Ggra2553.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2553.t2
Unique NameGgra2553.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length933
Homology
BLAST of Ggra2553.t2 vs. uniprot
Match: A0A2V3IEJ9 (Tonsoku-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ9_9FLOR)

HSP 1 Score: 1150 bits (2976), Expect = 0.000e+0
Identity = 619/942 (65.71%), Postives = 750/942 (79.62%), Query Frame = 0
Query:    1 MQRYDIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRREKAACKRLVDNNPDNLQHRLDLAIAYRRCGDVILKLDRLVDAHDNLITNKAEVIRAAHKQHRHALQIARAIDSAPASLERQAASAAIAHSALALAMETKRVSAFRHAAQCCIRAARLIDCIDPDSGGSLMVERNGMTHGLAVNFAIALSGMGEKKKAKTMLHAVVLNARRVNDMPNFLRAVANLAEEAGEEEDWSMCQFYSRQWVEMAKQAGDEPDESDALRKMAVALRETQDFRGAKEALERAIIIAATRDAADEARSFLEVIEQDMDDYEQMQRQLAAAQRSAADSEKESNFVEEAKHRLTAGNHAFTLKKWKLAADLLQRYFVLVDEFGCNTAVTDIPEPIHNSAVANVAEAMWKMKKYEHAVKWASRELAVFDGDDAGQAQAWCNLGVYLDDFGSKQKAIDALQKSMFFAEKAVQNGIFKRAQTNLELIQEELQKAGASGEALSLEKEKRV-VRSAVNTENDHVKGSPAQSTFNANRSTCHTAFHT-TEKYAP-QDATTSSKGEKSVIVISTQPAAGASK------PKSTSIESGRNFSDHL-LRSSVASKNNGDCTNHSRSHPSRGGTVTADRSSFGFKRVTDLVTEYKRVCGARPTSSARVQGRIVRAFRALSSVLIARDACDENSVAPLVLNLSHMLLSNDDMSAVFETLSKLGNECSIHLNLSFNPTITSSAYDCLNPRSYLSPSNLDCLKELNLSCSGLSGHALRILANALSEKGSLSSVSHVNISKNALGRQSRITALGVARLLLDSFRVEQVDISNNLLPNSFMTDLVDNLTRLEKNQPERRFACVRKVSFVLNNRRCPSALLDVDNPETIVACFAQLFKILSHLEVVDVRACGANSTVRRLLRSLTAENGVSPRTIVTVSEAIMEEANEDNVILDDCSMK 932
            MQRYDIAQLQRQL+NLEDHNDSEAQKLYNNLGLA+LQARRYRHALNAHRREKAACKRLV+ NP NL HRLDLAIAYRRCGDVILKLDRL+DA  NLIT+KA+VIRAAH QHRHAL+IAR IDS  A +ERQAASAA+A SALALA+ETK + AFRHAAQCCIRAARLIDCI  +    +  ++N MTHGLAVNFAIALSGMGE KKA TMLHAV LNA+RVNDM NF+RA++NLAEEA +E+DW+MCQFYS+QWV MA+QA DE DESDALRK+AVALRE  DFRGAK+AL+RAI+IAAT+DAADEAR FL+V+EQ+ D +E+MQR+LAAAQRSA ++E+++NFVEEAK  LTAGNHAF LKKWKLA +LLQRYFVLVDEFGCNTAVTD+P P+HN+AVANVAEAMWKM KYE AVKWASRELAVF+GDDAGQAQAWCNLGVYLDDFG K KA+DAL++SMFFAEKA    IF RAQTNLEL++EELQK  A+  + S   +  V V    N +     G   Q     N ST  ++ +  +  +AP  +  TS+ GEKSV+++STQP+ G SK        S  +   R  S H   RSS A+KN+ +  N SRSHPSRG TVTADRSS GFK+V D+V+EYK++C  R    + +Q RIV A ++LSS LIARDACDE S+ P VLNLS MLL+++D+S +FE LSK+G + ++HLNLSFNPT+TS+AYDCLNPRSY SP NL C+KELNLSCSGLSG+ALRILA+ALS+ GSLS V+ VN+SKNALGRQ ++TA  VARLLL++ +V+++D++ NLLPN+FM +L+DNL RL  +  +   + +RKVSF LNNR  P+A+LD++  +  V  F  LF IL  LEVVDVRACGA+ T+RR+LR L+       RT+V+VS+ I ++++    +LDD  +K
Sbjct:    1 MQRYDIAQLQRQLDNLEDHNDSEAQKLYNNLGLAHLQARRYRHALNAHRREKAACKRLVNANPHNLNHRLDLAIAYRRCGDVILKLDRLIDADRNLITDKADVIRAAHVQHRHALKIARVIDSPYARVERQAASAALAQSALALALETKSIPAFRHAAQCCIRAARLIDCIRNEDIRVVDPDKNDMTHGLAVNFAIALSGMGEMKKANTMLHAVALNAKRVNDMQNFVRALSNLAEEASDEQDWNMCQFYSQQWVHMARQARDEADESDALRKLAVALRENHDFRGAKQALQRAILIAATKDAADEARRFLDVVEQETDQFERMQRELAAAQRSAVEAEQDANFVEEAKCTLTAGNHAFALKKWKLAVELLQRYFVLVDEFGCNTAVTDVPYPVHNTAVANVAEAMWKMNKYEEAVKWASRELAVFEGDDAGQAQAWCNLGVYLDDFGKKHKAMDALKQSMFFAEKAGDQEIFNRAQTNLELVEEELQKTNANPPSTSQAPQSHVFVIDPENQDTTANSGPIPQVASTLNPSTILSSVNVASSSHAPGNNGATSNGGEKSVMMVSTQPSVGISKRTNGFTATSQDVSLPRTRSFHADFRSSAATKNSYEDANRSRSHPSRGATVTADRSSIGFKKVVDVVSEYKKICTGRQHGLSHLQPRIVTALQSLSSALIARDACDETSMIPAVLNLSRMLLNDNDVSIIFEILSKIGEDYAVHLNLSFNPTVTSTAYDCLNPRSYFSPCNLHCVKELNLSCSGLSGNALRILADALSKTGSLSCVTIVNVSKNALGRQWKVTAFAVARLLLNASKVQELDLALNLLPNTFMKELLDNLQRLNTSSQQGTDSPIRKVSFNLNNRCFPTAMLDMEYADDAVRVFKSLFTILPGLEVVDVRACGASRTLRRMLRELSTLQDRCSRTVVSVSDLIEDDSDPLRPMLDDWGIK 942          
The following BLAST results are available for this feature:
BLAST of Ggra2553.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEJ90.000e+065.71Tonsoku-like protein n=1 Tax=Gracilariopsis chorda... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..341
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableCOILSCoilCoilcoord: 473..493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..616
NoneNo IPR availablePANTHERPTHR10098RAPSYN-RELATEDcoord: 17..493
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 677..895
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 434..467
e-value: 2.5
score: 17.1
coord: 268..301
e-value: 16.0
score: 13.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..300
e-value: 3.6E-10
score: 41.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 328..488
e-value: 7.6E-9
score: 37.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 346..489
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 185..347
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 657..920
e-value: 1.7E-9
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:746047..748845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2553.t2Ggra2553.t2Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 746047..748845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2553.t2 ID=Ggra2553.t2|Name=Ggra2553.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=933bp
MQRYDIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRR
EKAACKRLVDNNPDNLQHRLDLAIAYRRCGDVILKLDRLVDAHDNLITNK
AEVIRAAHKQHRHALQIARAIDSAPASLERQAASAAIAHSALALAMETKR
VSAFRHAAQCCIRAARLIDCIDPDSGGSLMVERNGMTHGLAVNFAIALSG
MGEKKKAKTMLHAVVLNARRVNDMPNFLRAVANLAEEAGEEEDWSMCQFY
SRQWVEMAKQAGDEPDESDALRKMAVALRETQDFRGAKEALERAIIIAAT
RDAADEARSFLEVIEQDMDDYEQMQRQLAAAQRSAADSEKESNFVEEAKH
RLTAGNHAFTLKKWKLAADLLQRYFVLVDEFGCNTAVTDIPEPIHNSAVA
NVAEAMWKMKKYEHAVKWASRELAVFDGDDAGQAQAWCNLGVYLDDFGSK
QKAIDALQKSMFFAEKAVQNGIFKRAQTNLELIQEELQKAGASGEALSLE
KEKRVVRSAVNTENDHVKGSPAQSTFNANRSTCHTAFHTTEKYAPQDATT
SSKGEKSVIVISTQPAAGASKPKSTSIESGRNFSDHLLRSSVASKNNGDC
TNHSRSHPSRGGTVTADRSSFGFKRVTDLVTEYKRVCGARPTSSARVQGR
IVRAFRALSSVLIARDACDENSVAPLVLNLSHMLLSNDDMSAVFETLSKL
GNECSIHLNLSFNPTITSSAYDCLNPRSYLSPSNLDCLKELNLSCSGLSG
HALRILANALSEKGSLSSVSHVNISKNALGRQSRITALGVARLLLDSFRV
EQVDISNNLLPNSFMTDLVDNLTRLEKNQPERRFACVRKVSFVLNNRRCP
SALLDVDNPETIVACFAQLFKILSHLEVVDVRACGANSTVRRLLRSLTAE
NGVSPRTIVTVSEAIMEEANEDNVILDDCSMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR032675LRR_dom_sf