Ggra2930.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2930.t1
Unique NameGgra2930.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length161
Homology
[Close]
BLAST of Ggra2930.t1 vs. uniprot
Match: A0A2V3IW37 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW37_9FLOR)

HSP 1 Score: 209 bits (532), Expect = 8.030e-67
Identity = 106/160 (66.25%), Postives = 122/160 (76.25%), Query Frame = 0 
Query:    1 MASLPPKAVQISPNSRRRQLRNLLESHREDRLRFQQRAELRATPVDMSDRLHAALSEIRRIEREFHTFRTGANARLAXXXXXXXXXXXXXXXXXXGHATKPTEKELEIDRLKHASIKPPYSSSRERKSLRLPFMAETESKERRRTIRIPIRFSRKWSTCF 160
            MA+LPP + Q SP SR RQLR LLE+HR DRLR QQRAELRA P D+S +L  AL+E+RRIEREFHTFR GANARLA                  GH TKPTE+ELE++RLKHAS+KPPYS SRER+SLR+PF  E E K+RRR++RIPIRFSRKWSTCF
Sbjct:    1 MATLPPSSAQASPKSRHRQLRTLLEAHRADRLRIQQRAELRANPTDLSQKLQEALAEVRRIEREFHTFRAGANARLAAALDENEKLRKSLETLRVGHETKPTERELEVERLKHASVKPPYSCSRERRSLRIPFKGEPEQKDRRRSVRIPIRFSRKWSTCF 160
The following BLAST results are available for this feature:
BLAST of Ggra2930.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IW378.030e-6766.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..96
NoneNo IPR availableCOILSCoilCoilcoord: 17..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:537773..538255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2930.t1Ggra2930.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 537773..538255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2930.t1 ID=Ggra2930.t1|Name=Ggra2930.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=161bp
MASLPPKAVQISPNSRRRQLRNLLESHREDRLRFQQRAELRATPVDMSDR
LHAALSEIRRIEREFHTFRTGANARLAAALDENEKLRKSLEKMRTGHATK
PTEKELEIDRLKHASIKPPYSSSRERKSLRLPFMAETESKERRRTIRIPI
RFSRKWSTCF*
back to top