Ggra2297.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2297.t1
Unique NameGgra2297.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
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BLAST of Ggra2297.t1 vs. uniprot
Match: A0A2V3J2C5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C5_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 2.080e-62
Identity = 95/152 (62.50%), Postives = 122/152 (80.26%), Query Frame = 0 
Query:    1 MSDYNRPPPPVTGFPKIAVVCAGHTPLGRRLAHDLLQSDKVEKVHVIVPEPVRHFDKLPLPIQRKLTVYIANFADLDTTLSRIGEADYAFCVSATDKRAYEVMGRTRFKQYNYHAPCQFIRKMFELGVLHLSILSHLNADAHSKSEFFKLRG 152
            M++Y+RPPPPVTGFPKIAVVC  HT LGRRL  +LLQSD+VE+V  I PE VR  +KL   ++RK+  + A+F D+D  LSRI EADYAFCV+ TDKRAYE M R  F++ N+  P QFIRKMFELGVLHL+ILSH+NAD+HS+++F++++G
Sbjct:    1 MANYHRPPPPVTGFPKIAVVCGAHTDLGRRLCRNLLQSDEVERVIAIAPERVRDLEKLSWSVERKMESHKADFGDMDKVLSRIREADYAFCVTNTDKRAYEAMDRRSFRETNFTGPSQFIRKMFELGVLHLTILSHVNADSHSRTDFYRVKG 152
The following BLAST results are available for this feature:
BLAST of Ggra2297.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2C52.080e-6262.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 15..210
e-value: 2.4E-13
score: 51.7
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 17..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:56831..57574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2297.t1Ggra2297.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 56831..57574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2297.t1 ID=Ggra2297.t1|Name=Ggra2297.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MSDYNRPPPPVTGFPKIAVVCAGHTPLGRRLAHDLLQSDKVEKVHVIVPE
PVRHFDKLPLPIQRKLTVYIANFADLDTTLSRIGEADYAFCVSATDKRAY
EVMGRTRFKQYNYHAPCQFIRKMFELGVLHLSILSHLNADAHSKSEFFKL
RGELELFADELVQEAGEYAPYMSLYKIPTPVARSNGRPNREVLEKDLVLA
MQYHAFSTGVLRKGPSCKRRKLQYEELFTDDVSELVSEAKSIRWGEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf