Ggra2122.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2122.t1
Unique NameGgra2122.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length503
Homology
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BLAST of Ggra2122.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: uncharacterized protein LOC114947004 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF44F86 (LOW QUALITY PROTEIN: uncharacterized protein LOC114947004 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF44F86)

HSP 1 Score: 60.1 bits (144), Expect = 8.050e-6
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:  112 TALHEAASKGNVELVDELLAHGADVHCNDDNNDTPLHSAAGSNEETVAFRLWRAGADPLK 171
            TALHEA+  G +++VD L+AHG +V+ +D    TPLH+A   N+  VA +L   GADP K
Sbjct:  110 TALHEASKSGQLQIVDYLIAHGXNVNASDSRGWTPLHNAICGNKTDVALKLLCNGADPRK 169
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BLAST of Ggra2122.t1 vs. uniprot
Match: A0A4Z0C1P1 (Ankyrin repeat domain-containing protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0C1P1_9BURK)

HSP 1 Score: 57.8 bits (138), Expect = 9.190e-6
Identity = 55/202 (27.23%), Postives = 92/202 (45.54%), Query Frame = 0 
Query:  114 LHEAASKGNVELVDELLAHGADVHCNDDNNDTPLHSAAGSNEETVAFRLWRAGADPLKQNSKKQTALSLLPEHSKVAEMMRTEPHLGRSLPSAQIAQLHQRFTYLASGSYSGEQTVTAQDAIPELQRALMDAGTPS------HEDDVEEVVMEQMDKTANRHESGFALLLRHDADVNFRTEEGLSALRYALGKRNPQIVQML 309
            LH AA +G++EL+D+L+A  AD++  D +  TPLH A  + +      L RAGA        +  A+++    + VA+ + T   L     SA++       T L + ++ G   V          R L+ AG P       H   V E ++  +     RH++    L+   AD+     EG + L+ A G+   ++V+ML
Sbjct:   48 LHAAAHRGDIELIDKLVAAKADLNARDRHGRTPLHVATFARQHAAIRALARAGAGLELLEHDRYDAVTI----ASVADDVETLDLLLSLGASAKLTTSRYDGTALIAAAHLGHDGVV---------RRLIAAGAPLDHVNNLHWTAVIEAIV--LGDGGRRHQATLKALIDAKADLQLADREGRTPLQLARGRGYGEMVRML 234
The following BLAST results are available for this feature:
BLAST of Ggra2122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
LOW QUALITY PROTEIN: uncharacterized protein LOC114947004 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF44F868.050e-648.33LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
A0A4Z0C1P19.190e-627.23Ankyrin repeat domain-containing protein n=1 Tax=R... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 13..40
e-value: 650.0
score: 6.4
coord: 77..106
e-value: 0.021
score: 24.0
coord: 289..318
e-value: 2300.0
score: 2.3
coord: 109..138
e-value: 7.0E-4
score: 28.9
coord: 142..171
e-value: 200.0
score: 10.3
coord: 44..73
e-value: 5.0E-4
score: 29.4
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 60..140
e-value: 4.3E-12
score: 46.4
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 16..57
e-value: 1.2E-6
score: 29.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 142..174
score: 8.789761
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 77..109
score: 10.97998
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 109..141
score: 12.39561
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 44..76
score: 11.80799
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 237..329
e-value: 1.1E-6
score: 30.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 9..107
e-value: 6.8E-26
score: 93.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 108..197
e-value: 1.5E-20
score: 75.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 267..318
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 16..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR24134:SF9ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 269..325
coord: 16..108
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 55..190
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 269..325
coord: 16..108
NoneNo IPR availablePANTHERPTHR24134:SF9ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 55..190
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 77..105
score: 9.940542
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 44..76
score: 10.444637
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 109..141
score: 11.028328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:348495..350866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2122.t1Ggra2122.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 348495..350866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2122.t1 ID=Ggra2122.t1|Name=Ggra2122.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=503bp
MTSFHHPHADMPDGDLHKAAKRGDLPTVQTLIAYGVELDSPGKDGHTALI
CAARKGHLLVVKALVAAGADMCATDDLGVTPLLYATAGAHTHVVKALLAR
GANANETTEFGTALHEAASKGNVELVDELLAHGADVHCNDDNNDTPLHSA
AGSNEETVAFRLWRAGADPLKQNSKKQTALSLLPEHSKVAEMMRTEPHLG
RSLPSAQIAQLHQRFTYLASGSYSGEQTVTAQDAIPELQRALMDAGTPSH
EDDVEEVVMEQMDKTANRHESGFALLLRHDADVNFRTEEGLSALRYALGK
RNPQIVQMLWLEDADPRGTRFEEFSTDIEHATIPLMTCDSTDKETFRKTD
EYIPRVRFFVLAKKSRNGTYKKQLDRENIEVFVETGDVDSRVSLLDSGDD
SPVSLLDSTSGMCFEDFESAFKTLKDFYASPERCAARKEHRNSFGNAIRM
QALLQSQIAVYLLRTVFKKLMGEVEDEGPKNYWPFARNHSWDEDALKDLL
ME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf