Ggra2284.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2284.t1
Unique NameGgra2284.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length650
Homology
BLAST of Ggra2284.t1 vs. uniprot
Match: A0A2V3IFR3 (DUF659 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFR3_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 1.200e-23
Identity = 118/469 (25.16%), Postives = 212/469 (45.20%), Query Frame = 0
Query:   14 LLARLVVEENLPFSILNKERGRDKPFAEYVQFIRRGISVPS-GYQMRTL-------IEKNYSILMDRFKNELTNILHKGYGTLMFDSSKEVNGAPMTNMLVRVMDSSRA---------------------------------NVDNYAAIVTDNTGSVNNACENLMRRFPRLAASQKQAHVADHLMADIGEISWIREVLGTVSDLV-------VFYRRYISLKEGLLMMMKLYNSNVRMDRSAARRTGNLATTVSNDPSRSTSDRVPDSSAILQSIPNPSFATTHLQNLVDDCVEDEEIVCEEDDGPIQSGPGGPEYSDDFDDLFSAQSVRDKLARRKSFVDPILNDELFRRVEQAHGILKVCRTYLRVFDAETSLCSEVFEATRILENSLRQLPLEN-YPSPRQSNCEHLLKVFRNRKEGTLPGMKRVKITLLSDPHYASALPDPFRTPLENIVEHMRHFRAHLKDYL 433
            LL + +V+  LPFS+L+++ G D    ++ Q I   I++PS G Q+ T        +++ Y  +  R    +  +L + Y TL+FD   +  GA + N+L+ +  + +                                  ++    A+V+DNT S   A E L +++  L + Q Q H+A+ LM DIG+ISW++EVL TVS ++         Y R+  LK            N++    ++  T                 ++P ++ +   +    FA++  +++    +  +E++    D P            DF+        R+K   R  F   + ND L++++   + IL++ R YLR+FD E+SL SEV+ AT  L   ++ LPL + Y + R+++   +++VF  R    L G  R K+ LL+  H  S L D  R+ +E +  +  H   H+  ++
Sbjct:  179 LLTKFMVKHMLPFSLLSRQPGSD----DFFQLIT--IAIPSLGQQIPTPRRMGNKNVKRYYEAMRSRVLESIAGLLSERYATLVFDGWTDTCGASVVNVLLSLTGTQKVRRTFFLRSIYTGSKSCDAALYAGICEEAIAEYGDIQRVCAVVSDNTSSCIKAKELLFQKYTHLVSVQDQPHMANLLMQDIGDISWVKEVLSTVSTVIGDLRNQPKLYSRFKDLKTAF---------NLQCSAQSSLGTDCYGRV-----------QLPKTAILPCQMVATRFASS--ESMAASFLRSKEVLLRLVDCP------------DFNARLYDSRNREK---RDLFKQNVRNDSLYQKLLDIYHILRLIRQYLRLFDDESSLLSEVYPATMQLFTKIKSLPLTSFYTAERRAD---VIRVFEER----LNGANR-KVALLTPLHRVSYLLD-IRSMMEKLNAYRPHVIRHILSFV 595          
BLAST of Ggra2284.t1 vs. uniprot
Match: A0A2V3ITC0 (DUF659 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITC0_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 3.210e-20
Identity = 105/438 (23.97%), Postives = 189/438 (43.15%), Query Frame = 0
Query:   69 LMDRFKNELTNILHKGYGTLMFDSSKEVNGAPMTNMLVRVMDSSRA---------------------------------NVDNYAAIVTDNTGSVNNACENLMRRFPRLAASQKQAHVADHLMADIGEISWIREVLGTVSDLVVFYRRYISLKEGLLMMMKLYNSNVRMDRSAARRTGNLATTVSNDPSRSTSDRVPDSSAILQSIPNPSFATTHLQNLVDDCVEDEEIVCEEDDGPIQSGPGGPEYSDDFDDLFSAQSVRDKLARRKSFVDPILNDELFRRVEQAHGILKVCRTYLRVFDAETSLCSEVFEATRILENSLRQLPLEN-YPSPRQSNCEHLLKVFRNRKEGTLPGMKRVKITLLSDPHYASALPDPFRTPLENIVEHMRHFRAHLKDYLDS------EGVDTAGRSNVAFMNEIVAQYQEVHSLWIQQ 466
