Ggra2806.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2806.t1
Unique NameGgra2806.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length280
Homology
BLAST of Ggra2806.t1 vs. uniprot
Match: A0A2V3IL84 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL84_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 4.570e-42
Identity = 92/226 (40.71%), Postives = 131/226 (57.96%), Query Frame = 0
Query:   48 QVVEGPMYMMFTVDSNNMPPYDLELYVFAICDLPRVETTGKEFKIVSVMCSIANLKREITLDAEWRAAQPATQPLKVMEKSYPGLNLSELGIRSIMVLDLARTLSQDACGDSYVAYLPMSQISRTSVTIICTLGGITISSLLAAALSLLISWKTFNWNGSYQRLLNVALSSDSIELKSRWKAATAPNANVVIEHSSGNLERTTYD-----IHAVPRDAMSNPVPKA 268
            Q+ EGP+Y +  +  +    Y      F  C +PRV+     F++V   CS+A L+R       +R  +P    L+ ++ ++  +++S LG  SIM+ DLA TL    CGD+YVAYLP S ISRTSV I+C LG   ++S +AA +SL I+  TFNWNGSYQR++++A SS+ + +  R   A    A+VVIE      ER T+      +  VP DA SNPVPKA
Sbjct:   93 QITEGPLYFVICIFGHGTENY--MKCAFGKCAVPRVDLPYSRFRLVRGNCSVAFLERSTAKSGIFRGFEPEASSLRYLDLAFGHVDVSFLGQGSIMINDLAITLQSKPCGDTYVAYLPPSNISRTSVVIVCALGITALASCVAAIMSLFITRHTFNWNGSYQRVVSLAASSEQMRVFGRNDFAAVATADVVIE------ERPTHHGKGLCVRIVPTDATSNPVPKA 310          
BLAST of Ggra2806.t1 vs. uniprot
Match: A0A2V3J1R8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1R8_9FLOR)

HSP 1 Score: 105 bits (261), Expect = 2.410e-22
Identity = 60/159 (37.74%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   45 NDNQVVEGPMYMMFTVDSNNMPPYDLELYVFAICDLPRVETTGKEFKIVSVMCSIANLKREITLDAEWRAAQPATQPLKVMEKSYPGLNLSELGIRSIMVLDLARTLSQDACGDSYVAYLPMSQISRTSVTIICTLGGITISSLLAAALSLLISWKTFN 203
            N+  +V+GP Y++    +  +    +E   F+ C +P VE    E   V   CS+A ++R+      +R+   +  PLK ++ S+ GL++SELG RS MV DLA  L    CGD+YVAYLP S++S  S+ IIC+LG I++   + A +S  I+  TFN
Sbjct:  234 NNGAIVDGPFYVIVCTHNPLVNENKMEKCAFSRCAVPHVELQPGEVVSVRGNCSVATIERQAFKAGAFRSYYGSASPLKYLDISFKGLDVSELGKRSQMVGDLAFILRSRPCGDTYVAYLPPSEVSWVSIAIICSLGTISLVVSVVAIMSFSITRNTFN 392          
BLAST of Ggra2806.t1 vs. uniprot
Match: A0A2V3IYY8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY8_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 1.480e-20
Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = 0
Query:  125 MEKSYPGLNLSELGIRSIMVLDLARTLSQDACGDSYVAYLPMSQISRTSVTIICTLGGITISSLLAAALSLLISWKTFNWNGSYQRLLNVALSSDSIELKSRWKAATAPNANVVIEHSSGNLERTTYD-----IHAVPRDAMSNPV 265
            +++++  L+++ELG RSIMV DL+  L    C ++YVAYLP+S++S  S+ I+C+LG I++   +AA +S  ++  T NWNGS  R++N+A SSD I L          + +VV+E      ER TY      +H V     S  V
Sbjct:    3 LDEAFNALDVAELGQRSIMVSDLSEILRSPKCSNTYVAYLPLSKVSWVSIAILCSLGSISVFWCVAAIISFFVTKDTINWNGSCDRVINLAASSDPIGLCDHKDFTAVGSTDVVME------ERETYGGPIQHVHIVSASVSSQTV 142          
The following BLAST results are available for this feature:
BLAST of Ggra2806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IL844.570e-4240.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1R82.410e-2237.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYY81.480e-2037.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..279
NoneNo IPR availableTMHMMTMhelixcoord: 176..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000123_piloncontigtig00000123_pilon:337746..338585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2806.t1Ggra2806.t1Gracilaria gracilis GNS1m malemRNAtig00000123_pilon 337746..338585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2806.t1 ID=Ggra2806.t1|Name=Ggra2806.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=280bp
MNISDGYDREHIEFDDDYFYGEAFRSLSMQHTIVVFAVDKYSSENDNQVV
EGPMYMMFTVDSNNMPPYDLELYVFAICDLPRVETTGKEFKIVSVMCSIA
NLKREITLDAEWRAAQPATQPLKVMEKSYPGLNLSELGIRSIMVLDLART
LSQDACGDSYVAYLPMSQISRTSVTIICTLGGITISSLLAAALSLLISWK
TFNWNGSYQRLLNVALSSDSIELKSRWKAATAPNANVVIEHSSGNLERTT
YDIHAVPRDAMSNPVPKAEVNKIEAFGTG*
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