord: 252..315
e-value: 1.8E-14
score: 55.5
NoneNo IPR availableGENE3D3.40.1170.60coord: 106..155
e-value: 8.9E-58
score: 196.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 511..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..742
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 647..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 724..740
NoneNo IPR availablePANTHERPTHR45990DNA REPAIR PROTEIN REV1coord: 22..861
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 89..251
e-value: 8.9E-58
score: 196.6
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 326..453
e-value: 9.0E-27
score: 95.6
IPR038401Rev1, C-terminal domain superfamilyGENE3D1.20.58.1280coord: 785..880
e-value: 4.6E-5
score: 25.8
IPR001126UmuC domainPFAMPF00817IMScoord: 92..240
e-value: 1.5E-41
score: 141.8
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 89..271
score: 53.121506
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 327..447
e-value: 4.0E-5
score: 24.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 77..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:1023106..1025808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3039.t1Ggra3039.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 1023106..1025808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3039.t1 ID=Ggra3039.t1|Name=Ggra3039.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=901bp
MQRDDALTVAPTAAQSHPKQSSPFWSDPRPSNRNPNFVRDYFQSSRLHFI
GSFRARYESMMVSVAKNLNVNPGSLISSAPKPNSRERVIIHIDMDCFFAS
VAVKNDPSLRGKCIAVCHGGGEISSCSYEARSYGVRAGMFAKDARKLCPQ
LLSVPYHFPIYEEISIQIYSLFYDYPGVYVEAVSVDEAYLDATEAVAADT
SQLNAESLAENIRSRIVMVTGCTASAGIGPSKLIARLATKAAKPNGQLRV
RPEKVIEYIDTLKVSDLPGVGWRTSKKMTELGIKSLPDLRNKSLTFLQRN
FGDRQGQTFHDLARAIDRRPVEPLKPRKSIGAEASWGIRFEQNEDEKLNK
FITDMASEVASRVANAGASGSKMAVKLYRKKPKSSMVGYKFLGHGPCTVV
SRIHNVPRNCGTQTLIDALRGSCMRVFSETKIRNDEFRGIGLQVLDLKFG
DLKFDHSRTAVRGIKRIDTFFTAASRDVPRGSHKDFVPTNESRKKAATTL
GLYPPNIGNENVEGNRRSPLNGSDSDEILPAPEQNTEQEMSRRHVEGSKA
PMKNHDVFRMEIDEDENDEDEIEAHQTNHVSHVQQVDKTLAQKIPPGWDR
TVFKALPLSLQTELLRNTSNQSLSGRAQERPGQGDAPMDPARRDSKKRAS
THKRNKHLSKLSKRPRKKHQAQITMTQFANIRELRDKGNDVLDAEEFRSK
PLRECIELLQDLNHGRRHSTLGGLRRKNSGNQTSKSVTFLDGDKSDAIGD
NDAFDIPSPPSMSSDSDMENVDKIVKILEKEGIEHKQIYANEDIEAFAEE
LYAWMSDTAGDVKSAHVELLRGRLMENVRLKQLEHVSENVRLLRKFAESE
SLTGWRRSVNTLVEEVREETRRRHGLDLTLPPLFSDLNTEAPLIINTQSK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR038401Rev1_C_sf
IPR001126UmuC
IPR017961DNA_pol_Y-fam_little_finger
IPR043502DNA/RNA_pol_sf