Ggra2204.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2204.t1
Unique NameGgra2204.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length970
Homology
BLAST of Ggra2204.t1 vs. uniprot
Match: A0A2V3J0I8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0I8_9FLOR)

HSP 1 Score: 896 bits (2316), Expect = 1.970e-312
Identity = 504/967 (52.12%), Postives = 660/967 (68.25%), Query Frame = 0
Query:    5 HRPLESSKEPQAFRIRRPSNRESSIYPSSSSPQQSSPLSKFNFRSVRDHFQEPTSWLERSELTSKNFDAHDFLQRSILQRHDRSGTNIPHLPMLDSSVDADAALATLDTVETTLRAHRDESIGEEIAARDKLKRVLHGSSKKRDELCTTAHKVRANVVTFGEAGKQAVKSLQEGSLLLNKHISSLASLVEARDLVALLTDQASELDAVHVSKLLAKASKILEGDSIKKHLSTDELERAKSQVDVCQKELIESIFNWMREAVDSANCITVRDCALVASELDVYDRFVQEYISHIVSLEGVTTSSESFPTEATDILQLFKETCSDAISLLRRMIPAIVDMFSDPSIPLCVLVRLITERKVITTATEIFNKTKHIIEIGSDKTTLKVLEAQSSKDLDTQSRNSGLSVPSMDFCHNSPSQILNDDLEIQRQQLMGRKAYLVLSVDIFKALAKYRSDVRNTCRDLGHSVIESIFSALEHSHEEFVYQQTRSHLELEKKWIDDQLAIAFVDISYIESSLPQLVPTKHSDPKVFHRYARFYGATIVRFKDITSTAINFTSKSIDRISDIVMALAEGSLDFVENASETAYP-----KDCIVGCAKADFHVSSASLDTMESRPESSLKAMDRETEGSSQSQISMREKLTVLVRNVVHDILRCLMVTYVANAETVLQAAAPLLPVCKEDSVNEELWAETSSPLVAYTMAVEILSQANEHMANFLLNLKSTQSATVDSKISIDHEFNMYHLVSQEARDVLHTELTSGLSELSAEAQQGVTAGLSAMRFRVFEILSVPEAKPSYSSLSGHCSEAIYNNFEEKPGLSGIPKPKPSRAFVEVCNFLEHQIRFIVKNIKGCNRDFVLAKVGALTREAVLKCWCSSPGHISLSGAMQMIADSRIILSPFQTHGVSVENVRCLPSLAQLFLETPDGLWACVECTTLADVDARILVSLLRKRPDSGSREIIKVCQSLGASELDLT 966
            H  LESS EPQAFRIRR S R+S +YP+S   + SS L+    R  R+HFQEPTSWL++ EL S +FDAH FLQRSI++ HDR+GTNIPHLP+ DS +DAD ALATLDTVE+TLR +RD+S+ EE +AR++L+R+LH S+KK++EL +T+ KV ANV  FGEAGKQAV SL+EG + LN  ISSL SLVEARDLVALLTDQAS+LDAVHVSKLLAKAS+IL G+++K  +S DE + A+S+V+ CQ+EL + IF WMR+AVDS++  TVRDCAL A+EL +YDRFV+EY+ ++VSLE V  S      +  ++L  F   CSDA+  +R +IPAIVD F DP  PL VLVRL+TE++V++ A+ I N  K   E  + + T +  + ++ +      ++     P   F H+      ++      Q ++ RK YLVL  ++FKALAKY++D+ +T   L   + E  F A E  +  FV +Q  S+LELEKKW+DDQLA AF  IS IE+ LPQL PT  SD +VFH+YARFY      FK  T   I+ T ++I R+S++ +A    + D V +  + + P      D I      + H SS S  T+ESR  S+L  +  +   S    +     L   +R  + D+LR L++ YVANAET LQAAAPLLP CKED+V EELW  T+SPL AY MAVE+LSQANE MA FLL+LK  +S   D++  +  E  +  LVSQE RD+LH++L  GL EL AEAQQGV A  SA+ FR+  +LSVPEA  +YSS+S     +     +++  L  IPK +P+ AF++ C FLE QI F+  N+  CNRDF+L ++G L R+ VL CW   P  I+L G+MQMIADSRIILS FQ HGVSVE VRCLPSLAQLFLE P+GLW+CVE + L +VDAR+LVS+L+KRPD GSR IIKVCQSLGA+  +L+
