Ggra2574.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2574.t1
Unique NameGgra2574.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length283
Homology
BLAST of Ggra2574.t1 vs. uniprot
Match: A0A2V3IKS9 (Malonyl-[acyl-carrier protein] O-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKS9_9FLOR)

HSP 1 Score: 319 bits (818), Expect = 1.960e-106
Identity = 143/221 (64.71%), Postives = 181/221 (81.90%), Query Frame = 0
Query:   60 CCGPGCRQSLNEAASEVTDHYDNHYFQWQTRLGREKAASRNWNEFFETKPTDTVADLGAGGGHILATLNVSRRIAVEINPVARASIHSNYPEQIETFTYPEDVPDHTVDIFFSTSAIEHFECPLTELREMTRKLRKGGRVIIGIKNEGVQYAGSVKKDNIDQHLYTWNRQLLFNLLQTAGLHVTSVDPHISKVIKTGIEWTHPDNFTTYKTFIYHWARAIK 280
            CCGPGCR  +NE+   +  HYD+ YF+WQT LGR+KA++RNW+  F    TDTVADLGAGGGHILATLNVSRRIA+E+NPVARA+IH  YP  IET+ +PE++ D ++DI +STSAIEHFECPLTELRE+ RK+R GGR++IG+KNEGVQYA ++KK++ DQH+YTWNRQLL+NLL++AG  V  VDP + +VI  G +WTHPD++TT  T+IYHWA  IK
Sbjct:   57 CCGPGCRPPINES---IAKHYDHAYFKWQTALGRQKASARNWSRVFGVHTTDTVADLGAGGGHILATLNVSRRIAIEVNPVARAAIHHEYPNLIETYRFPEELEDDSLDIVYSTSAIEHFECPLTELRELARKVRVGGRMVIGVKNEGVQYALNIKKNDTDQHMYTWNRQLLYNLLKSAGFDVQKVDPSLREVIDKGRKWTHPDSYTTLDTYIYHWAYGIK 274          
BLAST of Ggra2574.t1 vs. uniprot
Match: A0A1X6PDA8 (Methyltransf_11 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDA8_PORUM)

HSP 1 Score: 252 bits (644), Expect = 5.050e-80
Identity = 138/269 (51.30%), Postives = 171/269 (63.57%), Query Frame = 0
Query:   17 EFRLITFLLLVSLLVNGFLSLCLGLYPPSVAVSQGNRQ--NSVTHCCGPGCRQSLNEAASEVTDHYDNHYFQWQTRLGREKAASRNWNEFFETKPTDTVADLGAGGGHILATLNVSRRIAVEINPVARASIHSNYPEQ-IETFTYPEDVPDHTVDIFFSTSAIEHFECPLTELREMTRKLRKGGRVIIGIKNEGVQYAG--SVKKDNIDQHLYTWNRQLLFNLLQTAGLHVTSVDPHISKVIKTGIEWTHPDNFTTYKTFIYHWARAIK 280
            E  L+T L+LV   V G  S   G +P + ++ Q      N+   CCGPGCR  + +AAS    HYD  YFQWQT  GR KA + N+N  F+T+PTD V DLGAGGGHILATLNVSRR+A+E+NP ARAS+  NYP+  I    Y EDV D+++D+ FSTS IEH ECPLTELR    K++ GGR+I+GIKNEGVQ     +    +ID HLYTW  Q+L NLL  AG  V  VDP ++        WT  D   +YK F+YHWA A K
Sbjct:   23 EVVLVTALVLVLSTVLGKGSASRGGWPTAASLWQCAPALVNAKPACCGPGCRGDMGKAAS----HYDEKYFQWQTSQGRTKALNTNFNSLFQTRPTDVVGDLGAGGGHILATLNVSRRVAIELNPHARASMAVNYPDAAIHAVQYIEDVEDNSLDLLFSTSVIEHLECPLTELRAAAAKIKVGGRIIVGIKNEGVQVGRQWTDPAQDIDMHLYTWAPQMLANLLYAAGFQVDRVDPPVAAAESASATWTASDR-ASYKAFVYHWAYATK 286          
BLAST of Ggra2574.t1 vs. uniprot
Match: A0A0M0KAF3 (3-demethylubiquinone-9 3-o-methyltransferase (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KAF3_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 7.600e-57
Identity = 95/192 (49.48%), Postives = 125/192 (65.10%), Query Frame = 0
Query:   59 HCCGPGCRQSLNEAASEVTDHYDNHYFQWQTRLGREKAASRNWNEFFETKPTDTVADLGAGGGHILATL--NVSRRIAVEINPVARASIHSNYPEQIETFTYPEDVPDHTVDIFFSTSAIEHFECPLTELREMTRKLRKGGRVIIGIKNEGVQYAGSVKKDNIDQHLYTWNRQLLFNLLQTAGLHVTSVDPH 248
            +CCGPGCR    E+ + V  +YD+ YFQWQ + G  KA + NW +      +DTV D GAG G IL+ L  +V++ +AVE + VARA   S Y  +I+++ YPE VPD +VD+ FSTS IEH ECP+ ELRE+ RKL+ GGRV+IGIKNEGV+   +    N D HLYTWN  LL N L+ AG  +  +  H
Sbjct:   16 NCCGPGCRSQPGESGTNVEAYYDDKYFQWQRKSGILKAKTTNWRKLLNVSRSDTVLDFGAGTGEILSVLQPHVAQTVAVEFSDVARA-YESKYHPKIKSYKYPELVPDASVDLVFSTSVIEHVECPINELRELHRKLKPGGRVVIGIKNEGVELWKAWSSSNRDNHLYTWNSVLLGNTLRAAGFVIDHITYH 206          
BLAST of Ggra2574.t1 vs. uniprot
Match: A0A2D7NFG9 (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2D7NFG9_9BACT)

