Ggra2494.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2494.t1
Unique NameGgra2494.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length832
Homology
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A2V3IYB7 (Replication factor C subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB7_9FLOR)

HSP 1 Score: 1078 bits (2787), Expect = 0.000e+0
Identity = 567/739 (76.73%), Postives = 614/739 (83.09%), Query Frame = 0
Query:   10 KKRNSSGFGGPQSTAAEPQKKKARWQPRTDNPPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSV--SSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHARSTVTGCRVGVKTADTVASARRSSIPAGG 746
            KKR+S  FGG   TAA+P  KK RW PRTD+PPNRGNKPLPVG+PNCL+GKVFVITGVLDSLLREEC DLCKEYGARVVSAVSGKVTH IVGTE GASK+ K+  K IP IDED LF MI ASRP++P           P ++V +PV A          E A   XXXXXXXXXX                         +++   T     S++AKPS   SS+ LWVDKYKPT KSELVANQKA+RDLS WL+ WK KFLY DGHS+KLKDRSD+DYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQ LGETVMVANTMSKYF +S K KKKS Y  GQ LIMDEVDGMSGGDRGGSQELIR+IKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQ T RL+ IVR+EGF  IQDQTL KLAEGCNGDIRQMINLLQAWRT SPSLSFGDVK RL+VEGKTVIQKS+FELA+ FF PGIDGSSNSLIARTDSYFTDADLIPLFIQENY  TMAA+QSL ALADAAESISEGDLCNAL+RGQQRWDLMPT AVLS+LRPGTL+AGGI  Q+MFPSLLGNISKGNKW RIVQGLEMKIKA KTSTGSTRSFRLDYIP+LT CLATPLI+SGE GIDEVTERLD YY++RDPDWIDILECGVY KGRSP+EN+R  VK++FTR+YNAGTHARSTVTGCRVGVKTADT ASA++S++  GG
Sbjct:    3 KKRSSGAFGGRDDTAAQPAPKKPRWVPRTDDPPNRGNKPLPVGAPNCLSGKVFVITGVLDSLLREECTDLCKEYGARVVSAVSGKVTHAIVGTEPGASKMAKVKAKSIPSIDEDTLFDMIRASRPQQPH----------PMSVVDQPVQA----------EPAAXXXXXXXXXXXX------------------------VKSSSFAT----SSKRAKPSAATSSSALWVDKYKPTTKSELVANQKAVRDLSAWLAGWKRKFLYGDGHSRKLKDRSDTDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQNLGETVMVANTMSKYFRISGKSKKKSTYPQGQALIMDEVDGMSGGDRGGSQELIRMIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQVTSRLVDIVRKEGFRAIQDQTLVKLAEGCNGDIRQMINLLQAWRTTSPSLSFGDVKKRLEVEGKTVIQKSVFELARGFFSPGIDGSSNSLIARTDSYFTDADLIPLFIQENYLQTMAASQSLSALADAAESISEGDLCNALVRGQQRWDLMPTGAVLSALRPGTLVAGGISGQLMFPSLLGNISKGNKWKRIVQGLEMKIKAVKTSTGSTRSFRLDYIPALTTCLATPLIQSGEVGIDEVTERLDCYYLERDPDWIDILECGVYGKGRSPMENIRGGVKSSFTRSYNAGTHARSTVTGCRVGVKTADTAASAKKSTVVGGG 693          
BLAST of Ggra2494.t1 vs. uniprot
Match: R7Q8T7 (Replication factor C subunit 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8T7_CHOCR)

HSP 1 Score: 894 bits (2310), Expect = 2.350e-314
Identity = 473/761 (62.16%), Postives = 548/761 (72.01%), Query Frame = 0
Query:   14 SSGFGGP---QSTAAEPQKKKARWQPRTDNPPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSA-------QLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSH---------YRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHARSTVTGCRVGVKTADTVASARRSSIPAGGEDVAVVDDD 755