            +  R    +  +L +GY TL+FD   +  GA + N+L+ +  + +                                  ++    A+V DNT S   A E L +++  L + Q Q H+A+ LM DIG+ISW++EVL  VS ++   R +  L      +   +N       S                      ++P ++ +   +    FA++  +++    +  +E++    D P            DF+        R+K   R  F   + ND L++++   + IL++ R YLR+FD E+SL SEV+ AT  L   ++ LPL + Y + R+++   +++VF  R    L G  R K+ +L+  H  S L D  R+ +EN+  +  H   H+  ++ S      E + + G  + A +  +  ++ EV   W  Q
Sbjct:    1 MRSRVLESIAGLLSEGYATLVFDGWTDTCGASVVNVLLSLTGTQKVRRTFFLRSIYTGSKSCDAALYAGLCQEAIAEYGDIQRVCAVVGDNTSSCIKAKELLFQKYTHLVSVQDQPHMANLLMQDIGDISWVKEVLSIVSTVIADLRNHPKLYSRFKDLKTAFNLKCSAQSSLGTDCYGRV-------------QLPKTAILPCRLVATRFASS--ESMAASFLRRKEVLLSLVDCP------------DFNARLYGSRNREK---RDLFKQNVRNDSLYQKLLDIYHILRLIRQYLRLFDDESSLLSEVYPATMQLFTKIKSLPLTSFYTAERRAD---VIRVFEER----LNGANR-KVAVLTPLHSVSYLLD-IRSMMENLNAYRPHVITHILSFVRSDLFPVNEKLSSDGGEDAA-VQRLCDEFLEVRQSWRSQ 398          
The following BLAST results are available for this feature:
BLAST of Ggra2284.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IFR31.200e-2325.16DUF659 domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3ITC03.210e-2023.97DUF659 domain-containing protein n=1 Tax=Gracilari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..583

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:1037450..1040850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2284.t1Ggra2284.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 1037450..1040850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2284.t1 ID=Ggra2284.t1|Name=Ggra2284.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=650bp
MRPSDAQQEMSELLLARLVVEENLPFSILNKERGRDKPFAEYVQFIRRGI
SVPSGYQMRTLIEKNYSILMDRFKNELTNILHKGYGTLMFDSSKEVNGAP
MTNMLVRVMDSSRANVDNYAAIVTDNTGSVNNACENLMRRFPRLAASQKQ
AHVADHLMADIGEISWIREVLGTVSDLVVFYRRYISLKEGLLMMMKLYNS
NVRMDRSAARRTGNLATTVSNDPSRSTSDRVPDSSAILQSIPNPSFATTH
LQNLVDDCVEDEEIVCEEDDGPIQSGPGGPEYSDDFDDLFSAQSVRDKLA
RRKSFVDPILNDELFRRVEQAHGILKVCRTYLRVFDAETSLCSEVFEATR
ILENSLRQLPLENYPSPRQSNCEHLLKVFRNRKEGTLPGMKRVKITLLSD
PHYASALPDPFRTPLENIVEHMRHFRAHLKDYLDSEGVDTAGRSNVAFMN
EIVAQYQEVHSLWIQQGIIRGEGDSGSGMTELQRQRGFRRPDIRRRVEYP
EAPGVSSVQLRANHVWLVAPINWTELQLSTPRYPRGRPRVSPSASRRDIF
LRNVGSTAPRSSARAQDGAPPSDLSLEQTRTEGFPAALPEAMRLFVSSTL
TLAELSGRRMLYTGGGAALRDRPSENAVGAPLNDKDSNDLESRGKEDGD*
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