HSP 1 Score: 101 bits (251), Expect = 3.790e-22
Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 0
Query:   77 TDHYDNHYFQWQTRLGREKAASRNWNEFFETKPTDTVADLGAGGGHILATLNVSRRIAVEINPVARASIHSNYPEQIETFTYPEDV----PDHTVDIFFSTSAIEHFECPLTELREMTRKLRKGGRVIIGIKNEGVQYAGSVKKDNIDQHLYTWNRQLLFNLLQTAGLHVTSVDPHISK 251
            +DHYD++YF WQ  +G     + ++         DTV D G GGG++L  L   ++I +E N  A      N   +IE F  P +V     + ++D+  S +A+EH   PL EL+ +   L++GG++   +  +  ++    KK++I+ HLY+W+   L NL   AG  V  V P+I K
Sbjct:    7 SDHYDSNYFVWQKSIGLFSGKACSFKFCSSISSDDTVLDFGCGGGYLLKNLVCKKKIGIEPNYSAHEETKKN---KIEIFDSPLEVLKAYGEESIDLIISNNALEHTLDPLNELKNLFPLLKRGGKIHFVVPCDSHKFKW--KKNDINNHLYSWSPMNLGNLFTEAGYKVIKVQPYIHK 180          
BLAST of Ggra2574.t1 vs. uniprot
Match: A0A7S1YSY5 (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSY5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.440e-21
Identity = 57/184 (30.98%), Postives = 97/184 (52.72%), Query Frame = 0
Query:   66 RQSLNEAASEVTDHYDNHYFQWQTRLGREKAASRN------WNEFFETKPTDTVADLGAGGGHILATLNVSRRIAVEINPVARASIHSNYPEQIETFTYPEDVPDHT-VDIFFSTSAIEHFECPLTELREMTRKLR-KGGRVIIGIKNEGVQYAGSVKKDNIDQ--HLYTWNRQLLFNLLQTAG 239
            + +   + S+    YD  Y++WQ  L +  AA +              K  + + + G  GG+IL ++ +  +  +EINP +R      +    E F  PED+P     DI ++TS +EH +CPL ELR++  +L  + G +I+G+KN+G     + ++   D+  H+YTWN  LL N+L++AG
Sbjct:   91 KDTKTSSLSDNEQQYDAKYWEWQAVLNKFGAAYKGDIIRHLIAGLAGEKAPEKILEFGCSGGYILDSMPIKEKYGIEINPSSRQHAKETFSSINEVFVRPEDMPATLKFDIIYTTSVLEHVDCPLCELRKLQGRLHPQTGVLIVGLKNDGFDLNQNFERKQNDRNHHIYTWNALLLANMLESAG 274          
BLAST of Ggra2574.t1 vs. uniprot
Match: A0A349JJ45 (SAM-dependent methyltransferase n=2 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A349JJ45_9CYAN)

HSP 1 Score: 56.6 bits (135), Expect = 9.860e-6
Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 0
Query:   92 GREKAASRNWNEFFETKPTDTVADLGAGGGH----ILATLNVSRRIAVEINPVARASIHSNYPEQIETFTYP-------EDVPDHTVDIFFSTSAIEHFECPLTELREMTRKLRKGGRVI 200
            GRE+ ++R  N   + KPTD VAD+GAG G+    I   L   + IAV++ P   A I  N  E+      P        ++P+++VD+     A   FE P   ++ + + L+ GGRV+
Sbjct:   93 GREEKSARLVNNL-DLKPTDIVADIGAGTGYFSFRIAPLLPEGKVIAVDVQPEMLAFIKLNKQEKNIANVEPILGSIADPNLPENSVDVALLVDAYHEFEYPREMMQGIVKALKPGGRVV 211          
The following BLAST results are available for this feature:
BLAST of Ggra2574.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IKS91.960e-10664.71Malonyl-[acyl-carrier protein] O-methyltransferase... [more]
A0A1X6PDA85.050e-8051.30Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A0M0KAF37.600e-5749.483-demethylubiquinone-9 3-o-methyltransferase (Frag... [more]
A0A2D7NFG93.790e-2232.40Uncharacterized protein n=1 Tax=Candidatus Marinim... [more]
A0A7S1YSY51.440e-2130.98Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A349JJ459.860e-632.50SAM-dependent methyltransferase n=2 Tax=unclassifi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013216Methyltransferase type 11PFAMPF08241Methyltransf_11coord: 115..201
e-value: 3.1E-8
score: 34.1
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 65..258
e-value: 2.9E-20
score: 74.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..282
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 112..203
e-value: 7.4877E-6
score: 42.0319
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 78..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:808910..809856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2574.t1Ggra2574.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 808910..809856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2574.t1 ID=Ggra2574.t1|Name=Ggra2574.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=283bp
MPYLPKRLSTTFGNLREFRLITFLLLVSLLVNGFLSLCLGLYPPSVAVSQ
GNRQNSVTHCCGPGCRQSLNEAASEVTDHYDNHYFQWQTRLGREKAASRN
WNEFFETKPTDTVADLGAGGGHILATLNVSRRIAVEINPVARASIHSNYP
EQIETFTYPEDVPDHTVDIFFSTSAIEHFECPLTELREMTRKLRKGGRVI
IGIKNEGVQYAGSVKKDNIDQHLYTWNRQLLFNLLQTAGLHVTSVDPHIS
KVIKTGIEWTHPDNFTTYKTFIYHWARAIKKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013216Methyltransf_11
IPR029063SAM-dependent_MTases