            S GFGG    Q  AAEP  KK +W PR D PPNRGNK LP+G+ NCL GKVFVITG+LDSLLREECADLCKEYGARVV +VSGKVTHGIVGT+ G SK+ KL     P I EDELFAMI+ + P    +     ++ +   +          ++K P+                                       SK R A +  R     ++A P+           QLWVDKYKP+  S+LVAN KAIRDL  WL  WK KFLY DGH  K K R D DYAA LL GPPGIGKTTAAHIVC+E GFEPHE+NASDVRNKGGV ML ETVMVANTM KYF+++ KK +KS          +  GQVLIMDEVDGMSGGDRGGSQELI++IK SKVPIICIANDDSS NMRSL+NNCFK+RFR+PM  Q T RL+ I RREGF  +QDQT+AKLAEGCNGDIRQMINLLQ WRT+S SLSFG VK RL VEGKTVIQKSIFELAK FF PGIDGS NSL +RTD+YF D+DL+PLFIQENY +T AA  SLE LA AAESISEGDLCN+L+R +QRW+LMP AA++S++RPG+++AGG+  Q  FPS LGN+SKGNKW RIVQGLEMK+KAA T++ S R+FRLDYIP+LT CLATPLIR G  GIDEV ERLDSY ++RDPDW++IL+ GVYAKGRSP+EN+   VKT FTRAYN+  H RSTVTG R+GVK A   A+  +  +  G  DVAVVD+D
Sbjct:  147 SVGFGGATEVQGAAAEPAAKKRKWVPRQDAPPNRGNKDLPIGARNCLTGKVFVITGILDSLLREECADLCKEYGARVVGSVSGKVTHGIVGTDPGDSKMKKLKANRCPIISEDELFAMISKTLPPSKEKKDVEMEDDEEDVIE---------VEKAPV---------------------------------------SKRRNASTAARSPKPRKEAPPTGGRINGEQHLNQLWVDKYKPSSSSDLVANAKAIRDLRAWLESWKGKFLYGDGHKWKPKARGDMDYAAVLLAGPPGIGKTTAAHIVCKELGFEPHEYNASDVRNKGGVHMLAETVMVANTMFKYFAIAPKKGEKSSKGKSGRSTSFPEGQVLIMDEVDGMSGGDRGGSQELIKVIKTSKVPIICIANDDSSPNMRSLSNNCFKLRFRRPMVNQVTKRLMQIARREGFRQLQDQTVAKLAEGCNGDIRQMINLLQTWRTSSTSLSFGQVKERLVVEGKTVIQKSIFELAKGFFMPGIDGSHNSLFSRTDNYFADSDLMPLFIQENYVNTGAAESSLEKLALAAESISEGDLCNSLVRREQRWELMPAAAIMSAIRPGSIMAGGLRQQPQFPSFLGNMSKGNKWKRIVQGLEMKVKAAPTTSASVRAFRLDYIPALTTCLATPLIRDGAGGIDEVVERLDSYCLERDPDWLEILDAGVYAKGRSPMENIPGSVKTGFTRAYNSREHRRSTVTGMRIGVKQA-VDANMTKKRVDEG--DVAVVDED 856          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A1X6P0T4 (Replication factor C subunit 1 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0T4_PORUM)

HSP 1 Score: 559 bits (1440), Expect = 3.330e-183
Identity = 343/770 (44.55%), Postives = 448/770 (58.18%), Query Frame = 0
Query:   27 PQKKKARWQP--RTDNPPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAE-----KGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYS---------DGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNK--------------KKKKSH-----------YRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHARSTVTGCRVGVKTADTVASARRSSIPAGGEDVAVVDDD 755
            P  KKAR  P   +  PP  G K +PVG+PNCL G VF +TGVL+SL R+  ADLCK+YGARVVSA+S  VTH ++G E GASKL KL E     K    IDED LF ++       PR   A+            P        KKP   +A V XXXXXXX                                   R  G ++       + +LWVDKY+P   S+LVAN K  +DL  WL  WKS               G  +     +DS+  AALL GPPGIGKT+ AH++ R  G+EPHE NASD RNK  +      +++++++S +F    K              +K K             Y +GQVLIMDEVDGMSGGDRGG QELI++I  ++VPIICI NDD +  MR+LAN+CFK++FR+PM  QT  RLL I  REG+  I  QT  KLAE C+GDIR MINLLQ WR++S +LSF DVK R++ EGKT  ++S FEL +SFF    + S  S+  R D +F DADL+PLF+QENYP + AA      LA AA+SISEGDL N +IR +QRWDLMP + +LS++RPG ++AGG+  +  FPS LG  S   K  R+V+ LEM+ KA    + S+R+FRLDY+P+LT+ +ATP++  G AGI      LD+Y++ RD D   +   G+YAKG +PL+ V + VK   TR YN  +HA+STV+G   GVK     A+A+ + + A   +V  V+DD
Sbjct:  172 PPAKKARAGPPWASGAPPRAGEKEVPVGAPNCLKGLVFCLTGVLESLHRDVAADLCKQYGARVVSALSRNVTHALIGEEPGASKLKKLDELKAAGKAPTVIDEDGLFELLRTREGDGPRPGAAA------------PXXXXXXXXKKP---DAPVVXXXXXXXP--------------------------------APRPVGSAD-------NTELWVDKYRPKEMSDLVANPKIAKDLEAWLLGWKSARAAERLARAARGGGGPKRGAPKAADSEAKAALLAGPPGIGKTSMAHVIARACGYEPHEMNASDTRNKAAIAGSVADIVLSSSISSFFPFKPKADAAAPPPRTKGGSRKGKGRAAAPPAAPVNAYPNGQVLIMDEVDGMSGGDRGGMQELIKVIASTQVPIICICNDDQAQKMRTLANHCFKLKFRRPMVSQTRARLLQIAMREGYRHIDPQTADKLAESCHGDIRAMINLLQTWRSSSETLSFTDVKERMKTEGKTRTEQSPFELYRSFFD---NRSGRSVNDRLDDFFMDADLMPLFVQENYPSSTAAIGRPHLLAAAADSISEGDLLNQMIRSEQRWDLMPASGLLSAVRPGAMVAGGMSGRANFPSWLGKFSTERKNVRLVKELEMRCKAGTRCSQSSRAFRLDYVPALTSAVATPMVSLGAAGIGPAVAVLDAYFLNRD-DVEALSGLGIYAKGTAPLDAVDSKVKATLTRTYNTSSHAQSTVSGAHFGVKG---TAAAKPTPVSATAAEVVDVEDD 880          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A7S1XFP5 (Replication factor C subunit 1 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFP5_9RHOD)

HSP 1 Score: 510 bits (1313), Expect = 3.360e-165
Identity = 332/760 (43.68%), Postives = 436/760 (57.37%), Query Frame = 0
Query:   35 QPRTDNPPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKS-KFLYSDGHSKKLKDRS-----DSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGV-QMLGETVMVANTMSKYFSVSNKKKKKSHYR--HGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHA--RSTVTGCRVGVKTADTVASARRSSIPAGGEDVAVVDDDLALEVSDEQEESEDDDLVLDFSKKQSKK 783
            QPR++ PPN+G KP+P G+P+CL+GK FVI+GVLDSL R+ECADLCK YGA+VVSAVS K +H I+G+EAG SKL K  + GIP IDEDELF MI  S P K      SQ+++      KEP                                               XXXX K  +A    RK    E A   V   QLWV+KY+P   SEL  N   I D   WLS WK+ + L       + +  +     D    AALL GPPGIGKTT A  +CRE GFEPHEFNASD RNK  V  +LGE  +  N   + + V N +  K+      GQVL+MDEVDGMS GDRGG QELI+LI+ ++VPI+CIANDDSS  +RSL N+C K++FR+P   Q   R+L I + EG   I  QT  ++AEGC GD+RQ +N LQAWR+    +++ +V +R + EGKTV  KSIF+L +SFF    D   +SL  R D +F DADL PLF+QENY         L  LA AA+SISEGDL + L+R  QRWDLMP  A+LS L PG++ +G   A+  FP+ LG  S   K  R+V+ L+M+ K + +  G+  S RLDYIP+L    ++PLI   + GI++V   LD+YY+ R+ D+  + +  V      P +     VKTAFTR +N+ +H    +TVT  +   + ADT       S+  GG+D+  V         DE+ ES+D++  L   K +  K
Sbjct:  157 QPRSE-PPNKGMKPVPTGAPDCLSGKQFVISGVLDSLERDECADLCKRYGAKVVSAVSSKCSHLILGSEAGESKLAKAKQLGIPCIDEDELFKMIRESNPGK-NCISTSQKDNPNLESPKEP----------------------------------------------EXXXXXKLTSA----RKDVKGESAPRIVGDGQLWVEKYRPRKVSELCGNPGLITDFRRWLSGWKTYRDLEQSAEGARKRKAAPTTGEDMKMRAALLTGPPGIGKTTLAITMCRELGFEPHEFNASDTRNKKAVADLLGELTL--NQAMEMYCVVNPQSSKAPLASPEGQVLVMDEVDGMSSGDRGGIQELIKLIRSTRVPIVCIANDDSSQKIRSLQNHCLKLKFRRPTAAQCRKRILDIAQAEGM-TIDPQTAERIAEGCRGDLRQTLNCLQAWRSTGTQVTYQNVVDRFKDEGKTVESKSIFDLFRSFF----DSRGSSLSDRMDDFFMDADLNPLFVQENYIQCRGVTD-LARLARAADSISEGDLASNLVRAHQRWDLMPVQALLSCLVPGSI-SGFFAARPNFPAWLGKNSSTRKNIRLVRELDMRGKLSLS--GNMSSIRLDYIPALQTVTSSPLILREQDGIEDVIATLDAYYLTRE-DFDTVTDLLVQKPPPIPSK-----VKTAFTRQFNSLSHPLNAATVTHGKSASRPADT--GGEEGSLGGGGDDIVDVGKASTEPEVDEEGESKDEEQSLVVKKSKKSK 845          
BLAST of Ggra2494.t1 vs. uniprot
Match: M2X3U2 (Replication factor C subunit 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X3U2_GALSU)

HSP 1 Score: 478 bits (1230), Expect = 4.800e-154
Identity = 292/700 (41.71%), Postives = 392/700 (56.00%), Query Frame = 0
Query:   31 KARWQPRTDNPPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAK----RTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHARSTVTGCRV 726
            K  W+  T +PPN+G K +P GSP  L G  F ITGVLDSL REEC DL +  G RVVS+ S  V   +VG E G SK+ K+A   I  IDED LF +I A                   N+ K  V+ K     T +KKP  +N                                         A+S T               ++LW  KY P   SEL AN  AI+ L  WL  WK+  L  +G     K++  S   A LL GPPGIGKTTAA +V +E G+ P EFNASD RN+  V     +V+   T++++     K K  S      V+IMDEVDGMS GDRGG QELI+LIKK+ VPI+CI NDDSS  +RSLAN C K+++R+P+  Q   RLL I ++EGF  +  QTL K+ E C+GD+RQ++NLLQ+WR++S +L++ DV  R++ +GKT  + SIFEL KS F PG       L  R D+YF D DL+PL + ENY  +  A+  L+ L +A+ SI+EGD+ N LIR QQ W+LMP  A+ S + PG LL G  G  I FPS LG  S  +K  R+   L+M++  +   +GS  +F L+Y+P L + L+ PL+ S + G+ +V ERLD+YY+ +D DW  ++   +  KG + L+ + T  KTAFTR YN+  H  ST +  RV
Sbjct:   74 KGPWK-HTISPPNKGKKAVPTGSPESLQGLTFCITGVLDSLEREECTDLIRSLGGRVVSSPSKSVNFAVVGLEPGESKMAKIASLKIQVIDEDGLFDLIRARST---------------ANIWKGQVETKTKLEETKQKKPTIDN---------------------------------------NIAQSAT--------------CSELWTYKYAPCDLSELCANPGAIKSLKEWLVNWKAASLSQEGS----KNKGKSSPKAVLLSGPPGIGKTTAALLVSKELGYFPMEFNASDTRNRAIVSSTVGSVINNQTLNQF----GKDKTTS-----SVIIMDEVDGMSAGDRGGIQELIQLIKKTSVPIVCICNDDSSVKVRSLANYCLKLKWRRPLASQLRSRLLEICKKEGFENVDTQTLEKIVESCHGDMRQILNLLQSWRSHSRNLTYSDVLERMKQDGKTYEEMSIFELVKSLFSPG-----EWLSRRLDNYFMDPDLMPLMVAENYIISREASD-LKKLVEASTSIAEGDIFNDLIRRQQAWNLMPVQALFSGIYPGQLLQGPFGDMIHFPSWLGKNSTRSKNKRLTMELQMRM--SNNISGSFHAFLLEYLPCLRSILSAPLVNSKD-GVSDVIERLDAYYLSKD-DWDTLMSLSLEQKGHTELDKIPTATKTAFTREYNSRDHRVSTASAIRV 681          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A5J4YWI6 (Replication factor C subunit 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWI6_PORPP)

HSP 1 Score: 414 bits (1063), Expect = 4.750e-128
Identity = 272/690 (39.42%), Postives = 367/690 (53.19%), Query Frame = 0
Query:   22 STAAEPQKKKARWQPRTDNPPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKL-AEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLV-GPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLT-ACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFT 708
            S+ + P     +W+     PP +G   +P G+PNCLAGK FV TGVL S  RE+  DLCK +G RVVSA+SG+VTH ++G +   SK  +   +     IDE+E   MI  S P  P    AS Q    T  V +              E+  V                                        + TR S  S  + P     QLWV+KY+PT  SEL AN    +    ++  W+ +F      +K  K  S+     ALL  GPPG GKTT AHI+C+E G E  EFNAS+VRNK  V      +    ++ K+ + S          +G V+IMDEVDGMS GDRGGSQELI+LIK +KVPIICIANDDSS  +R+LA  C K++FR+PM  Q   RL  I  +EGF  IQ  TL KLAE C GD+RQMIN LQ+WR ++ SLSF DVK R++  GK+ I   IF++   +F  G     +S+  R D+YF D DL+PLF+  NY +    +  ++A   AA+S+SE DL + +IRG+Q W L+P  AV+SS+RP T +  G G    FP+ LG +S  NK  R+++ L M +   +T  GS R  RL+Y+P L   C      RSG A +D V + L  YY+ +D    D+L   +  +G   L+++    K   T
Sbjct:  149 SSGSRPATNGPKWE--RPPPPFKGQTQMPTGAPNCLAGKTFVFTGVLPSFEREDAVDLCKMHGGRVVSAMSGRVTHLVLGADGSESKEKQARTQAATTVIDENEFLRMIRDS-PSVP--VSASPQPRSKTVAVNK-------------SEHGRV----------------------------------------ASTRASRGSSASAPG---EQLWVEKYRPTRMSELCANPSLAQQAYQFIKTWRERFSSKTVITKGKKLSSNGPKERALLFSGPPGTGKTTLAHILCKELGMEAIEFNASEVRNKAAVHDRVGLLTSNASIGKFVNGSTSAA------NGHVIIMDEVDGMSSGDRGGSQELIQLIKTTKVPIICIANDDSSPKIRTLAGYCLKLKFRRPMASQVRGRLQLIAEQEGFQSIQVTTLDKLAETCQGDLRQMINCLQSWRVSADSLSFTDVKQRMESGGKSNIDMGIFDVYMRYFS-GNPAQQHSIADRVDAYFMDMDLVPLFVHHNYLN--GRDGDMDAFVCAADSLSESDLLSQMIRGEQNWSLLPAHAVMSSVRP-TSIYQGFGRP-EFPAFLGKLSSANKNIRLMRELNMHM-TPQTGAGSWRETRLEYVPHLAHRCGHMIRGRSGLAHVDAVVDSLTDYYLSKDD--FDML-FDITLEGNKLLQSIEAGTKKQLT 762          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A7S3A9A0 (Hypothetical protein (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9A0_9RHOD)

HSP 1 Score: 399 bits (1025), Expect = 1.820e-125
Identity = 218/491 (44.40%), Postives = 298/491 (60.69%), Query Frame = 0
Query:  231 SSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHARSTV 721
            SS  LWVDKYKP   S+L AN K   DL  WL  W+S  L+S     KL+   +    A LL GPPG+GKT+ AH  C+EAG E  EFNASD R+K  V  +  ++ V   + +YF + +        + GQV+IMDEVDGMS GDRGG QELI +IK ++VPIICIANDD    +RSLAN+C K++FR+PM  Q   RL +I  REGF  +  + L ++AE C+GDIRQMIN+LQ+W+    S+S  + K  L  EGK   Q+ IF+L K FF+   D     +  R D YF D DL+PL +QENY H  AA + ++ LA A + +S  D+ N  +R   RWDLMPT A+LSS+ PG++LA  +  +  FPS LG +S   K  R+ Q ++M IK    +    +   LDY P L + L+ P+IR+G+ G+  V + LD YY+  + DW  IL+     +  +P +++ + VK+ FTR Y +G H  STV
Sbjct:  127 SSEALWVDKYKPETISDLCANPKHASDLVKWLKNWRSIHLHSGPRKGKLQPGQEK---AVLLAGPPGVGKTSLAHAACKEAGLEAQEFNASDTRSKKSVASIIGSLAVNEAIGQYFRLGDSPSAPR--KDGQVVIMDEVDGMSAGDRGGVQELISIIKSTRVPIICIANDDGHPKVRSLANHCLKLKFRRPMVSQVRRRLKYICDREGFRNMSPEVLDEVAEACHGDIRQMINMLQSWQARKQSVSQAEAKGYLSSEGKGFQQQPIFDLFKVFFEKNAD-----IYQRLDKYFMDPDLVPLMVQENYVHFSAA-EDIDKLAKATDLMSMADIGNKQLRESSRWDLMPTIALLSSVYPGSILASHLMGRPNFPSWLGKMSSERKSVRLAQEIDMHIKTRVNT--DWKLLLLDYAPCLRSHLSLPMIRNGKEGVQTVIDLLDEYYLS-NVDWETILDLTSVQQRSNPKDSIPSAVKSTFTRTYQSGDHVSSTV 603          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A7S1TIB9 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIB9_9RHOD)

HSP 1 Score: 387 bits (995), Expect = 7.090e-122
Identity = 242/554 (43.68%), Postives = 327/554 (59.03%), Query Frame = 0
Query:  241 KPTCKSELVANQKAIRDLSNWLSIWKS-KFLYSDGHSKKLKDRS-----DSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGV-QMLGETVMVANTMSKYFSVSNKKKKKSHYR--HGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTHA--RSTVTGCRVGVKTADTVASARRSSIPAGGEDVAVVDDDLALEVSDEQEESEDDDLVLDFSKKQSKK 783
            +P   SEL  N   I D   WLS WK+ + L       + +  +     D    AALL GPPGIGKTT A  +CRE GFEPHEFNASD RNK  V  +LGE  +  N   + + V N +  K+      GQVL+MDEVDGMS GDRGG QELI+LI+ ++VPI+CIANDDSS  +RSL N+C K++FR+P   Q   R+L I + EG   I  QT  ++AEGC GD+RQ +N LQAWR+    +++ +V +R + EGKTV  KSIF+L +SFF    D   +SL  R D +F DADL PLF+QENY         L  LA AA+SISEGDL + L+R  QRWDLMP  A+LS L PG++ +G   A+  FP+ LG  S   K  R+V+ L+M+ K + +  G+  S RLDYIP+L    ++PLI   + GI++V   LD+YY+ R+ D+  + +  V      P +     VKTAFTR +N+ +H    +TVT  +   + ADT       S+  GG+D+  V         DE+ ES+D++  L   K +  K
Sbjct:    6 RPRKVSELCGNPGLITDFRRWLSGWKTYRDLEQSAEGARKRKAAPTTGEDMKMRAALLTGPPGIGKTTLAITMCRELGFEPHEFNASDTRNKKAVADLLGELTL--NQAMEMYCVVNPQSSKAPLASPEGQVLVMDEVDGMSSGDRGGIQELIKLIRSTRVPIVCIANDDSSQKIRSLQNHCLKLKFRRPTAAQCRKRILDIAQAEGM-TIDPQTAERIAEGCRGDLRQTLNCLQAWRSTGTQVTYQNVVDRFKDEGKTVESKSIFDLFRSFF----DSRGSSLSDRMDDFFMDADLNPLFVQENYIQCRGVTD-LARLARAADSISEGDLASNLVRAHQRWDLMPVQALLSCLVPGSI-SGFFAARPNFPAWLGKNSSTRKNIRLVRELDMRGKLSLS--GNMSSIRLDYIPALQTVTSSPLILREQDGIEDVIATLDAYYLTRE-DFDTVTDLLVQKPPPIPSK-----VKTAFTRQFNSLSHPLNAATVTHGKSASRPADT--GGEEGSLGGGGDDIVDVGKASTEPEVDEEGESKDEEQSLVVKKSKKSK 540          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A6A7G4U4 (Replication factor C subunit 1 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G4U4_9CRUS)

HSP 1 Score: 403 bits (1036), Expect = 1.100e-119
Identity = 261/694 (37.61%), Postives = 364/694 (52.45%), Query Frame = 0
Query:   31 KARWQPRTDN--PPNRGNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTN--SPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLI-ARTDSYFTDADLIPLFIQENYPHTMAAN---QSLEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVRTPVKTAFTRAYNAGTH 716
            K +W P      P   G   +P G+PNCL+G  FVITGVLDSL RE+ ADL KEYG  V SAVSG   + +VG+E G SKL K  +K +  IDE  LF +I   + +KP +   S+                                                               +K  + K    KS  S  + P ++   LWV+KY+P   S+L+ N   ++ L+++L  W      + G SK+          A L+ GPPGIGKTTA HIV ++  +E  EFNASD R+K  +Q   E  +  ++++ ++   ++ KKKS      V++MDEVDGM  GDRGG  ELI++I K+K+PIICI ND  S  +RSL   C  +RFR+P  +Q TPRLL I R E   +   QT++K+AE    DIRQM+NLLQ W+TN  + ++SF  V  +L   GK         + K F  P         I A  D+YF D  L+PL +QENY HT       ++L+ +A+AAE IS GDL +  IR QQ + LMP  AVLSSL PG L+AGG+G Q+ FPS LG  S   K  R++  L   +  A +  GS  S  +DY+P++   +  PLI +G+ GI++V E +  Y + R+ DW  +   GV    R  ++ +  P+++AFTR YN   H
Sbjct:  705 KRKWYPGMQRAAPSRAGMVEIPKGAPNCLSGLRFVITGVLDSLEREQAADLIKEYGGAVTSAVSGMTAYLVVGSEPGQSKLAKAKDKQVTIIDEAGLFKLIREEKEKKPSKQSKSR---------------------------------------------------------------AKQISKKIAAVKSHPSASSNPKLTKNMLWVEKYRPFKTSDLIGNDANVKRLAHFLKSWSPN---ARGDSKR----------ACLISGPPGIGKTTAIHIVAKDLNWEILEFNASDTRSKKSLQNQLEYAVGFHSITSFYQPKSQPKKKSISLR-TVIVMDEVDGMGAGDRGGMAELIKIIHKTKIPIICICNDRQSQKVRSLVKYCVDLRFRRPTVQQVTPRLLGIARHENLPM-DLQTISKVAESVQCDIRQMLNLLQLWKTNCNNENMSFSGVSQKLSSSGKDFNIGLWDAVPKLFRSPRTPKERERFIFAGIDTYFVDLSLVPLMVQENYVHTRMNKPILETLDCIAEAAEFISSGDLIDRGIRSQQNYSLMPIHAVLSSLAPGYLVAGGVG-QLRFPSWLGRRSNRTKNYRLLSELRSHMNLAVS--GSLESCGMDYVPAIRTRVTRPLITAGKDGIEDVIEVMKQYNLSRE-DWDTLTSLGVM---RDQVK-IAAPIRSAFTRRYNQTAH 1312          
BLAST of Ggra2494.t1 vs. uniprot
Match: A0A137NYB2 (Replication factor C subunit 1 n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NYB2_CONC2)

HSP 1 Score: 380 bits (975), Expect = 3.430e-116
Identity = 263/761 (34.56%), Postives = 386/761 (50.72%), Query Frame = 0
