Ggra2404.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2404.t1
Unique NameGgra2404.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1781
Homology
BLAST of Ggra2404.t1 vs. uniprot
Match: A0A2V3IUM0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUM0_9FLOR)

HSP 1 Score: 209 bits (532), Expect = 1.450e-50
Identity = 436/1898 (22.97%), Postives = 707/1898 (37.25%), Query Frame = 0
Query:    1 MALRNNDLIDQVQSGDQIEVWWPADKQYYPGVIDHILSNGRYHITYLDGEKEVLRLSTELWRFRGKAADRVSRAHAAGA--RKRTKKFFPTHEPEPIIXXXXXXXXXXXXXRHKQRTHHSN---------GAVIALDGTLSLSTQQSDVEIEEVPVQPHPPSVQDHRASDVSEPIVSDIEHE--VIEEEILDRGYGGDTSSAADTSELQ---PSYARRNRSTSQNHSTHKAPKTTAVFNRSNPLDTSANSHKNVRNSYTAQSASHSAQINYSPPNSSPPALEDHPGPIISPAPLAVYEQSQPSDKTP---RHQPQSPPLKLPAAAVTRPLATGSKSTAKANSGQPIKPDMRNITPKGTTNKSDRLTQEHSAQKTSAGITTSTSSKPAPRKRAMQEPSSNAV---QH-----KRKSAKSSTASPRIRVSNTAR---------------QSSAKNVAVSKYNKGTTVNGESEKVAGTTTIGTKSHS-VTPAKANTQFTQPRKPQSSPNGPKEQSTLEPPYIPLAPAMKMSTTSNPNHSTLQGTSI-------TEKTRPSCARVGLGKKTQHNIRERQSKSPRKFVGLPTRNQSNGDPKGS----AVVRKRSSLPLKSSCLEKDAKSAPQNDNWGAGKETQKAIAPLSLGPQADISV---AQTRNNQNPTNVLTQRGVAKRSI-PHAQ---SKIVAAASQARTTSSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPPYRPINVVGQRRSLPNQFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMVASRLQPKAPSTQKMVLVDANQPVPSESRAGPQLSNPAGENACYESPKPSKRVSPKIGSRILAHTDSVLSGAMNSTSVGHSKSTVKHVAKFVVHTNSAREQIADARADFVRSGSSVPSKQFPMASAA-------LRKKARHPSPKVVSHERIPRNK-------SLPASCTLKSVRIDLSRNQSLTYENAGSSQPSLVTSEQRTGPKTPMKPTLRIGSAAPSPVYVGNVPKTSDILTSQSLRTRTAVAPQ----ERDIHLRSSKPSTDDRKTQARVPQPSTPKASGSISIQSPVSSPKDVTTPRTASFRTHCDPAPVFLFQ---------NRNSGSTQPLPSVSNKEPAPSCIPKPYAGTATRMYAAPSAPNPLAISRAAAALSERKEQQTKTVPHTPSSLQVVTNPKTSSLPDKGRNQASVLAIGKPHSA--DAVSSKXXXXXXXXPPSRT--PQPVQGDKNNGTENGQKRSAAGLDRFEGAPKRRKAVPNKEPPISLRDISGIAKP---SDSPQVT---SEASSATNRRNIVDHRTMDVAAPFRGATLQKAHGA----NEKSVVIPGAGATTLLLPGSQPQTSAPLYSAAAKTPAKLQPQGSSTSNVLASSMHLGSQRPSGIPMAK-PSVNVSTEIPFSATPRNLCDRGGPPTSVQARVGPFHGVANVQPTTRVYNAPEKMSDSEDRKR---------------------LMASALKIVDERFSTLSKRTKEEFDGLKKSIETVSRDLYQIGPKIDRVDRLYNSFAD---NILKVVDTSLEGMMSKMNQKINAEAQESLLVERRRLISSSNEITQKISLVTSTLFSTAIQDVKANVEENYRRIRNEVMHESRMFEPLGDNKVLTTALRSSACETAAVAGGSESINGIVQSRSAGNSKPRAEHGLPLGAAEYQRMSSS-PSHPPTSQIRPGQNCVNESTATGLLQQGSGSESMHTRSNDLIARCVVDWLQSGMCRKKAPKSEREIPVSQEWVNSTTLKCFNSIFCRLQRWRSVSEAETAITASLAGKAVETEWLSRYTDDACVERARAIYNKWEPQLFDFEWLTEKKVMIEIAVRINTSQKKINARKLQYPNMLSRAVCIV 1770
