Ggra2022.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A2V3IIU5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU5_9FLOR) HSP 1 Score: 278 bits (712), Expect = 2.710e-82 Identity = 189/464 (40.73%), Postives = 240/464 (51.72%), Query Frame = 0
Query: 16 QNDIDCIDILAHRLAFPDHVVLQARFIHANAFPMHPDPYTSACALYIASIAIHAEQIPLHPLERVLRAADAQ-------------PQLLAPQSDSDSDIEDEIQPVQPAAASPTDRRVHSASVAFMVSAHVWRQLCFLMDSGLLHDHPRVLQLAWLFFLVARSSLTPPAECSLTYEQAHHVMLASVVHAGLIAGEDPGHAIFRATCAVPNELRHYRRALDTQLHRHLHAILPLFPRPDSQLEVICQDLDALYAQQLTGYKDRVATDERIFLHAPQLTAFTAQPLANPLGPVSARKAASNSEDTPSAAMSTANGSSAXXXXXXXXPQPQASNGPSTTNHVMGATQPQAQSTPQATSALGRKRALDEDVXXXXXXXAITPRPQRRQRRADDEPVPPSAARPPTPARSTPARRARSRAAMLTPRSSPN-FSRYALSTRPDALDALATVAAISPRYV-----TRPPTP 460
Q++ DCID L HRLA PDH+ A +IH A P DPYT+ACALY+ASIA A+QIP PL R+L AA + P ++ + P +P RRVH + AFMVSAHVWR+L +L+D LL +HP V +L WLFF+VA+++++ P +C+LT+ QA+H++LA ++ +G I DP A+FR TC VP+EL+HY+RALD LH+ + LP P D L+ ICQ LD Y QLT K R+ATDERIFLHAP L A + P++ P S P QP A +TP XXXXXXX PS+ARPPTPAR R R+A TP S+P FSRYA STR DALDALATVAA++P T PP P
Sbjct: 20 QHEPDCIDFLVHRLALPDHLATLAHYIHNTALPTASDPYTAACALYVASIAFRADQIPQLPLSRLLGAASSDRIPLRITTHFTHNPTMVVDSERHSPTSPQHLTPPSTPPEAPLVRRVHLSHTAFMVSAHVWRKLRYLIDRNLLVNHPSVPRLPWLFFIVAKATISSPTDCNLTHVQAYHLLLACLLQSGFIEAPDPERALFRVTCVVPSELQHYKRALDDLLHKCIRTRLPFLPHSDQVLQQICQQLDHAYDAQLTNVKHRLATDERIFLHAPNLAAVGSPPIS-----------------------------------------PVFSASPLNQ-------QPSASTTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSH----------PSSARPPTPAR-------RPRSASHTPMSTPTRFSRYAASTRADALDALATVAAVTPHSAASLPATPPPQP 418
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A2V3IIT0 (Retinoblastoma-associated protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIT0_9FLOR) HSP 1 Score: 239 bits (610), Expect = 1.040e-65 Identity = 117/184 (63.59%), Postives = 141/184 (76.63%), Query Frame = 0
Query: 507 LRKVTGGGRPLLAIIDVGRRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPE 690
+R + G RPL A+ID+GRR+S ALC VL++ N + R LAVYF A+EGIL+KE RRLS Q KF + VL N +LHKSFLTFAWETTAAA+G++DL VF VAYRAF+VSPFELTKALD FC LVPQMPR LV+H++ CDARILEWMAWR SPLV VLQAY RD + Q + ++ SP+
Sbjct: 1 MRTLAGSPRPLKAVIDLGRRYSDALCNVLKEFNVPHYKRAALAVYFYAIEGILQKEHRRLSNQLHKFSAKVLQNAILHKSFLTFAWETTAAAYGKKDLNVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRSLVNHMINCDARILEWMAWRHDSPLVNVLQAYGRDRLRMQQSSGQASAPGSPQ 184
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A7S3A3H1 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3H1_9RHOD) HSP 1 Score: 105 bits (262), Expect = 1.510e-19 Identity = 77/241 (31.95%), Postives = 122/241 (50.62%), Query Frame = 0
Query: 438 DALDALATVAAISPR-----YVTRPPTPNVAASPTTADDSRTMRWITTLTASRPETN--SESCLTCPLEQVSTTDGLRKVTGGGRPLLAIIDVGRRFSAALCTVLRDT----NSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQ 667
DALDALA VA +SPR + + P P + +P + ++ W+ +L +RPE S + E++ + D + G + +L T LR +++ +RE AVYFA++EGIL E++RL L + HN H + L + ET + A+GRR+ F FD+ PF+LTK +++F P +P+ + HL+ C+ RILE +AW S LV+ L+
Sbjct: 353 DALDALAAVAHVSPRSPCETIMQKGPKP-IPQTPVSVSIV-SVTWLKSLADARPENAGFSPPRQSQHFERMLSRDSWLAICGRAQKMLG-------------TYLRKNYGTITANQKIRETTAVYFASLEGILRAEEKRLKTSN---LDALAHNGTFHCALLAISCETASVAYGRREFAPFPKILDDFDIEPFDLTKVVESFIKHTPGLPKAIGRHLLRCEERILEKLAWMPGSALVRSLE 575
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A7S0BJ67 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJ67_9RHOD) HSP 1 Score: 101 bits (251), Expect = 1.640e-18 Identity = 72/237 (30.38%), Postives = 115/237 (48.52%), Query Frame = 0
Query: 438 DALDALATVAAISPRY---VTRPPTPNVAASPTTADDSRTMRWITTLTASRPETNSESCLTCPLEQVSTTDGLRKVTGGGRPLLAIIDVGRRFSAALCTVLRD----TNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQ 667
DALDALA VA +SPR T P + ++ W+ +L +RPE S P +Q + + + + R LCT R +++ +RE AVYF+++EGI+ E++RL L +++N H++ L + ET + A+GRRD F D+ PF++TK +++F P +P+ + HL+ C+ RILE +AW S LV L+
Sbjct: 104 DALDALAAVAHVSPRSPCETTMQKVPKPIPQTPVSVSIVSVTWLKSLADTRPENAGFS----PPKQSQHFERMLSRDSW-------VAICSRAQKMLCTYWRKHYGTITANQKIRETTAVYFSSLEGIMLAEEKRLKTSN---LDALVNNGTFHRALLAISCETASVAYGRRDFAPFPKILDDLDIEPFDMTKVVESFIKHTPSLPKAVGRHLLRCEERILEKLAWMPGSALVGSLE 326
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A7J7IG24 (Retinoblastoma-like n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG24_9RHOD) HSP 1 Score: 74.3 bits (181), Expect = 6.700e-10 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 0
Query: 539 NSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL 666
+ + + E LAVY+ A+E IL E RR++ F++ +L HK+ L A ET A++G RD F AFD+S F+ K + + + V +P L C +L +AW+S+SPLV+ L
Sbjct: 463 TAQQRMSEALAVYWHALESILNAEVRRMNGSLA-FVTKLLSVEPFHKALLLCAIETVCASYGIRDEIHFDHLLEAFDLSAFDFIKIIGAYVLNVENLPPQAKRRLAACQEYVLCVLAWQSESPLVRAL 589
BLAST of Ggra2022.t1 vs. uniprot
Match: Q98966 (Retinoblastoma protein n=1 Tax=Notophthalmus viridescens TaxID=8316 RepID=Q98966_NOTVI) HSP 1 Score: 72.0 bits (175), Expect = 3.470e-9 Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 0
Query: 552 FAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG----RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL 666
+ ME +L+ E++RLS Q SN+L+N H+S L + E A +G DL F F + P++ K +++F P + R ++ HL C+ RI+E +AWRS+SP+ +++
Sbjct: 434 YRVMEAMLKSEEKRLSVQN---FSNLLNNSAFHESLLACSIEVVMATYGSISRETDLS-FPWILEVFKIEPYDFYKVIESFIKDEPSLTREMIKHLESCEHRIMESLAWRSESPIYELI 548
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A8D0KMR8 (RB transcriptional corepressor 1 n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0KMR8_9SAUR) HSP 1 Score: 72.0 bits (175), Expect = 3.510e-9 Identity = 47/160 (29.38%), Postives = 79/160 (49.38%), Query Frame = 0
Query: 526 RFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGR------------RDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL-QAYNRD 672
+F+ A+ + S R+ R + +Y+ ME IL+ E++RLS S +L+N H S L A E A +G + F ++ F+L K +++F P + R ++ HL CC+ RI+E +AW+S SPL +++ Q+ RD
Sbjct: 423 KFAEAVGQGCAEIGSQRY-RLGVRLYYRVMESILKSEEKRLSIHN---FSKLLNNNAFHTSLLACALEVVIATYGTSRSASQNDSLNTETVLSFPWIINTLNLKAFDLYKVIESFIKAEPNLSREMIKHLECCEHRIMESLAWKSDSPLFELIKQSKERD 578
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A8D2INS4 (RB transcriptional corepressor 1 n=6 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2INS4_VARKO) HSP 1 Score: 72.0 bits (175), Expect = 3.540e-9 Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 0
Query: 550 VYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG-------------RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL 666
+Y+ ME IL+ E++RLS S +L+N + H S L A E A +G DL F D+ F+L K +++F + P + R ++ HL CC+ +I+E +AWRS SPL ++
Sbjct: 460 LYYRVMESILKSEEKRLSIHN---FSKLLNNGIFHTSLLACALEVVIATYGISRNTSQSNNMTMETDLS-FPWIINILDLKAFDLYKVIESFIKVEPSLTREMIKHLECCEHQIMESLAWRSDSPLFDLI 585
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A2I0TQH2 (RB_A domain-containing protein n=1 Tax=Limosa lapponica baueri TaxID=1758121 RepID=A0A2I0TQH2_LIMLA) HSP 1 Score: 67.0 bits (162), Expect = 1.250e-8 Identity = 43/146 (29.45%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 525 RRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQV----------FAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKS 660
++F+ A+ + S R+ V +Y+ ME +L+ E+ RLS Q S +L++ + H S L A E A +GR Q F FD+ F+ K +++F P + R ++ HL C+ RI+E +AW+S+S
Sbjct: 82 KKFAEAVGQGCAEIGSQRYKLGV-RLYYRVMESMLKSEEERLSVQN---FSKLLNDNIFHTSLLACAVEVVMATYGRNASQSDGTSAETDLSFPWILSVFDLKAFDFYKVIESFIKAEPSLTREMIKHLERCEHRIMESLAWQSRS 223
BLAST of Ggra2022.t1 vs. uniprot
Match: A0A8D3BMS4 (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3BMS4_SCOMX) HSP 1 Score: 69.3 bits (168), Expect = 2.090e-8 Identity = 46/148 (31.08%), Postives = 76/148 (51.35%), Query Frame = 0
Query: 525 RRFSAAL---CTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQV---FAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL 666
+RF A+ C VL + VR+ Y+ ME +L+ E++RLS Q S +L++ H S L A E AA+G + F F+++ F+ K +++F P + + +V HL C+ I+E +AWR+ SPL ++L
Sbjct: 245 QRFGQAVGPRCVVLGEQRFSLGVRQ----YYKVMEAMLKSEEKRLSVQN---FSKLLNDSTFHTSLLACALEVVMAAYGGVSPETDVCFPWILDVFNLAAFDFYKVIESFIKADPTLSKDIVKHLETCENLIMERIAWRTGSPLFELL 385 The following BLAST results are available for this feature:
BLAST of Ggra2022.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra2022.t1 ID=Ggra2022.t1|Name=Ggra2022.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=797bpback to top |