Ggra3036.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3036.t1
Unique NameGgra3036.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length162
Homology
BLAST of Ggra3036.t1 vs. uniprot
Match: A0A2V3J0A2 (Endoplasmic reticulum transmembrane protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A2_9FLOR)

HSP 1 Score: 239 bits (611), Expect = 8.090e-79
Identity = 116/154 (75.32%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    1 MSLLWKSVSIVLVVELVILLALCAPLPWGVRKNISRWIFRVNAREKLNTLGKYVTFALFLALAESINGLRIAAERSQRQQEGQFLQDPGFVTLATDYRWQKVRAERNFYLAGFAIVALVAIARLVRLASIEVQLRDRIKSYNGNKPISETGETI 154
            MSL+W+SVS+VL++E+++LLALCAPLPWGVRKNISRWIFRV ARE+LN++ KY+TFALF+ALAES+N LRI AER++ Q EG   QDP ++T ATDYRW+KVRAERNFYLA F+I+ LVAI RLVRLA+IEVQLR RIKSYNGNKPISETGET+
Sbjct:    1 MSLMWRSVSVVLLIEVIVLLALCAPLPWGVRKNISRWIFRVKARERLNSIIKYITFALFMALAESLNALRIVAERTREQNEGHLTQDPVYITPATDYRWKKVRAERNFYLASFSIITLVAITRLVRLAAIEVQLRQRIKSYNGNKPISETGETL 154          
BLAST of Ggra3036.t1 vs. uniprot
Match: B-cell receptor-associated protein 31-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC6BA (B-cell receptor-associated protein 31-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC6BA)

HSP 1 Score: 102 bits (253), Expect = 3.180e-24
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    2 SLLWKSVSIVLVVELVILLALCAPLPWGVRKNISRWIFRVNAREKLNTLGKYVTFALFLALAESINGLRIAAERSQRQQEGQFLQDPGFVTL----ATDYRWQKVRAERNFYLAGFAIVALVAIARLVRLASIEVQLRDRIK 139
            S LW  V++VL +EL++L    APLPWGVRKN++R+  R         + +YV F L LA+ ESI+GL+   +  Q   + +   D          A D+RWQ V A+RN YLAGF +V L  ++R++ L S E  LRD+IK
Sbjct:    3 SFLWACVTVVLALELLVLSLFVAPLPWGVRKNVTRFFQRPAVEAAFQRVLRYVGFGLALAIVESIHGLQNLHKVIQFSVDERVSLDASANVASDVSAHDFRWQSVLAQRNLYLAGFCLVLLFTLSRVIELVSHETALRDKIK 144          
BLAST of Ggra3036.t1 vs. uniprot
Match: A0A5J4Z992 (Endoplasmic reticulum transmembrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z992_PORPP)

HSP 1 Score: 70.5 bits (171), Expect = 2.750e-12
Identity = 44/138 (31.88%), Postives = 73/138 (52.90%), Query Frame = 0
Query:    2 SLLWKSVSIVLVVELVILLALCAPLPWGVRKNISRWIFRVNAREKLNTLGKYVTFALFLALAESINGLRIAAERSQRQQEGQFLQDPGFVTLATDYRWQKVRAERNFYLAGFAIVALVAIARLVRLASIEVQLRDRIK 139
            S++W +V  +LV ELV+++ LC PLPWG+RK + + +        + T   ++  AL LA A S+  +    E+S   +          V   +  R +K R+ERN YL+ F +   + + RL  L + EVQLR +++
Sbjct:    4 SIVWMAVFCLLVFELVLVVLLCLPLPWGMRKFVVKLVGSAKGIHHVQTGIVFLLLALTLAFASSVQEMLFVTEKSNAYKFELSSASGYEVWEYSKLRQEKFRSERNMYLSLFCLTLSLVLRRLFELFANEVQLRSQLE 141          
BLAST of Ggra3036.t1 vs. uniprot
Match: A0A1E7FYE0 (Endoplasmic reticulum transmembrane protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FYE0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.150e-6
Identity = 43/140 (30.71%), Postives = 69/140 (49.29%), Query Frame = 0
Query:    2 SLLWKSVSIVLVVELVILLALCAPLPWGVRKNISRWIFRVNAREKLNTLGKYVTFALFLALAESINGLR--IAAERSQRQQEGQFLQDPGFVTLATDYRWQKVRAERNFYLAGFAIVALVAIARLVRLASIEVQLRDRIK 139
            SLLW SV ++L+ ELV+ L L  P+P   R  I   + R+  +++L      + FAL  AL ++   L+     E +++QQ  Q L D   +      + ++ +  RN YL GFA   L  I RL  L     +L  +++
Sbjct:    4 SLLWTSVFVLLMFELVVTLILVLPIPRKWRNWICLKVSRLELKKRLRVPLIGIFFALLFALLDTTTYLQHIYLKENNEQQQRQQRLFDSSVLDRHL-IKEKEYKTGRNMYLVGFAFTLLFVIGRLTELMQEHAELEQQVE 142          
The following BLAST results are available for this feature:
BLAST of Ggra3036.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J0A28.090e-7975.32Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
B-cell receptor-associated protein 31-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC6BA3.180e-2441.55B-cell receptor-associated protein 31-like n=1 Tax... [more]
A0A5J4Z9922.750e-1231.88Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
A0A1E7FYE01.150e-630.71Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040463BAP29/BAP31, transmembrane domainPFAMPF05529Bap31coord: 1..139
e-value: 1.5E-20
score: 73.5
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..135
NoneNo IPR availablePANTHERPTHR12701:SF50LP10861Pcoord: 1..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..125
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:1019210..1019695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3036.t1Ggra3036.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 1019210..1019695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3036.t1 ID=Ggra3036.t1|Name=Ggra3036.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MSLLWKSVSIVLVVELVILLALCAPLPWGVRKNISRWIFRVNAREKLNTL
GKYVTFALFLALAESINGLRIAAERSQRQQEGQFLQDPGFVTLATDYRWQ
KVRAERNFYLAGFAIVALVAIARLVRLASIEVQLRDRIKSYNGNKPISET
GETIGEESKNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040463BAP29/BAP31_N
IPR008417BAP29/BAP31