            M+  N+ L++Q+Q GD+I+VWW  +KQY+  V+D +L NGRYH+TY DGE+E +RL+ E WRF+G+AA RV+ AH A    RKR +    T  PE I+             +  Q T HSN                             I+ +   PH      HRASDVS+P VSD +    V++ ++L       T  A     L     + A+           H+ P      +  +P  T    H N +    A +  ++   N + P +S    +     + + AP+    Q+ PSD  P    +  QSPP       V++  A+ S  T      Q  +    +      ++K     Q  SA K+S       + KP+ R  + ++P   A    QH       K   +S  +P  +    AR               QS    + ++  NK          VA        SHS  TP   NT    P K       P+ Q T  P      PA    T S     +L+ ++I         K     + V   ++ ++N+++  ++ P     +P ++ S   P  +    AVV KRS              +  Q       K  +   A     P+   S    AQ       T++   +GVA  S  PHAQ   S  + A + A+   + T                                       G +    +Q T                                                 +A  T K    + +Q  P +S A P   +                   ++    L  T S  +        G +  + K  A+        + Q+A  R+   +  +++ +   P  SA         +  ARHPSPK+V+ ERIPRNK       + P S    +   ++   Q   Y     +Q  +  +  R+  ++  K TL  G+  P+ +Y  N    ++  T     T     P     + ++ +  S      +  Q     PS   AS S+SI+S VS P  +   +      H  P P  + +         N  +G T   P+    +P  S + K ++ T   +            S A   L++ +    +T   + ++    T+         GR  AS +A G P  +    +SS             T   QP+Q ++    +  +KRSA          +  K +  K   +S  D +    P   SD  Q T   S  S+ TN   +V  +   V    R A   KA+      N+ S       A  + L  S+  T         K  +++ P G++          L S+   G PM    S N    +               PT+      P    A+  P +  Y  P + S  + RK                      L A  L  V+  + T  ++  + F  LK+  +  SR ++++  ++D+++    SFA    ++L V  T L     K+ ++   E    +  E  ++ +     T+K++ + S L +  +Q V+    ++   I+      S   +P  +   + +A      E+A  +GG                    + G+ L   +   M+++ PS    S+  P    V+E      L++          S DLIA+CVV WLQ G CRK+APK+ERE+ V Q WV  T+LKC +++  RL  ++S +EA  ++  S     +ET+WL+R+ DD  +E+AR IYN WEP+LFDFEW TEKKV++EI  RI++++  + +  L   + L  +V  V
Sbjct:    1 MSAHNDYLMEQLQLGDEIQVWWAVEKQYFNAVVDRVLPNGRYHVTYEDGEEETMRLTAERWRFKGRAAHRVAVAHPAPLTPRKRCRNTASTTHPETIVIHDDDPPP-----KRLQTTVHSNIPHPVPRKPSTEXXXXXXXXXXXXXXXXSIQIIDHSPH----SHHRASDVSDPTVSDNDQSPVVLDHQLLHITSANPTPVAHSNKPLANTTAALAQXXXXXXXXXXAHRLP------SHPSPPPT----HPNAQPPAPANTQQNTVSSNSNTPRNSRSQSKKR---LSTNAPV----QNAPSDPAPTLANNAAQSPPNNRLNTRVSQTAASKSLPTPPCQPKQTARKKKHSANAASRSSKQTNNHQPSSASKSSPAPALKPAKKPSARNASARKPKPTATTDNQHLSLPPSSKPLAASQNAPHAKSIKRARKKSTPAANDQPLKAAQSHPPPIVLAPANKRQASVKAKASVAAKAVRRQSSHSKATPDTHNTPPNAPFKRTKKRVSPR-QLTATP-----QPAXXXXTQSASAQKSLEQSTILPHLLGYNRKGARMLSTVNNNEREENNVQQTATQLPA-TSDVPAKSTSTNPPATTDSAVAVVNKRS--------------TEGQQTTAKTDKSLRTRAAQHDSSPRVTASATPRAQPSRKGKSTSLSAAKGVANSSQQPHAQETCSTAIPATNPAKAPQTGTSEIQN----------------------------------GAKADNASQPT-------------------------------------------------EAADTNKGAPPNGSQQTPKKSAACPTKRSXXXXXXXXXXXXXXXXXRARMS--FLKSTPSAAARLTKGKRNGRNTESEKVAAE--------QTQVAQIRSPATKQQNTIVTASTPTKSACPPIARDLTQVSARHPSPKLVTSERIPRNKPPMMTLSNWPPSDLEGAQHANVPHTQPDQYRWIEPAQSRMNITYHRSPAQSDPK-TLH-GNITPN-MYSANTRYPTNAPTFLGAGTVGTQPPNAFHGQGNLPIPLSVAPVHHQPAQPVTKPPS--NASASMSIRSLVSGPSALPMLQNTPSLPH-PPPPAMIPRGLSMMSPAANGPAGKTTGAPT----DPNTSTVRKTHSLTLKPLRPMIGFAQTSRASPATGVLAQGQLPGRQTFDQSSNARLNFTD---------GRTLASPVASGIPAGSWGQQISSTKHRNSSMNTDECTGFSQPLQAEQLPDIQGVRKRSAI-------VSQPNKEIVKKRKDLSSGDFTTNCSPPERSDHSQRTLHNSAPSATTNAEAVVSTQQTVVGQFMRPALGDKANSLGQNRNKTSQRSHDQEAMAVNLRSSRRSTGDN------KISSEILPAGTTG---------LNSENRGGSPMLNVKSQNAVHSLQIDKPTHAAAALTSDPTTSSGVGNPTLPTASKVPRSSAYARPRRRSQQKGRKTPDKADSTALEIASIIAELERSLSAPFLSHVEMTWRTKFEKVAQLFGNLKEESKEQSRVIHELKVRMDKIESATESFAKLAGDVLDVQSTLLPATALKICKQYETELTSFVQAEADQIDAICKSTTKKVAEMNSDLVAAVLQKVQEGDGQD-NGIKTSAGKASGRAKP--ERPAMPSAPHRHYLESAIPSGG--------------------QMGIALRMHQNPSMNNTYPSASNNSKSSPQPFVVHEKEQPPFLRE----------SLDLIAKCVVQWLQKGECRKRAPKNEREVQVPQPWVRLTSLKCLSNVLSRLSAFKSYTEARESLNTSTKDARMETDWLTRFWDDNAIEKARNIYN-WEPRLFDFEWRTEKKVILEIVDRIHSARSNLKSTLLDPSDPLEYSVACV 1683          
The following BLAST results are available for this feature:
BLAST of Ggra2404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUM01.450e-5022.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 9..59
e-value: 8.8E-11
score: 43.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 758..777
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 989..1020
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..668
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1212..1229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1085..1229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 907..940
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 959..1020
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1143..1175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1583..1619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1092..1125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 969..988
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..590
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1182..1198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 907..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1559..1619
IPR002999Tudor domainCDDcd04508TUDORcoord: 15..57
e-value: 1.60295E-5
score: 41.8147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:145277..150619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2404.t1Ggra2404.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 145277..150619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2404.t1 ID=Ggra2404.t1|Name=Ggra2404.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1781bp
MALRNNDLIDQVQSGDQIEVWWPADKQYYPGVIDHILSNGRYHITYLDGE
KEVLRLSTELWRFRGKAADRVSRAHAAGARKRTKKFFPTHEPEPIIIDDD
DDEPPPKRARHKQRTHHSNGAVIALDGTLSLSTQQSDVEIEEVPVQPHPP
SVQDHRASDVSEPIVSDIEHEVIEEEILDRGYGGDTSSAADTSELQPSYA
RRNRSTSQNHSTHKAPKTTAVFNRSNPLDTSANSHKNVRNSYTAQSASHS
AQINYSPPNSSPPALEDHPGPIISPAPLAVYEQSQPSDKTPRHQPQSPPL
KLPAAAVTRPLATGSKSTAKANSGQPIKPDMRNITPKGTTNKSDRLTQEH
SAQKTSAGITTSTSSKPAPRKRAMQEPSSNAVQHKRKSAKSSTASPRIRV
SNTARQSSAKNVAVSKYNKGTTVNGESEKVAGTTTIGTKSHSVTPAKANT
QFTQPRKPQSSPNGPKEQSTLEPPYIPLAPAMKMSTTSNPNHSTLQGTSI
TEKTRPSCARVGLGKKTQHNIRERQSKSPRKFVGLPTRNQSNGDPKGSAV
VRKRSSLPLKSSCLEKDAKSAPQNDNWGAGKETQKAIAPLSLGPQADISV
AQTRNNQNPTNVLTQRGVAKRSIPHAQSKIVAAASQARTTSSCTTNVVSQ
KTKTKQSMSSAQSKSVTPPAQIEPPPYRPINVVGQRRSLPNQFTSSSQNM
EVATLPQIQAPSILPTNVTPQRSVLKNSQRSSQNKMVASRLQPKAPSTQK
MVLVDANQPVPSESRAGPQLSNPAGENACYESPKPSKRVSPKIGSRILAH
TDSVLSGAMNSTSVGHSKSTVKHVAKFVVHTNSAREQIADARADFVRSGS
SVPSKQFPMASAALRKKARHPSPKVVSHERIPRNKSLPASCTLKSVRIDL
SRNQSLTYENAGSSQPSLVTSEQRTGPKTPMKPTLRIGSAAPSPVYVGNV
PKTSDILTSQSLRTRTAVAPQERDIHLRSSKPSTDDRKTQARVPQPSTPK
ASGSISIQSPVSSPKDVTTPRTASFRTHCDPAPVFLFQNRNSGSTQPLPS
VSNKEPAPSCIPKPYAGTATRMYAAPSAPNPLAISRAAAALSERKEQQTK
TVPHTPSSLQVVTNPKTSSLPDKGRNQASVLAIGKPHSADAVSSKDAVSS
KDLPPSRTPQPVQGDKNNGTENGQKRSAAGLDRFEGAPKRRKAVPNKEPP
ISLRDISGIAKPSDSPQVTSEASSATNRRNIVDHRTMDVAAPFRGATLQK
AHGANEKSVVIPGAGATTLLLPGSQPQTSAPLYSAAAKTPAKLQPQGSST
SNVLASSMHLGSQRPSGIPMAKPSVNVSTEIPFSATPRNLCDRGGPPTSV
QARVGPFHGVANVQPTTRVYNAPEKMSDSEDRKRLMASALKIVDERFSTL
SKRTKEEFDGLKKSIETVSRDLYQIGPKIDRVDRLYNSFADNILKVVDTS
LEGMMSKMNQKINAEAQESLLVERRRLISSSNEITQKISLVTSTLFSTAI
QDVKANVEENYRRIRNEVMHESRMFEPLGDNKVLTTALRSSACETAAVAG
GSESINGIVQSRSAGNSKPRAEHGLPLGAAEYQRMSSSPSHPPTSQIRPG
QNCVNESTATGLLQQGSGSESMHTRSNDLIARCVVDWLQSGMCRKKAPKS
EREIPVSQEWVNSTTLKCFNSIFCRLQRWRSVSEAETAITASLAGKAVET
EWLSRYTDDACVERARAIYNKWEPQLFDFEWLTEKKVMIEIAVRINTSQK
KINARKLQYPNMLSRAVCIVLGLANAIRKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor