Ggra2042.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2042.t1
Unique NameGgra2042.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length135
Homology
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BLAST of Ggra2042.t1 vs. uniprot
Match: A0A2V3IXP0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXP0_9FLOR)

HSP 1 Score: 185 bits (469), Expect = 4.690e-58
Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = 0 
Query:    5 KVTFALVLVLAALANAAVVHQAKLPGKCWQRTQQCCYQITECGWRCREGGGFKHCWRKYCNVPVCSEIKARTAVPTKPEDEVEWESAVVTDCTEKPDECGSHPPGMDFEVDDQVTEELPMPSGEEEMEE 133
            K+T ALVL  A  A   V  Q + PG+CWQR+QQCC+Q  ECGWRCREG GFKHCWRKYCN  VCSEIKARTAVP KP+D V W  +V+ DCTEKPDECGSHPPG+D+EV++ + EELPMPSGE E EE
Sbjct:    5 KLTLALVLATALFAGF-VSAQEETPGRCWQRSQQCCFQEVECGWRCREGSGFKHCWRKYCNKKVCSEIKARTAVPNKPDDSVGWGDSVMIDCTEKPDECGSHPPGIDYEVEEPM-EELPMPSGEMEDEE 131
The following BLAST results are available for this feature:
BLAST of Ggra2042.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXP04.690e-5868.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000030_piloncontigtig00000030_pilon:172020..172424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2042.t1Ggra2042.t1Gracilaria gracilis GNS1m malemRNAtig00000030_pilon 172020..172424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2042.t1 ID=Ggra2042.t1|Name=Ggra2042.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=135bp
MIPVKVTFALVLVLAALANAAVVHQAKLPGKCWQRTQQCCYQITECGWRC
REGGGFKHCWRKYCNVPVCSEIKARTAVPTKPEDEVEWESAVVTDCTEKP
DECGSHPPGMDFEVDDQVTEELPMPSGEEEMEEM*
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