Sbjct:    4 HHALESSNEPQAFRIRRLSKRDSILYPNSLGEESSSALTSLKIRKEREHFQEPTSWLQKDELVSTSFDAHGFLQRSIMECHDRNGTNIPHLPVFDSVIDADLALATLDTVESTLRVYRDQSLDEEFSARERLRRMLHTSAKKKEELNSTSDKVLANVTNFGEAGKQAVNSLKEGIVSLNAQISSLLSLVEARDLVALLTDQASQLDAVHVSKLLAKASRILRGEAVKSVISMDERKNAESEVNGCQQELTDRIFTWMRDAVDSSSNTTVRDCALAATELGLYDRFVREYVHYLVSLEEVPASEAPSGAQVDNMLASFTAICSDAVRTIRNVIPAIVDTFVDPLAPLAVLVRLVTEKRVLSGASLILNCAKR--EAEATRETSRSDDCRNRRGEGFGRKSDREKFPRPSFGHHFSLTASDERENDVHQGIIDRKRYLVLHTELFKALAKYKTDILDTHHQLSLPIAEDAFWASEGPYATFVTEQALSYLELEKKWVDDQLATAFSSISGIEARLPQLAPTPRSDFRVFHKYARFYNQVSTGFKQTTVLCIDITFEAIHRMSEVFLAF---TADSVRSKLKDSDPGGNTRNDSICLGKSEEQHPSSISSGTIESR--SALSPLSEDGTASFAKAVP-EGTLATRIRVAIQDVLRGLLLLYVANAETALQAAAPLLPTCKEDAVLEELWVFTASPLTAYVMAVEVLSQANELMARFLLSLKKAKSHETDAEGFLVLETPLNLLVSQETRDLLHSQLRGGLEELGAEAQQGVKAATSAVGFRLNAMLSVPEAVNAYSSVSDTKRLSKVPE-KQRARLLNIPKLQPTNAFIKACKFLEQQIIFVASNVNECNRDFILWELGVLARDVVLHCWSKGPPPITLKGSMQMIADSRIILSTFQNHGVSVEAVRCLPSLAQLFLEPPEGLWSCVESSALTNVDARVLVSMLKKRPDFGSRGIIKVCQSLGANVEELS 961          
BLAST of Ggra2204.t1 vs. uniprot
Match: R7QC67 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC67_CHOCR)

HSP 1 Score: 446 bits (1148), Expect = 5.400e-138
Identity = 308/880 (35.00%), Postives = 491/880 (55.80%), Query Frame = 0
Query:   46 NFRSVRDHFQEPTSWLERSELTSKNFDAHDFLQRSILQRHDRSGTNIPHLPMLDSSVDADAALATLDTVETTLRAHRDESIGEEIAARDKLKRVLHGSSKKRDELCTTAHKVRANVVTFGEAGKQAVKSLQEGSLLLNKHISSLASLVEARDLVALLTDQASELDAVHVSKLLAKASKILEGDSIKKHLSTDELERAKSQVDVCQKELIESIFNWMREAVDSANCITVRDCALVASELDVYDRFVQEYISHIVSLE--------GVTTSSESFPTEATDILQLFKETCSDAISLLRRMIPAIVDMFSDPSIPLCVLVRLITERKVITTATEIFNKTKHIIEIGSDKTTLKVLEAQSSKDLDTQSRNSGLSVPSMDFCHNSPSQILNDDLEIQRQQ----LMGRKAYLVLSVDIFKALAKYRSDVRNTCR--DLGHSVIESIFSALEHSHEEFVYQQTR---SHLELEKKWIDDQLAIAFVDISYIESSLPQLVPTKHSDPKVFHRYARFYGATIVRFKDITSTAINFTSKSIDRISDI---VMALAEGSL-DFVENASETAYPKDCIVGCAKADFHVSSASLDTMESRPESSLKA---MDRE---TEGSSQSQIS--MREKLTVL-VRNVVHDILRCLMVTYVANAETVLQAAAPLLPVCKEDSVNEELWAETSSPLVAYTMAVEILSQANEHMANFLLNLKSTQSATVDSKISIDHEFNMYHLVSQEARDVLHTELTSGLSELSAEAQQGVTAGLSAMRFRVFEILSVPEAKPSYSSLSGHCSEAIYNNFEEKPGLSGIPKPKPSRAFVEVCNFLEHQIRFIVKNIKGCNRDFVLAKVGALTREAVLKCWCSSPGHISLSGAMQMIADSRIILSPFQTH 895
            +F+  + H  EP SWL  S+L+S +F AHDFLQ ++ QR++ S  +  HLP+L  S +ADAALA LDTVE+ LR  RD S  EE  ARD+L++VLH S+KK+++L   A  V ANV   GEAG+QA  +L      L    S LA+L + RDLV+LLT ++SELD V VS+LL+KA    E  S+   LS D+   A+ +++ C+ EL  S+ +WMR +VD+ N   V++CA+ A EL++   F+  YIS+I  L+        G     E   ++  D+LQ F+    + ++ +  MIP+I   F++ S  +  L+RL++ERKVI  A    + T H + +    +T  +   ++   L T       +  S++      S  + ++ E +R++    L+ ++  L +  ++FK++ K R+D+   C   +  HS    IF   E   + F+    +     L  EK W+D QL  AF DI+ +E++ P+L P ++SD   +HRY  FY     R+  +T  AI  T +S+ RI+ I   V+++   SL DFV + +E            ++  H +S     +E   ES LKA    +R    TEG++  +I+  M  K  +  +  V+ ++L  L++ Y+ANAET+LQAA+ LLP+ + D+   +LW    SPL AY  AVE+L ++N+ ++ FLL L+ +   +  S  S+  E  +   +    R+ LH +LT+GLS+L AEAQ GV A ++++R R+F +LS  +A  +Y SL+   S     N ++ P   G+   +PS AF+    F+E Q+  ++ N+   NR+FV++++  + +E VL+ WC   G + L+GA Q+IAD R +   FQ H
Sbjct:  100 DFQPSQSHPFEPASWLIASDLSSPSFSAHDFLQSALFQRYEASRPS--HLPVLGDSFNADAALAALDTVESGLRRQRDVSKREEDLARDELRKVLHLSAKKKEQLVRAADTVSANVSALGEAGRQAALALNADVSTLRTSASQLATLQDTRDLVSLLTTESSELDVVRVSRLLSKARNHCEDGSLAAVLSEDDYLVAREEIERCENELASSLDSWMRNSVDAGNNNIVKECAMAAEELNISASFIDSYISYIFRLDHTGPDDSNGALRGIEHMNSQ--DMLQKFRIAAWETVNSVGEMIPSISQSFNNSSKTMISLLRLLSERKVIPIA----DHTMHSL-LSQHVSTTSLNNDRADDFLSTTPTRYATARDSVEILR---SLSITENREEKREEADSVLLQKRQDLTVCGEVFKSMGKLRNDLLVQCSIPECNHS---KIFQ--EQGMDPFICFARKWVPQLLRQEKAWVDQQLGAAFFDITRVEANAPRLAPRENSDAAAYHRYRSFYSQISSRYLQMTGNAIESTHESLCRIATILSTVLSIESLSLKDFVASFTEAE----------QSPMHENSL----LEHISESVLKAERFQERREVLTEGTASPKINTTMSSKHAIAEISAVLREMLDGLVICYLANAETILQAASHLLPISEADAQAHDLWVSGVSPLTAYMQAVEVLLRSNQALSEFLLTLEFSDHVSQFSSPSLSPEDELAMYIPSRTRERLHRDLTTGLSDLGAEAQVGVRAAVTSVRARLFAMLSSKDAMQAYVSLNRDDSAVFNENLKQGPSSLGMDV-EPSPAFLNASAFVEQQLHSVLSNVHSANREFVISELSVIAKETVLQHWCLCAGPLFLAGAFQLIADGRAMARVFQDH 947          
The following BLAST results are available for this feature:
BLAST of Ggra2204.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0I81.970e-31252.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QC675.400e-13835.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:641115..644024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2204.t1Ggra2204.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 641115..644024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2204.t1 ID=Ggra2204.t1|Name=Ggra2204.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=970bp
MVTRHRPLESSKEPQAFRIRRPSNRESSIYPSSSSPQQSSPLSKFNFRSV
RDHFQEPTSWLERSELTSKNFDAHDFLQRSILQRHDRSGTNIPHLPMLDS
SVDADAALATLDTVETTLRAHRDESIGEEIAARDKLKRVLHGSSKKRDEL
CTTAHKVRANVVTFGEAGKQAVKSLQEGSLLLNKHISSLASLVEARDLVA
LLTDQASELDAVHVSKLLAKASKILEGDSIKKHLSTDELERAKSQVDVCQ
KELIESIFNWMREAVDSANCITVRDCALVASELDVYDRFVQEYISHIVSL
EGVTTSSESFPTEATDILQLFKETCSDAISLLRRMIPAIVDMFSDPSIPL
CVLVRLITERKVITTATEIFNKTKHIIEIGSDKTTLKVLEAQSSKDLDTQ
SRNSGLSVPSMDFCHNSPSQILNDDLEIQRQQLMGRKAYLVLSVDIFKAL
AKYRSDVRNTCRDLGHSVIESIFSALEHSHEEFVYQQTRSHLELEKKWID
DQLAIAFVDISYIESSLPQLVPTKHSDPKVFHRYARFYGATIVRFKDITS
TAINFTSKSIDRISDIVMALAEGSLDFVENASETAYPKDCIVGCAKADFH
VSSASLDTMESRPESSLKAMDRETEGSSQSQISMREKLTVLVRNVVHDIL
RCLMVTYVANAETVLQAAAPLLPVCKEDSVNEELWAETSSPLVAYTMAVE
ILSQANEHMANFLLNLKSTQSATVDSKISIDHEFNMYHLVSQEARDVLHT
ELTSGLSELSAEAQQGVTAGLSAMRFRVFEILSVPEAKPSYSSLSGHCSE
AIYNNFEEKPGLSGIPKPKPSRAFVEVCNFLEHQIRFIVKNIKGCNRDFV
LAKVGALTREAVLKCWCSSPGHISLSGAMQMIADSRIILSPFQTHGVSVE
NVRCLPSLAQLFLETPDGLWACVECTTLADVDARILVSLLRKRPDSGSRE
IIKVCQSLGASELDLTDEI*
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