Ggra2139.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2139.t1
Unique NameGgra2139.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length885
Homology
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BLAST of Ggra2139.t1 vs. uniprot
Match: R7QAZ3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAZ3_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 2.560e-35
Identity = 73/144 (50.69%), Postives = 100/144 (69.44%), Query Frame = 0 
Query:  657 DSDSPNASQRGSQPLNVKLTSLSTRRRKRKVDYEEERKRLTEDELSTIRLAFVAHYPPPPSNAQAQGRFEMKYGREMSQAMIQGLWENELKHWSERWWSFYMSFNDYVRAKKLAKPVDKNPTVNMKEVEDWAKSFYEEHGDARV 800
            D D+ + SQ GSQ +++ + +L  +++K     E    R+T DELSTIR  FV +YP PPSN  AQGRFE +Y REM +AM++ LW+NELK WS+RWW+F+  F D+ R KK  KP+ KNPT+   EV+ WAK F+ +HGDAR+
Sbjct:  421 DGDACSPSQGGSQTMSIVVEALPVKKKKATRYPEHLWTRMTSDELSTIRKGFVKYYPTPPSNMHAQGRFEQQYMREMPKAMVEALWKNELKPWSDRWWNFFTMFGDFSREKKKQKPLGKNPTLKQAEVDRWAKEFHAKHGDARI 564
The following BLAST results are available for this feature:
BLAST of Ggra2139.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QAZ32.560e-3550.69Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 655..677
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 638..654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..826
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..610
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..679
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..884
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:405616..408270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2139.t1Ggra2139.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 405616..408270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2139.t1 ID=Ggra2139.t1|Name=Ggra2139.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=885bp
MNQFPDNRQAYDPLCNFAVDSPLIGSHAYAQASRGHAYGNHSGLPPQDGE
YQQLHHQSATTAITPGVSTPTHNQTSRYLAQASGQHHFNLPKAATMNTAC
VSNAACTSNVAFASNAASASNTTYASNAACSFRTSYPHLSNEQPYQILAP
RVSSQPQVPDRPHGSNVLHVGGNHVVGWRGNPSEYQTALAEKGSFNLSKP
LSPSVPQQKKNSPKQTGALSVPQLCHPTPDFCGEMGNQSRWLPISTGVLP
SLHIPQNKDAPLDFPASHIPKRENVVATPVGGIYQPHQLATAVNMKQETF
AVQLGRPTSPTESREPKNVPKPIVASANNTKMVDGCRLALKVKDEPGVRL
GALPQESSKKEDPSRRRKSTQQHTDDIFSTIPLKTSKYASQNEAKARRGK
AGAMKGERRQGSRVMKSTKTAGKLRGKRGLDSFSLLEHSGDESDNSLQGR
AVSRNDKQRPRKRTSTFSDSDDEDFDDIGLGSRQKQSEEKRGNGQCGSSG
VRSGNASQMKGGELREGRRRSSRILKRKVNPELESRRNPVKKRREVHRNE
RKVRQTKSLDELTDSDGAHDELQDANGAQSDSSDSSDDFVPTSEREKRFA
EMRAEWEASQKTGEKQSMTPRKGAKRTPTKRTKRKRTPAKGNASDGDNTR
ADDQTLDSDSPNASQRGSQPLNVKLTSLSTRRRKRKVDYEEERKRLTEDE
LSTIRLAFVAHYPPPPSNAQAQGRFEMKYGREMSQAMIQGLWENELKHWS
ERWWSFYMSFNDYVRAKKLAKPVDKNPTVNMKEVEDWAKSFYEEHGDARV
SRNGQTPDQSSSDDPASNPSNGSKNRNDNQLDDKSSNSEKTVSDMCEPGA
DVSARNVMPDNAEVASGAYTSGDSRVPDSRGNIN*
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