Ggra2001.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2001.t1
Unique NameGgra2001.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length367
Homology
BLAST of Ggra2001.t1 vs. uniprot
Match: A0A2V3J608 (Copine-9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J608_9FLOR)

HSP 1 Score: 662 bits (1707), Expect = 4.800e-239
Identity = 322/366 (87.98%), Postives = 344/366 (93.99%), Query Frame = 0
Query:    1 MSEIMHKSFSEHTLSSVPSVDDDNMSVDSDMTAASNLTVTRTITRLEDFPKHKPPPIGTVLEEETPKPVQLIVEFLGGSTVGSESTRDYIDVLYSEPMEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAISLGHAMCSVWDIVVAPGQCKVMKMDSINQKKDTWVILSGDTKRQRGADRIVNINVKFDKSAKPRAKTFFLLNRALKKARWTPVFRSESHASPNREFKTAVTTFADLFGAEDSKPMRLEFYQKRSAIDPKLIGFVQVSVKQLMQMEEGKVLQWWSGQDGTAPGLVVLAKKEITDEKIDLWFAVTNE 366
            MSEIMHKS SEHTLSSVPSVDDDNMSVDSDMTAASNLTVTRTITRLEDFPKHKPPPIGTVLEEETPKPVQL+VEFLGG+   +++TR+YID LYSEPME+SVECQFLPKIDLFSNTDPFVV++MRDTP D+WR IGRTE+L NCHFPRFV KFSFSALPDQDMDKE+LVKVYGKGSMKKA  LGHAMCSVWDIVVAPGQCKVMKMDSIN+KKDTWVILSGD KR RGADRIVNINVKFDKSAKP+AKTFF+LNRALKKARWTPV+RSESHA+PNREF TA +TFA+LF   +SKPMRLEFYQKRSAIDPKLIGFVQVSVKQL  MEEGKVLQWWSGQDGTAPGLVVLAKKE+T+E IDLW AVTNE
Sbjct:    1 MSEIMHKSISEHTLSSVPSVDDDNMSVDSDMTAASNLTVTRTITRLEDFPKHKPPPIGTVLEEETPKPVQLVVEFLGGAAAATDNTREYIDALYSEPMEISVECQFLPKIDLFSNTDPFVVLHMRDTPRDKWRQIGRTESLVNCHFPRFVNKFSFSALPDQDMDKEILVKVYGKGSMKKASPLGHAMCSVWDIVVAPGQCKVMKMDSINKKKDTWVILSGDLKRSRGADRIVNINVKFDKSAKPKAKTFFMLNRALKKARWTPVYRSESHANPNREFNTATSTFAELFAGSESKPMRLEFYQKRSAIDPKLIGFVQVSVKQLRDMEEGKVLQWWSGQDGTAPGLVVLAKKEMTEESIDLWLAVTNE 366          
BLAST of Ggra2001.t1 vs. uniprot
Match: S0F2V4 (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2V4_CHOCR)

HSP 1 Score: 635 bits (1638), Expect = 1.620e-228
Identity = 309/367 (84.20%), Postives = 340/367 (92.64%), Query Frame = 0
Query:    1 MSEIMHKSFSEHTLSSVPSVDDD-NMSVDSDMTAASNLTVTRTITRLEDFPKHKPPPIGTVLEEETPKPVQLIVEFLGGSTVGSESTRDYIDVLYSEPMEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAISLGHAMCSVWDIVVAPGQCKVMKMDSINQKKDTWVILSGDTKRQRGADRIVNINVKFDKSAKPRAKTFFLLNRALKKARWTPVFRSESHASPNREFKTAVTTFADLFGAEDSKPMRLEFYQKRSAIDPKLIGFVQVSVKQLMQMEEGKVLQWWSGQDGTAPGLVVLAKKEITDEKIDLWFAVTNE 366
            MS+IMH S S+ T SS PS+DDD NMSV SDM+AASNLTVTRTITRLEDFP+H+PPPIGTVLEEETPKPVQL+VEFLGG+   S++TRDYID LYSEPMEVSVECQFLPKID+FSNTDPFVV++MRDTP D WR +G+TEALTN HFPRFVTKF+F+ALPDQDMDKELLVKVYGKGSMKK+I LGHAMCS+WD+V APGQCKVMKMDSINQKK+TWVILSGDTKR +GADR+VNINVKFDKS KP+AKTFFLLNR+LKKARWTPV+RSESH SPNREFKTA T+FADLF  E+SKPMRLEFYQKRSAIDPKLIGFVQVS+KQL  MEEGKVLQWWSGQ G+APGLVVLAKKEIT+E IDLWFAVTNE
Sbjct:    1 MSDIMHTSISQQTFSSAPSLDDDDNMSVASDMSAASNLTVTRTITRLEDFPRHRPPPIGTVLEEETPKPVQLVVEFLGGAAATSDNTRDYIDALYSEPMEVSVECQFLPKIDMFSNTDPFVVLHMRDTPRDPWRQLGKTEALTNYHFPRFVTKFAFTALPDQDMDKELLVKVYGKGSMKKSIPLGHAMCSIWDVVCAPGQCKVMKMDSINQKKETWVILSGDTKRTQGADRVVNINVKFDKSVKPKAKTFFLLNRSLKKARWTPVYRSESHGSPNREFKTATTSFADLFRGEESKPMRLEFYQKRSAIDPKLIGFVQVSIKQLHAMEEGKVLQWWSGQGGSAPGLVVLAKKEITEESIDLWFAVTNE 367          
BLAST of Ggra2001.t1 vs. uniprot
Match: A0A1X6P094 (C2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P094_PORUM)

HSP 1 Score: 422 bits (1086), Expect = 1.370e-144
Identity = 196/337 (58.16%), Postives = 263/337 (78.04%), Query Frame = 0
Query:   30 DMTAASNLTVTRTITRLEDFPKHKPPPIGTVLEEETPKPVQLIVEFLGGSTVGSESTRDYIDVLYSEPMEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAISLGHAMCSVWDIVVAPGQCKVMKMDSINQKKDTWVILSGDTKRQRGADRIVNINVKFDKSAKPRAKTFFLLNRALKKARWTPVFRSESHASPNREFKTAVTTFADLFGAEDSKPMRLEFYQKRSAIDPKLIGFVQVSVKQLMQMEEGKVLQWWSGQDGTAPGLVVLAKKEITDEKIDLWFAVTNE 366
            D+TA  ++ +TRT+TRLED P  + P +GTVLEEE PKPVQL++EF+G     SES R Y+D LY++PME+S+ECQFLPK D+FSN+DPF V+ +R+     W  +GRTE L N HFPRFV KF F   P++DMD+ELLVKVYGKG MKK + +    C++WDIV+A GQCKV+K+DSIN+ KD+W+ILSGD  R  GA+R VN+ V++D+SAKP+AKTFF+LNR LKKARWTPV+RSE   +  ++FK A  + A+LF  +D+K MRLE YQ R ++DPKL+GFVQ+S+KQL  MEEG+VL W+ GQ+G APGLV+LAK+E+++E++ +W  +TN+
Sbjct:   28 DLTADKHV-LTRTVTRLEDIPAGETPAVGTVLEEEAPKPVQLMIEFIGTGG-NSESIRQYVDALYTQPMEISIECQFLPKTDIFSNSDPFCVVLIRENERSPWAELGRTETLVNTHFPRFVKKFVFPCNPERDMDRELLVKVYGKGGMKKQVHMAQGQCTLWDIVIAAGQCKVVKLDSINRHKDSWLILSGDVVRPLGAERPVNVYVRYDRSAKPKAKTFFVLNRGLKKARWTPVYRSEPLRAGGQDFKPARVSSAELFAGDDAKHMRLEVYQHRPSVDPKLMGFVQLSIKQLTTMEEGRVLHWFCGQEGRAPGLVLLAKREVSEEEVSVWILITND 362          
BLAST of Ggra2001.t1 vs. uniprot
Match: A0A6A7G833 (Copine-8-like isoform X2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G833_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 2.500e-10
Identity = 67/264 (25.38%), Postives = 124/264 (46.97%), Query Frame = 0
Query:   90 IDVLYSEPMEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAIS----LGHAMCSVWDIVVAPGQC-------KVMKMDSINQKKDTWVILSGDTKRQRGADRI-----------VNINVKFDKSAKPRAKTFFLLNRALKKARWTPVFRSES---HASPN-REFKTAVTTFADLFGAEDSKPMRLEFYQKRSAIDPKLIGFVQVSVKQLMQMEE 327
            +D   S P+E+ + C+ LPK+D+ S +DPFVV+Y R+     +  IGRTE + +CH P FV +F        +M++     VY   S  + ++    +G    S+ +++ APGQ        K  K+    +KK   + +  + +R    D++           +++   F  S+    + F    R+ +   W  V R+E+   + +PN + F   V T   L   +  +P+++  Y      DP  IG +Q ++++L+  E+
Sbjct:   10 VDQELSHPIELYLSCRELPKLDVLSKSDPFVVVYERNEK-GVFDEIGRTETIQDCHDPNFVKQFLIDY--HFEMNQVFRFDVYDSDSKSENLAKHDFIGTVSKSLSELITAPGQTITTSLLSKRGKIVKPQRKKYPRLTIKCE-ERSENLDQVTFNFSGHNLAAMDVGCCFMGSSDGYLEFF----RSREDGSWISVHRTETIMRNLNPNWKSFSLKVQT---LCNGDFDRPLKIICYDWDYNSDPDTIGQIQTTLRELIATED 262          
BLAST of Ggra2001.t1 vs. uniprot
Match: A0A7S3ACW3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ACW3_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 1.530e-9
Identity = 56/213 (26.29%), Postives = 106/213 (49.77%), Query Frame = 0
Query:   98 MEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAISL------GHAMCSVWDIVVAPGQCKVMKMDSI-NQKKDTWVILSGDTKRQRGADRIVNINVKFDKSAKPR-AKTFFLLNRALKKARWTPVFRSES-HASPNREFKTAVTTFADLFGAEDSKPMRLEFY 301
            +EVSV  + LPK+D+FS T+PFVV++  +     W+ +GRTE + +   PRFV KF   A   +++   +L   +   + K    L      G   C + +++    Q   +++ +  N+ +  + I+ G+  RQ    R +  N +F +      ++ ++ ++R++   RW  V RSE+       +F+ +V    +L  A + K +RLE +
Sbjct:    7 LEVSVLARGLPKLDMFSRTNPFVVVFKSEGGGGVWKEVGRTETIADEQDPRFVEKF-LVAFTLRNVRSIVLRFDFFSRTSKNTNDLSAHNFVGTVQCQLAELIETLDQGMALRLQTKQNRTEVAFGIIQGELFRQLENPRGIIFNAEFGRIFHVAGSRAYYEISRSIGPRRWALVHRSETIRLGKTSKFEHSVLDEQELT-AGNQKHLRLEVF 217          
BLAST of Ggra2001.t1 vs. uniprot
Match: A0A1Y1XY38 (C2 domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XY38_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 2.410e-8
Identity = 54/181 (29.83%), Postives = 83/181 (45.86%), Query Frame = 0
Query:   98 MEVSVECQFLPKIDLFSNTDPFVVMYMR-DTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQ------DMDKELLVKVYGKGSMKKAISLGHAMCSVWDIVVAPGQCKVMKMDSINQKKDTWVILSGDTK--RQRGADRIVNINVKF--DKSAKPRAKTFFLLNRALKKARWTPVFRS 267
            +E+ VECQ LPK+D FS +DP V+M +R D P + W   GRTE + +   PRF   F       Q      D+D E         +M++   +G    S+ DI++  G  +++    IN ++D     SG+     +  AD    +  +F  +      A  FF + R  K  R   V+RS
Sbjct:   10 LELRVECQMLPKLDFFSESDPVVIMSLRSDEPPNLWLEFGRTEVIQDTPNPRFTKCFVLRGKETQLRFDAFDIDNE-------SDNMEEQDYIGFLETSLEDILLTKG--RILTQPLINPERD----FSGEITLIAEEMADTPEKVTFRFAAESIEVNHASYFFEIYRRRKDGRSVVVYRS 177          
BLAST of Ggra2001.t1 vs. uniprot
Match: copine-8-like isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87AA8 (copine-8-like isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87AA8)

HSP 1 Score: 65.9 bits (159), Expect = 4.340e-8
Identity = 60/256 (23.44%), Postives = 118/256 (46.09%), Query Frame = 0
Query:   93 LYSEPMEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAIS----LGHAMCSVWDIVVAPGQCKV----MKMDSINQKKDTWVILSGDTKRQRGADRIV----NINVKFDKSAKPR------AKTFFLLNRALKKARWTPVFRSES-HASPNREFKTAVTTFADLFGAEDSKPMRLEFYQKRSAIDPKLIGFVQVSVKQLMQMEEGK 329
            L +  +E+++ C+ L  +D+FS +DP VV+Y +     +W    RTE + NCH P F  K   S   ++   + LL KV+   S    ++    LG A C++   V++ G+ ++       +S+++  + ++ILS        A+ +V    N+ ++F      R      +  F L ++A++   + PV ++E    + N E+K        L   +  + +++  Y    + +   IG    ++K L +   GK
Sbjct:   11 LPTSEVEMTISCRSLLGMDVFSKSDPMVVVYNQPFGERRWVEFFRTETIMNCHDPEFTKKLVLSYHFEEQ--QHLLFKVFDVDSSSSNLANHDFLGMATCTLGQ-VISRGKVQLPLSMSSNESMSRHSNGFIILS--------AEELVAVRDNVILQFRGRKLDRMDFFGKSDPFLLFSKAMETGEFNPVHKTEVIKITLNPEWKKFTIPIRTLCNGDMDRTIKIACYDWNRSGNHSFIGEFDTTLKDLSEGPGGK 255          
BLAST of Ggra2001.t1 vs. uniprot
Match: copine-8-like isoform X1 n=4 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4B6C (copine-8-like isoform X1 n=4 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4B6C)

HSP 1 Score: 62.4 bits (150), Expect = 5.710e-7
Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   95 SEPMEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAIS----LGHAMCSVWDIVVA 196
            S  +E+S+ C+ L   D+FS +DP VVM+  D    QWR  GRTE + N   P FV KF      +Q   ++L ++VY   S    +S    LG   C++ +IV A
Sbjct:   18 SSVVEISLSCRNLIDADVFSKSDPMVVMFTMDQGTRQWREFGRTEVIWNNLNPDFVKKFVMHYYFEQS--QKLKLEVYDIDSPSADLSKHDFLGRMECTLGEIVAA 121          
BLAST of Ggra2001.t1 vs. uniprot
Match: copine-8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193ADA05 (copine-8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193ADA05)

HSP 1 Score: 62.0 bits (149), Expect = 7.700e-7
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   98 MEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMK--KAISLGHAMCSVWDIVVAPG 198
            +E+++ C+ L   D+FS +DP VVMY++     +WR  GRTE + N   P FVTKF      ++       V      S K  K   LG   C++ +IV +PG
Sbjct:   45 VELAISCRGLIDADVFSKSDPMVVMYIQGLGTKEWREYGRTETIQNTLNPDFVTKFVIDYFFEERQALRFDVFDIDSKSAKLTKHDFLGQVFCTLGEIVGSPG 147          
BLAST of Ggra2001.t1 vs. uniprot
Match: H2YHH5 (Uncharacterized protein n=2 Tax=Ciona savignyi TaxID=51511 RepID=H2YHH5_CIOSA)

HSP 1 Score: 60.5 bits (145), Expect = 2.540e-6
Identity = 37/105 (35.24%), Postives = 53/105 (50.48%), Query Frame = 0
Query:   98 MEVSVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFVTKFSFSALPDQDMDKELLVKVYGKGSMKKAIS----LGHAMCSVWDIVVAPG 198
            +E+ V C+ L   DLFS +DP VVMY +     +WR  GRTE + N   P FV KF      ++   + +   VY   S    +S    LG A CS+ ++V + G
Sbjct:   26 IELGVSCRNLIDADLFSKSDPMVVMYTQGLGSKEWREFGRTETIWNNLNPDFVKKFIIDYFFEER--QAMRFDVYDVDSKSPDLSKHDFLGQAFCSLGEVVGSSG 128          
The following BLAST results are available for this feature:
BLAST of Ggra2001.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3J6084.800e-23987.98Copine-9 n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
S0F2V41.620e-22884.20C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1X6P0941.370e-14458.16C2 domain-containing protein n=1 Tax=Porphyra umbi... [more]
A0A6A7G8332.500e-1025.38Copine-8-like isoform X2 (Fragment) n=1 Tax=Hirond... [more]
A0A7S3ACW31.530e-926.29Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1Y1XY382.410e-829.83C2 domain-containing protein n=1 Tax=Basidiobolus ... [more]
copine-8-like isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87AA84.340e-823.44copine-8-like isoform X1 n=2 Tax=Ischnura elegans ... [more]
copine-8-like isoform X1 n=4 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4B6C5.710e-736.79copine-8-like isoform X1 n=4 Tax=Mercenaria mercen... [more]
copine-8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193ADA057.700e-734.95copine-8-like n=1 Tax=Styela clava TaxID=7725 RepI... [more]
H2YHH52.540e-635.24Uncharacterized protein n=2 Tax=Ciona savignyi Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 98..238
e-value: 2.0E-10
score: 42.5
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 102..203
IPR000008C2 domainPFAMPF00168C2coord: 102..191
e-value: 4.5E-7
score: 30.1
IPR000008C2 domainPROSITEPS50004C2coord: 75..203
score: 11.245491
NoneNo IPR availablePANTHERPTHR10857:SF106COPINE-8coord: 97..327
IPR045052CopinePANTHERPTHR10857COPINEcoord: 97..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000925_piloncontigtig00000925_pilon:119516..120616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2001.t1Ggra2001.t1Gracilaria gracilis GNS1m malemRNAtig00000925_pilon 119516..120616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2001.t1 ID=Ggra2001.t1|Name=Ggra2001.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=367bp
MSEIMHKSFSEHTLSSVPSVDDDNMSVDSDMTAASNLTVTRTITRLEDFP
KHKPPPIGTVLEEETPKPVQLIVEFLGGSTVGSESTRDYIDVLYSEPMEV
SVECQFLPKIDLFSNTDPFVVMYMRDTPHDQWRHIGRTEALTNCHFPRFV
TKFSFSALPDQDMDKELLVKVYGKGSMKKAISLGHAMCSVWDIVVAPGQC
KVMKMDSINQKKDTWVILSGDTKRQRGADRIVNINVKFDKSAKPRAKTFF
LLNRALKKARWTPVFRSESHASPNREFKTAVTTFADLFGAEDSKPMRLEF
YQKRSAIDPKLIGFVQVSVKQLMQMEEGKVLQWWSGQDGTAPGLVVLAKK
EITDEKIDLWFAVTNE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom
IPR045052Copine