Query:   45 GNKPLPVGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIVGTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQ--------PTNLVKEPVDAKRTIKKKPLDENATVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVANQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGKTTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSNKKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIANDDSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKLAEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELAKSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENY----PHTMAANQS--------LEALADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIMFPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACLATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPL-ENVRTPVKTAFTRAYNAGTHARSTVTGCRVGVKTADTVASARRSSIPAGGEDVAVVDDDLALEVSDEQEESEDDDLVLDFSKKQSKKG 784
            G+K +P G P CL GK FV+TG+  S+ RE+  DL K +G RV SAVSGK +  +VG E G +K+ K  +   P+IDED LF MI ++         AS             P   VK  V ++ ++K   L++   +T                                     A++ +    DS K+KP+   +++WVDKYKP   SE+V N   ++D+  +L  +     YS   ++           A L+ GPPGIGKTTAAH+ C+E G++  EFNASDVRNK  +Q    T    ++++ +F V NKK +         LI+DE+DGMSGGDRGG QE+I++IK +KVPIICIAND  ++ +RSLAN C  ++F +P +     R+ HI  +E    +    + KL      DIRQ+INLL  W+ +  SLS+ D  N    E +       F++ + +F   +  +SN++  R D YF D  +IPL +QENY    P   +++++        LE L+ AA+SISE D+ +  I  QQ W LMP  ++ S + P   + GG+   I F   LG  S   K  RI+Q L   +K  KTS G        Y+P+L   L  PL  +   GI EV E +D YY+ ++ DW ++++ G   K  S L + + + VK+AFTR YN   H  +       G  +A    S   S +    EDV V DD+   +        E +D ++   KK +K+G
Sbjct:   62 GSKEVPTGPPECLLGKTFVVTGIPPSITREDMEDLIKRHGGRVTSAVSGKTSFLVVGNEPGQTKVDKAKKMRTPQIDEDGLFDMIRSANGANGSSEAASXXXXXXXXXXXXXPKKEVKPVVKSEPSVK---LEDKPVITP------------------------------------ARNYSWMQPDS-KSKPASKVSEMWVDKYKPESISEIVGNNTHVQDIIRFLRDFDPNQPYSSSTTR-----------AVLITGPPGIGKTTAAHLACKETGYDALEFNASDVRNKAAIQQKIGTASSNHSITSFFGVGNKKPETKRL----ALILDEIDGMSGGDRGGVQEVIKMIKTTKVPIICIANDRMNTKVRSLANYCKDLKFSRPTSASIKKRIEHIAAKENL-TLSVNVIDKLVGSTQNDIRQIINLLSTWKLSYDSLSY-DQANAFSKESQKNQTMGPFDVTQRYFNGSLY-ASNTIQDRFDYYFNDFSIIPLMVQENYINSNPRRASSSETPAQQQLKHLELLSLAADSISEADIIDRTIYTQQNWSLMPVHSLYSCVAPSYYMHGGMNGMINFAGWLGKNSTATKNKRILQELHSHMKL-KTS-GDRDQLCQQYLPTLLPMLVKPLADNQADGIPEVIELMDEYYLTKE-DWDNMIDFGSSDKLTSSLFKQIPSNVKSAFTRTYNKMEHPTAFA-----GTTSAKKSKSPASSQVKPDLEDV-VDDDEAPADEEXXXXXXELEDKLIKKVKKPAKRG 755          
The following BLAST results are available for this feature:
BLAST of Ggra2494.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYB70.000e+076.73Replication factor C subunit 1 n=1 Tax=Gracilariop... [more]
R7Q8T72.350e-31462.16Replication factor C subunit 1 n=1 Tax=Chondrus cr... [more]
A0A1X6P0T43.330e-18344.55Replication factor C subunit 1 n=1 Tax=Porphyra um... [more]
A0A7S1XFP53.360e-16543.68Replication factor C subunit 1 n=1 Tax=Compsopogon... [more]
M2X3U24.800e-15441.71Replication factor C subunit 1 n=1 Tax=Galdieria s... [more]
A0A5J4YWI64.750e-12839.42Replication factor C subunit 1 n=1 Tax=Porphyridiu... [more]
A0A7S3A9A01.820e-12544.40Hypothetical protein (Fragment) n=3 Tax=Rhodosorus... [more]
A0A7S1TIB97.090e-12243.68Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6A7G4U41.100e-11937.61Replication factor C subunit 1 (Fragment) n=2 Tax=... [more]
