Ggra2397.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2397.t1
Unique NameGgra2397.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length312
Homology
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BLAST of Ggra2397.t1 vs. uniprot
Match: R7Q3Z0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Z0_CHOCR)

HSP 1 Score: 123 bits (309), Expect = 2.010e-29
Identity = 78/213 (36.62%), Postives = 114/213 (53.52%), Query Frame = 0 
Query:   16 IDYRHGKTFSLPSSSRATPDDWSSMAAYATGLIAGRYSVATALGKSPEKDPASLSEAADRLLTSREASMFLAWKKDPKSALPSPDWRRLRTSITGSPAARR-RWEQFVPALQLLYGDRDVKLSAEHCKGWADKYVDAMPLLVAARKMHRARFYARCVGSSASAKLDYL-ELLACRKLMSEIGAQRVKTSSRMKQLNKYAADKEEELLRRISKL 226
            + Y H +  SLP S R  P  WS+  + A  L+   YS++ AL + P+   +S S  A  LLT+ EA+ + AW++DP+  +P  DW++LRTS T + +A++ RW     AL  LY  ++  L  E+CK W +KY D M LLVA RK    R               Y+ EL+ACRK++                +NK + +KEEEL RR+S+L
Sbjct:   27 LSYSHTRRLSLPRSHR-DPAAWSAAFSDAAKLLLADYSLSRALSRDPDASLSSASRLAAPLLTTHEAAQYAAWERDPR-IVPRVDWKKLRTSTTATTSAQKARWAVLTHALATLY--KEPGLRPENCKAWVEKYPDRMSLLVAVRKTETVRGDVSAANKQGGKAKRYVHELIACRKVLXXXXXXXXXXXXXXXAINKGSMEKEEELTRRMSRL 235
The following BLAST results are available for this feature:
BLAST of Ggra2397.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q3Z02.010e-2936.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:130034..130969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2397.t1Ggra2397.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 130034..130969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2397.t1 ID=Ggra2397.t1|Name=Ggra2397.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=312bp
MPSKIRHSALVNALPIDYRHGKTFSLPSSSRATPDDWSSMAAYATGLIAG
RYSVATALGKSPEKDPASLSEAADRLLTSREASMFLAWKKDPKSALPSPD
WRRLRTSITGSPAARRRWEQFVPALQLLYGDRDVKLSAEHCKGWADKYVD
AMPLLVAARKMHRARFYARCVGSSASAKLDYLELLACRKLMSEIGAQRVK
TSSRMKQLNKYAADKEEELLRRISKLNITDAPSSRDSAMKTSEARDAAYS
KLTKTRTQRISDAAMVKKQNIELTSLETALRVRIQALEERLESSRRSAPS
SSGRTRSRSRR*
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