Ggra2624.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2624.t1
Unique NameGgra2624.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length457
Homology
BLAST of Ggra2624.t1 vs. uniprot
Match: A0A2V3J2W3 (Tubulin beta chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2W3_9FLOR)

HSP 1 Score: 750 bits (1936), Expect = 3.310e-271
Identity = 380/460 (82.61%), Postives = 407/460 (88.48%), Query Frame = 0
Query:    1 MSRGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPAND--YGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDARVGEYPED--SFVDDGYDDEEIPEEEPVE 456
            MSRGIVCLQAGQCGNQMGTAFW TIS+EHG++  G Y G DE +KERIGVYY + SEGRFVPRSVMLDLETGV+DNI+AGP+G LF PENFVCGQSGAGNNWAKGHYTEGAELID+VLDRV HE EACDVLQGFQVSHSLGGGTGSGLGTLLVSKIRE+YPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPA+D  Y  LNKLV+SVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSG GS++YKS +VPE+T QMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRK+QDKN++QFV                     T TFIGNSTAIQ+MFRRVGDQFS+MFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEY QYQDA  G+  +D   + ++ YDD E+PEEEPVE
Sbjct:    1 MSRGIVCLQAGQCGNQMGTAFWTTISDEHGINPNGEYTGHDENQKERIGVYYTQSSEGRFVPRSVMLDLETGVLDNIKAGPLGQLFRPENFVCGQSGAGNNWAKGHYTEGAELIDSVLDRVRHEAEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREDYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPASDNNYENLNKLVASVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGPGSQVYKSLSVPEITSQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKIQDKNASQFV---------------------TGTFIGNSTAIQEMFRRVGDQFSVMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYTQYQDATAGDDQDDVGEYREEAYDD-ELPEEEPVE 438          
BLAST of Ggra2624.t1 vs. uniprot
Match: R7Q9V6 (Tubulin beta chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9V6_CHOCR)

HSP 1 Score: 718 bits (1853), Expect = 2.810e-258
Identity = 347/429 (80.89%), Postives = 381/429 (88.81%), Query Frame = 0
Query:    1 MSRGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDA 429
            MSRGIV LQAGQCGNQMG AFW+TISEEHG+D  G+Y G+ +F++ER+GVYY EGSEGRFVPR+VMLDLE  V+D+I+A  +G +F P+NFV GQSGAGNNWAKGHYTEGAELID VLD V  E E+CDVLQGFQVSHSLGGGTGSG+GTLLVSKIREEYPDRML TYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICT TLK+P   Y  LN LVS VMSG+TCSLRFPGQLNADLRKLAVNL+PFPRLHFFVVGYAPLSG+GSE YKS +VPELT Q+FE  NMMADC P  GRYLTAAAYFRG VST+EVEDEMRK+QDKNS+QFV+WIPNN KTSVC+V PPG K+ ATFIGNST IQD+F RVG QFS MF+RKAFLHWYTGEGMDEMEF EAE+N+QDLI EY QYQ+A
Sbjct:    1 MSRGIVSLQAGQCGNQMGAAFWQTISEEHGIDSSGSYAGESDFQRERLGVYYSEGSEGRFVPRAVMLDLEPAVLDHIKASRLGGIFHPDNFVFGQSGAGNNWAKGHYTEGAELIDTVLDVVRKEAESCDVLQGFQVSHSLGGGTGSGMGTLLVSKIREEYPDRMLCTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTKTLKSPNPSYPELNHLVSRVMSGITCSLRFPGQLNADLRKLAVNLVPFPRLHFFVVGYAPLSGNGSEKYKSMSVPELTTQLFEPHNMMADCDPRNGRYLTAAAYFRGTVSTKEVEDEMRKIQDKNSSQFVEWIPNNAKTSVCDVAPPGMKVAATFIGNSTTIQDLFERVGGQFSSMFRRKAFLHWYTGEGMDEMEFSEAEANLQDLISEYTQYQEA 429          
BLAST of Ggra2624.t1 vs. uniprot
Match: A0A7S1ESU4 (Tubulin beta chain n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESU4_9RHOD)

HSP 1 Score: 651 bits (1679), Expect = 5.070e-232
Identity = 316/432 (73.15%), Postives = 360/432 (83.33%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKK-ERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDARVGE 433
            R IV +QAGQCGNQ+G  FWETIS EHG+D  G Y G D  ++ ERI VYY E   GR+VPR++++DLE GV+D IR  P G L+ P+NFV GQSGAGNNWAKGHYTEGAELIDNVLD V  E E CD LQGFQ+SHSLGGGTGSG+GTLLVSKIREE+P+RM+ TYSVMPSPKVSDTVVEPYNCTLS+HQL+ENADAVF+IDNEALY IC  TLK     Y  LNKLVS VMSG+TCSLRFPGQLNADLRKLAVNLIPFPRLHFF++GYAPL+  G++ Y +  V ELT QMF++ NMMA C P  GRYLTAAAYFRGKVST+EVED+MR +Q+KNS  FVDWIPNN KTSVC++ P GQK +A FIGNSTAIQD+F+RVG+QF+LMF+RKAFLHWYTGEGMDEMEF EAESNM DL+ EY QYQ+A   E
Sbjct:    2 REIVHIQAGQCGNQIGAKFWETISSEHGIDPSGHYAGTDRDQQLERINVYYNEAEGGRYVPRAILMDLEPGVVDTIRGSPFGELYRPDNFVFGQSGAGNNWAKGHYTEGAELIDNVLDVVRREAENCDCLQGFQISHSLGGGTGSGMGTLLVSKIREEFPERMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFAIDNEALYEICFRTLKLSNPTYADLNKLVSGVMSGITCSLRFPGQLNADLRKLAVNLIPFPRLHFFMIGYAPLTSVGNQGYTATNVHELTQQMFDANNMMAACDPRHGRYLTAAAYFRGKVSTKEVEDQMRNMQNKNSTYFVDWIPNNIKTSVCDIAPEGQKCSAAFIGNSTAIQDIFKRVGEQFTLMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAQE 433          
BLAST of Ggra2624.t1 vs. uniprot
Match: TBB (Tubulin beta chain n=6 Tax=Bangiaceae TaxID=31345 RepID=TBB_NEOYE)

HSP 1 Score: 650 bits (1677), Expect = 1.830e-231
Identity = 315/442 (71.27%), Postives = 363/442 (82.13%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDARV-GEYPEDSFVDDG 443
            R IV +QAGQCGNQ+G  FWE ISEEHG+D  G Y G  + + +R  VYY EGS GR+VPR+V++DLE GV+D I+AGP G L+ P+NFV GQSGAGNNWAKGHYTEGAEL+D+VLD V  E E CD LQGFQV+HSLGGGTGSG+GTLLVSKIREE+PDRM+ TYSVMPSPKVSDTVVEPYNCTLS+HQL+ENADAVF IDNEALYNIC NTLK P   Y  LNKLVS VMSG+T SLRFPGQLN+DLRKLAVNL+PFPRLHFF++GYAPLS  G   Y++ TV +LT QMF+ +NMMADC P  GRYLTA+AYFRGKVST+EVE++M  +Q KNS QF+DWIPN  K SVC+V P G+ ++A FIGNSTAIQD+F+RVG  FS MFKRKAFLHWYTGEGMDEMEF EAESNM DL+ E  QY+ A V GE  ED + + G
Sbjct:    2 REIVHIQAGQCGNQIGAKFWEVISEEHGIDSSGAYIGTSDLQLDRAEVYYNEGSGGRYVPRAVLVDLEPGVLDTIKAGPHGGLYRPDNFVAGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGYAPLSADGVTAYRAKTVADLTKQMFDPKNMMADCDPRNGRYLTASAYFRGKVSTKEVEEQMDAIQTKNSGQFIDWIPNAIKASVCDVAPTGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLVSELQQYEAATVEGEEEEDEYAEGG 443          
BLAST of Ggra2624.t1 vs. uniprot
Match: A0A7S1XBS8 (Tubulin beta chain n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBS8_9RHOD)

HSP 1 Score: 644 bits (1660), Expect = 4.240e-229
Identity = 306/428 (71.50%), Postives = 358/428 (83.64%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDAR 430
            R IV +QAGQCGNQ+G  FWETISEEHG+D  G Y G  + + +RI VYY EG+ GRFVPR+V++DLE GV+D ++A P G ++ P+NFV GQSGAGNNWAKGHYTEGAELID+VLD V  E E CD LQGFQ++HSLGGGTGSG+GTLLVSKIREEYPDRM+ TYSVMPSPKVSDTVVEPYNCTLS+HQL+ENAD VF IDNEALY+IC  TLK     Y  LN+LVS VMSG+TCSLRFPGQLNADLRKLAVNLIPFPRLHFF++GYAPL+   S+ Y++  VPELT QMF++ NMMA C P  GRYLTAAAYFRGKVST EVED+M  +Q+KNS+ FVDWIPNN K SVC++PP   K +A FIGNSTAIQ++F+RVG+ F++MF+RKAF+HWYTGEGMDEMEF EAESNM DL+ EY QY+ A+
Sbjct:    2 REIVHIQAGQCGNQIGAKFWETISEEHGIDSAGNYVGTSDLQLDRIEVYYNEGATGRFVPRAVLMDLEPGVVDAVKASPYGGIYKPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQITHSLGGGTGSGMGTLLVSKIREEYPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADEVFCIDNEALYDICHRTLKLSNPSYSDLNRLVSGVMSGITCSLRFPGQLNADLRKLAVNLIPFPRLHFFMIGYAPLTSLSSQSYRALNVPELTQQMFDANNMMAACDPRHGRYLTAAAYFRGKVSTREVEDQMLNIQNKNSSHFVDWIPNNIKMSVCDIPPKELKCSAAFIGNSTAIQEIFKRVGEMFTVMFRRKAFVHWYTGEGMDEMEFTEAESNMSDLVAEYEQYEQAQ 429          
BLAST of Ggra2624.t1 vs. uniprot
Match: A0A5J4YKG6 (Tubulin beta chain n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKG6_PORPP)

HSP 1 Score: 640 bits (1652), Expect = 6.980e-228
Identity = 315/444 (70.95%), Postives = 365/444 (82.21%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKK-ERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDARVGEYPEDSFVDDGYD 445
            R IV +QAGQCGNQ+G+ FWETIS EHG+D  G + G D  ++ ER  VYY E   GR+VPR+VM+DLE GV++ IR+   G L+ P+NFV GQSGAGNNWAKGHYTEGAELID VLD V  E E CD LQGFQ+SHSLGGGTGSG+GTLLVSKIREE+PDRM+ TYSVMPSPKVSDTVVEPYN TL+IHQL+ENADAVF+IDNEALY+IC  TLK     Y  LNKLV+ VMSG+TCSLRFPGQLNADLRKLAVNLIPFPRLHFF++GYAPL+  GS+ Y++  V ELT QMF+S NMMA C P  GRYLTAAAYFRGKVST+EVED+M  +Q+KNS+ FVDWIPNN KTSVC++ P GQK +A FIGNSTAIQ++F+RVGDQF+LMF+RKAFLHWY GEGMDEMEF EAESNM DL+ EY QYQ+A   +   D   ++GYD
Sbjct:    2 REIVHIQAGQCGNQIGSMFWETISAEHGIDPSGKFVGSDRVQQLERANVYYNEAEGGRYVPRAVMMDLEPGVVETIRSSKFGQLYRPDNFVHGQSGAGNNWAKGHYTEGAELIDQVLDVVRREAENCDCLQGFQISHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNATLAIHQLVENADAVFAIDNEALYDICNKTLKLANPSYSDLNKLVAGVMSGITCSLRFPGQLNADLRKLAVNLIPFPRLHFFMIGYAPLTSVGSQEYRASNVHELTQQMFDSGNMMAACDPRHGRYLTAAAYFRGKVSTKEVEDQMLNMQNKNSSYFVDWIPNNIKTSVCDIAPEGQKCSAAFIGNSTAIQEIFKRVGDQFTLMFRRKAFLHWYAGEGMDEMEFSEAESNMNDLVSEYQQYQEASARDDVGDD--EEGYD 443          
BLAST of Ggra2624.t1 vs. uniprot
Match: J7G3I8 (Tubulin beta chain n=3 Tax=Cryptophyceae TaxID=3027 RepID=J7G3I8_9CRYP)

HSP 1 Score: 637 bits (1643), Expect = 1.460e-226
Identity = 306/447 (68.46%), Postives = 369/447 (82.55%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDARVGEYPEDSFVDDGYDDEEI 449
            R IV +QAGQCGNQ+G  FWE IS+EHG+D  G Y+G  + + ERI VYY E +  RFVPR++++DLE G +D++RAG  G LF P+NFV GQSGAGNNWAKGHYTEGAELID+V+D V  E+E CD LQGFQ++HSLGGGTGSG+GTLL+SKIREEYPDRM+ TYSV+PSPKVSDTVVEPYNCTLSIHQL+ENAD VF IDNEALY+IC  TLK     YG LN LVS+VMSG+TCSLRFPGQLNADLRKLAVNLIPFPRLHFF+VG+APL   GS+ Y++ TV ELT QMF+S+NMMA C P  GRYLTAAAYFRG++ST+EV+D+M  VQ+K S+ FV+WIP+N K+SVC++PP G K+++ FIGNST+IQD+F+RVG+ F  MF++KAFLHWYTGEGMDEMEF EAESNM DL+ EY QYQDA+  E         GY+D+++
Sbjct:    2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPFGNYNGTHDNQLERINVYYNEATGDRFVPRAILIDLEPGTMDSVRAGTYGKLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVMDVVRKESEQCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNCTLSIHQLVENADEVFCIDNEALYDICFRTLKLVNPSYGDLNHLVSAVMSGITCSLRFPGQLNADLRKLAVNLIPFPRLHFFIVGFAPLGSRGSQQYRALTVSELTQQMFDSKNMMAACDPKHGRYLTAAAYFRGRMSTKEVDDQMISVQNKQSDHFVEWIPHNIKSSVCDIPPKGIKMSSAFIGNSTSIQDLFKRVGEHFQAMFRKKAFLHWYTGEGMDEMEFTEAESNMHDLVSEYQQYQDAKTDEI--------GYEDDDL 440          
BLAST of Ggra2624.t1 vs. uniprot
Match: M2XB00 (Tubulin beta chain n=3 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XB00_GALSU)

HSP 1 Score: 637 bits (1642), Expect = 2.320e-226
Identity = 300/427 (70.26%), Postives = 360/427 (84.31%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDA 429
            R IV +QAGQCGNQ+G+ FWE IS EHG+   G Y+GD   + +RI VYY E +  R+VPR+V++DLE G ID ++A   G LF P+NFV GQSGAGNNWAKGHYTEGAELIDNVLD V  E EACD LQGFQ++HSLGGGTGSGLGTLL+SKIREEYPDRM+ TYSV+PSPKVSDTVVEPYNCTLS+HQL+ENAD VF IDNEALY+IC  TLK  +  Y  LN+LVS+VMSG+TC+LRFPGQLNADLRKLA NLIPFPRLHFF++G+APLS  GS+ Y+S +V ELT QMF+SRNMMA C P  GRYLTAAAYFRG +ST++++D+M  +Q+KNS+ FV+WIPNN K+S+C++PP G K +ATF+GNST+IQ++F+RVG+QF+ MF+RKAFLHWYTGEGMDEMEF EAESNM DL+ EY QYQ+A
Sbjct:    2 REIVHIQAGQCGNQIGSKFWEVISREHGISQTGLYEGDSPSQLDRINVYYNEATGARYVPRAVLIDLEPGTIDAVKASLYGKLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDNVLDVVRREAEACDCLQGFQITHSLGGGTGSGLGTLLISKIREEYPDRMMGTYSVVPSPKVSDTVVEPYNCTLSVHQLVENADEVFCIDNEALYDICLRTLKISSPSYSDLNQLVSAVMSGITCTLRFPGQLNADLRKLATNLIPFPRLHFFMIGFAPLSSPGSQQYRSASVSELTQQMFDSRNMMAACDPRHGRYLTAAAYFRGNMSTQDIDDQMFNIQNKNSSYFVEWIPNNIKSSLCDIPPSGMKKSATFVGNSTSIQELFQRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428          
BLAST of Ggra2624.t1 vs. uniprot
Match: tubulin beta-2A chain-like n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B8120C (tubulin beta-2A chain-like n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B8120C)

HSP 1 Score: 635 bits (1639), Expect = 9.200e-226
Identity = 302/443 (68.17%), Postives = 367/443 (82.84%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDA---RVGEYPEDSFVDD 442
            R IV +QAGQCGNQ+G  FWE IS+EHG+D  G+Y GD + + ERI VYY E S  +FVPR++++DLE G +D++R+GP G LF P+NFV GQSGAGNNWAKGHYTEGAEL+D+VLD V  E+E CD LQGFQ++HSLGGGTGSGLGTLL+SKIREEYPDR++VT+SVMPSPKVSDTVVEPYN TLS+HQL+EN D  FSIDNEALY+IC  TLK     YG LN LVS+ MSGVT  LRFPGQLNADLRKLAVN++PFPRLHFF+ G+APL+  GS+ Y++ +VPELT QMF+++NMMA C P  GRYLT AA FRG++S +EV+++M  VQ+KNS+ FV+WIPNN KT+VC++PP G K++ATFIGNSTAIQ++FRR+ +QF+ MF+RKAFLHWYTGEGMDEMEF EAESNM DL+ EY QYQDA    +GEY ED   D+
Sbjct:    2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYQGDSDLQLERINVYYNEASGSKFVPRAILVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESENCDCLQGFQLTHSLGGGTGSGLGTLLISKIREEYPDRIMVTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETFSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEMGEYEEDELEDE 444          
BLAST of Ggra2624.t1 vs. uniprot
Match: I3JTH2 (Tubulin beta chain n=13 Tax=Clupeocephala TaxID=186625 RepID=I3JTH2_ORENI)

HSP 1 Score: 635 bits (1637), Expect = 1.850e-225
Identity = 302/443 (68.17%), Postives = 366/443 (82.62%), Query Frame = 0
Query:    3 RGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGVYYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGNNWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGTLLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAVFSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNADLRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNMMADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNTKTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYTGEGMDEMEFHEAESNMQDLIQEYIQYQDA---RVGEYPEDSFVDD 442
            R IV +QAGQCGNQ+G  FWE IS+EHG+D  G+Y GD E + ERI VYY E S  +FVPR++++DLE G +D++R+GP G LF P+NFV GQSGAGNNWAKGHYTEGAEL+D+VLD V  E+E CD LQGFQ++HSLGGGTGSG+GTLL+SKIREEYPDR++ T+SVMPSPKVSDTVVEPYN TLS+HQL+EN D  FSIDNEALY+IC  TLK     YG LN LVS+ MSGVT  LRFPGQLNADLRKLAVN++PFPRLHFF+ G+APL+  GS+ Y++ +VPELT QMF+++NMMA C P  GRYLT AA FRG++S +EV+++M  VQ+KNS+ FV+WIPNN KT+VC++PP G K++ATFIGNSTAIQ++FRR+ +QF+ MF+RKAFLHWYTGEGMDEMEF EAESNM DL+ EY QYQDA    +GEY ED   DD
Sbjct:    2 REIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGSYQGDSELQLERINVYYNEASGSKFVPRAILVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETFSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEMGEYEEDEMEDD 444          
The following BLAST results are available for this feature:
BLAST of Ggra2624.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2W33.310e-27182.61Tubulin beta chain n=1 Tax=Gracilariopsis chorda T... [more]
R7Q9V62.810e-25880.89Tubulin beta chain n=1 Tax=Chondrus crispus TaxID=... [more]
A0A7S1ESU45.070e-23273.15Tubulin beta chain n=1 Tax=Timspurckia oligopyreno... [more]
TBB1.830e-23171.27Tubulin beta chain n=6 Tax=Bangiaceae TaxID=31345 ... [more]
A0A7S1XBS84.240e-22971.50Tubulin beta chain n=1 Tax=Compsopogon caeruleus T... [more]
A0A5J4YKG66.980e-22870.95Tubulin beta chain n=1 Tax=Porphyridium purpureum ... [more]
J7G3I81.460e-22668.46Tubulin beta chain n=3 Tax=Cryptophyceae TaxID=302... [more]
M2XB002.320e-22670.26Tubulin beta chain n=3 Tax=Galdieria sulphuraria T... [more]
tubulin beta-2A chain-like n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B8120C9.200e-22668.17tubulin beta-2A chain-like n=1 Tax=Gadus morhua Ta... [more]
I3JTH21.850e-22568.17Tubulin beta chain n=13 Tax=Clupeocephala TaxID=18... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 409..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..456
NoneNo IPR availablePANTHERPTHR11588:SF306TUBULIN BETA CHAINcoord: 3..434
NoneNo IPR availableCDDcd02187beta_tubulincoord: 3..427
e-value: 0.0
score: 740.15
IPR000217TubulinPRINTSPR01161TUBULINcoord: 177..190
score: 72.74
coord: 371..399
score: 58.78
coord: 107..131
score: 55.23
coord: 133..151
score: 76.4
coord: 152..173
score: 49.22
coord: 11..31
score: 62.03
coord: 52..71
score: 46.71
coord: 191..211
score: 59.03
coord: 94..105
score: 76.26
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 3..434
IPR002453Beta tubulinPRINTSPR01163BETATUBULINcoord: 89..100
score: 79.19
coord: 330..344
score: 51.85
coord: 213..225
score: 36.18
coord: 312..330
score: 58.77
coord: 42..59
score: 44.16
coord: 231..240
score: 66.29
coord: 413..431
score: 67.01
coord: 246..259
score: 87.35
coord: 266..282
score: 53.31
coord: 348..371
score: 59.17
coord: 153..165
score: 77.54
coord: 109..127
score: 64.51
coord: 378..389
score: 56.57
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_C_4coord: 247..384
e-value: 3.5E-32
score: 122.9
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 262..382
e-value: 2.3E-36
score: 124.7
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulin_4coord: 48..245
e-value: 7.9E-61
score: 218.1
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 5..212
e-value: 5.6E-68
score: 229.0
IPR037103Tubulin/FtsZ-like, C-terminal domainGENE3D3.30.1330.20coord: 264..374
e-value: 3.8E-37
score: 129.0
IPR023123Tubulin, C-terminalGENE3D1.10.287.600Helix hairpin bincoord: 375..431
e-value: 2.1E-30
score: 106.2
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440Tubulin/FtsZ, GTPase domaincoord: 2..263
e-value: 3.7E-116
score: 389.2
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 3..244
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 141..147
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 245..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:973769..975139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2624.t1Ggra2624.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 973769..975139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2624.t1 ID=Ggra2624.t1|Name=Ggra2624.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=457bp
MSRGIVCLQAGQCGNQMGTAFWETISEEHGVDHKGTYDGDDEFKKERIGV
YYREGSEGRFVPRSVMLDLETGVIDNIRAGPMGALFDPENFVCGQSGAGN
NWAKGHYTEGAELIDNVLDRVHHETEACDVLQGFQVSHSLGGGTGSGLGT
LLVSKIREEYPDRMLVTYSVMPSPKVSDTVVEPYNCTLSIHQLIENADAV
FSIDNEALYNICTNTLKAPANDYGVLNKLVSSVMSGVTCSLRFPGQLNAD
LRKLAVNLIPFPRLHFFVVGYAPLSGSGSEIYKSHTVPELTFQMFESRNM
MADCKPHEGRYLTAAAYFRGKVSTEEVEDEMRKVQDKNSNQFVDWIPNNT
KTSVCNVPPPGQKITATFIGNSTAIQDMFRRVGDQFSLMFKRKAFLHWYT
GEGMDEMEFHEAESNMQDLIQEYIQYQDARVGEYPEDSFVDDGYDDEEIP
EEEPVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000217Tubulin
IPR002453Beta_tubulin
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR003008Tubulin_FtsZ_GTPase
IPR037103Tubulin/FtsZ-like_C
IPR023123Tubulin_C
IPR036525Tubulin/FtsZ_GTPase_sf
IPR017975Tubulin_CS
IPR008280Tub_FtsZ_C