A0A137NYB23.430e-11634.56Replication factor C subunit 1 n=1 Tax=Conidiobolu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 286..426
e-value: 4.8E-7
score: 39.4
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 54..132
e-value: 4.0E-9
score: 46.3
IPR001357BRCT domainPFAMPF00533BRCTcoord: 54..129
e-value: 3.4E-11
score: 43.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 52..133
score: 9.8621
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 291..419
e-value: 1.3E-13
score: 51.5
IPR013725DNA replication factor RFC1, C-terminalPFAMPF08519RFC1coord: 557..712
e-value: 1.0E-38
score: 133.0
IPR012178Replication factor C subunit 1PIRSFPIRSF036578RFC1coord: 3..807
e-value: 1.3E-202
score: 673.1
NoneNo IPR availableGENE3D1.20.272.10coord: 496..601
e-value: 2.1E-26
score: 93.9
NoneNo IPR availableGENE3D1.10.8.60coord: 421..492
e-value: 2.4E-14
score: 54.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 760..831
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 21..797
NoneNo IPR availablePANTHERPTHR23389:SF6REPLICATION FACTOR C SUBUNIT 1coord: 21..797
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 421..482
e-value: 1.11241E-11
score: 58.6945
NoneNo IPR availableCDDcd00009AAAcoord: 291..421
e-value: 3.06601E-15
score: 71.7935
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 28..131
e-value: 2.2E-26
score: 93.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 53..133
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 233..420
e-value: 9.6E-49
score: 167.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 234..485
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 495..624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:489706..492201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2494.t1Ggra2494.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 489706..492201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2494.t1 ID=Ggra2494.t1|Name=Ggra2494.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=832bp
MPRKPATQTKKRNSSGFGGPQSTAAEPQKKKARWQPRTDNPPNRGNKPLP
VGSPNCLAGKVFVITGVLDSLLREECADLCKEYGARVVSAVSGKVTHGIV
GTEAGASKLTKLAEKGIPKIDEDELFAMINASRPRKPRQAHASQQNHQPT
NLVKEPVDAKRTIKKKPLDENATVTKEPVDAKRTIKKKPLDENATVTKEP
VTSTRALSKTRTAKSITRKSGDSEKAKPSVSSAQLWVDKYKPTCKSELVA
NQKAIRDLSNWLSIWKSKFLYSDGHSKKLKDRSDSDYAAALLVGPPGIGK
TTAAHIVCREAGFEPHEFNASDVRNKGGVQMLGETVMVANTMSKYFSVSN
KKKKKSHYRHGQVLIMDEVDGMSGGDRGGSQELIRLIKKSKVPIICIAND
DSSSNMRSLANNCFKIRFRKPMTKQTTPRLLHIVRREGFGVIQDQTLAKL
AEGCNGDIRQMINLLQAWRTNSPSLSFGDVKNRLQVEGKTVIQKSIFELA
KSFFQPGIDGSSNSLIARTDSYFTDADLIPLFIQENYPHTMAANQSLEAL
ADAAESISEGDLCNALIRGQQRWDLMPTAAVLSSLRPGTLLAGGIGAQIM
FPSLLGNISKGNKWNRIVQGLEMKIKAAKTSTGSTRSFRLDYIPSLTACL
ATPLIRSGEAGIDEVTERLDSYYMQRDPDWIDILECGVYAKGRSPLENVR
TPVKTAFTRAYNAGTHARSTVTGCRVGVKTADTVASARRSSIPAGGEDVA
VVDDDLALEVSDEQEESEDDDLVLDFSKKQSKKGKKGAKSKPASRTGSSK
GVRGGRGRGKATGSSRGTKGTPKGKARGRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR001357BRCT_dom
IPR003959ATPase_AAA_core
IPR013725DNA_replication_fac_RFC1_C
IPR012178RFC1
IPR036420BRCT_dom_sf
IPR027417P-loop_NTPase
IPR008921DNA_pol3_clamp-load_cplx_C