Ggra1819.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1819.t1
Unique NameGgra1819.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length640
Homology
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A2V3IWI4 (ATP-dependent RNA helicase DEAH11, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI4_9FLOR)

HSP 1 Score: 464 bits (1193), Expect = 6.400e-155
Identity = 223/431 (51.74%), Postives = 291/431 (67.52%), Query Frame = 0
Query:    1 MAAPDTDYLLALRMQLQENGAGDFNASDMLGLDTHSHLSQDTLSSLALAQSLEASKELVVQDCQFARSLAASQHGLKPDDCSAQPEPEEILEKEGNIV--QCEICFDDFLPHLLFASNECKHHFCFPCMVQYLQMVIQRGHPYPITCPSCRTVLENQTCLKALSGTGKDYEALERLIINKDHTKRIRYCSNSKCAMPFDWVVDDAGAQNVAQIARVLCPFCDTETCAICRCVWHDDETCEEHAIKQDLESLALLTQRNKWTRCPDCGHLIEKRNGDCNFVRCTCGCGFCHSCGAAYMTLESTSDNVHGMPGCRCSLFPPVEAE----------QRFQPPEQARQ-----PPQRLRPEQVFHVN-----EPQLLVPMPHVHQGVVGPNGAVNVVKCLEGDQREMGGALPREMLMDMRVNECPYEDCGLRFRS 409
            M+   +DYL+AL++QLQENGA DFN+  +L  ++   LS      L LA +LEA+   +V+D   AR++AA ++GL P D   Q + +    K       +C+ICF+ F+P++ F S  C H FCF CM QYL++V+QRGHPYPI CPSCR ++ N+ CL ALSGTGK+YEALERLIINKD TKRIRYC+NSKCAMPFDWV D+AGA +V + ARV+CPFCDTETCA+CRCVWH+D+TCEEH++++D+E L++L+++N W RCPDCGHLIEKR GDC FV C CGCGFCH+CG+AY +L+ T DNVHG PGCRC+LFP  E                P   AR+     P   + PE    V         ++ P    H G+ GPNG VN+  CLEG  + MG  LP+ M+  +    CPYE+C ++FRS
Sbjct:    1 MSTAASDYLVALKLQLQENGADDFNSLHVLSTNSDESLSYHPNQDLVLAYTLEAANRRIVEDYALARAIAAKENGL-PVDVEDQNKHQLSSTKNAKHATSECQICFEAFVPNMTFNSGTCDHTFCFSCMSQYLKLVVQRGHPYPINCPSCRVIIPNEKCLSALSGTGKEYEALERLIINKDFTKRIRYCANSKCAMPFDWVFDNAGAHDVREQARVMCPFCDTETCALCRCVWHEDQTCEEHSLQKDMEELSVLSRQNNWRRCPDCGHLIEKRTGDCAFVTCKCGCGFCHTCGSAYTSLDPTWDNVHGRPGCRCALFPEPEEXXXXXXXALPVDNILPRRIARRLNIIAPENDVVPEDAVDVPVRANARANVIAPERIYHDGLWGPNGRVNLRLCLEGRHQFMGAPLPQAMIQSLENWTCPYEECEVKFRS 430          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A2V3IHM6 (Radical S-adenosyl methionine domain-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHM6_9FLOR)

HSP 1 Score: 366 bits (940), Expect = 2.490e-120
Identity = 183/245 (74.69%), Postives = 198/245 (80.82%), Query Frame = 0
Query:  426 MLRRARTEKINFAGGEPFLQPHMLGELCKTTHEL--------------------------------DSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRERN 638
            MLR AR EKINFAGGEPFL   MLGELCKT+HEL                                DSF+P TNAAIGRGGDA+NKHVD ILRVR+QCAKHNI FKMNTVVCSLNW+EDM ++VRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVS++QYQSFVFRHS IE L+AEPNNVMRNSYL+LDE+LRFLDCSGGGKVPSASILDVGVYKAL  SGFDQ MF+ERGGVYDW R+R+
Sbjct:    1 MLRDARIEKINFAGGEPFLHREMLGELCKTSHELGMTVSIISNGSLITPKWMKQYGFYVDILGVSVDSFNPATNAAIGRGGDAHNKHVDHILRVRDQCAKHNITFKMNTVVCSLNWEEDMNEHVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSNQQYQSFVFRHSDIEVLVAEPNNVMRNSYLILDEQLRFLDCSGGGKVPSASILDVGVYKALECSGFDQTMFNERGGVYDWTRDRD 245          
BLAST of Ggra1819.t1 vs. uniprot
Match: K0RST8 (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RST8_THAOC)

HSP 1 Score: 288 bits (736), Expect = 1.360e-88
Identity = 148/265 (55.85%), Postives = 185/265 (69.81%), Query Frame = 0
Query:  408 RSKNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLGELCKTTHE---------------------------------LDSFDPKTNAAIGRGGDAN-NKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRERN 638
            R  N N L L +A LGL++LR+A TEKINFAGGEPF+ P +LGELC+  +E                                 +DSFDP TNAAIGRG D++ N HV+R+LRVR+ CA+H ++FKMNTVVC  N  EDM +YV +LDP RWK FQVL+L  EN+G  G+LRDAR LVV+  ++ +F+ RHS    LIAE N+VM+NSYLLLDEELRFLDCS  GKVPS SILDVGV  ALAQ+GFD +MF +RGG+++W+R+RN
Sbjct:   49 RVLNTNKLGLGKAMLGLQLLRQAGTEKINFAGGEPFMNPELLGELCRHANEDLGMAVSIISNGSLITRDWMDRFGPFVDILGISVDSFDPATNAAIGRGEDSDRNHHVNRMLRVRDLCAQHEVLFKMNTVVCKFNHDEDMNEYVTRLDPYRWKCFQVLLLNGENAG-GGDLRDARDLVVTRDEFDAFITRHSSQPMLIAEANDVMQNSYLLLDEELRFLDCSDNGKVPSRSILDVGVENALAQAGFDDSMFHKRGGIFEWRRDRN 312          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A7S0AD33 (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AD33_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.130e-88
Identity = 147/277 (53.07%), Postives = 187/277 (67.51%), Query Frame = 0
Query:  397 ECPYEDCGLRFRS-KNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLGELCKTTHE---------------------------------LDSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRERNE 639
            +C Y  C   F + K  + LS ++A  GLR+L +A  EKINFAGGEPFL P +LGELC+   +                                 +DSFD  TNAAIGRGGDA N HV R+LRVR++C+KHN+ FK+NTVV +LNW+EDM + +  LDP RWKVFQVL+L+ EN G  G+LRDAR L +   ++ +FV RH+  +QLI EPN+VM+NSYLLLDEE+RFLDCSGGGKVP  SILDVGV +AL  +GFD  MF ERGG+++W+R R+E
Sbjct:    4 KCNYS-CEFCFHTAKTYHALSTEEAANGLRVLAKAGCEKINFAGGEPFLHPILLGELCRVASDELGLGVSIISNGSKITPEWMDMYAQYVDVLGVSVDSFDKATNAAIGRGGDAENGHVKRMLRVRDECSKHNVRFKLNTVVNALNWKEDMNEQIVALDPYRWKVFQVLLLEGENVGGDGDLRDARHLCIDRSKFDAFVKRHADRKQLIPEPNDVMQNSYLLLDEEMRFLDCSGGGKVPGRSILDVGVDEALMDAGFDDEMFAERGGIFEWRRPRDE 279          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A448Z0Q5 (Radical SAM core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0Q5_9STRA)

HSP 1 Score: 282 bits (721), Expect = 4.930e-85
Identity = 151/278 (54.32%), Postives = 188/278 (67.63%), Query Frame = 0
Query:  397 ECPYEDCGLRFRS-KNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLGELCKTTHEL--------------------------------DSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHS---GIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRERN 638
            +C Y  C   F + K  + L  + A  GL +LR A TEKINFAGGEPF++PH+LG LCK  HE+                                DSFDP+TNA IGRGGDA+N+HVDR+ RVR  C +HNI FK+NTVVC  N +EDMT  + +LDP+RWKVFQVL+L+ EN+G  G+LRDAR L V+D +YQ+FV RH      + LI E N VM+NSYLLLDE+LRFLDCS GGKVPSASIL+VGV  AL Q+GFD +MF +RGGV++W R+R+
Sbjct:  143 KCNYS-CKFCFHTQKTTHTLPAEDAVRGLCLLRAAGTEKINFAGGEPFVRPHLLGRLCKAAHEMGMAVSIISNGSLVTEEWMRQYGYYVDILGVSVDSFDPETNALIGRGGDAHNRHVDRMRRVRRWCEEHNIKFKINTVVCKHNVREDMTQQMLELDPVRWKVFQVLVLEGENAGA-GDLRDARELRVTDDEYQAFVDRHRPSFSSDVLIPESNAVMQNSYLLLDEDLRFLDCSAGGKVPSASILEVGVETALRQAGFDADMFRQRGGVFEWTRDRS 418          
BLAST of Ggra1819.t1 vs. uniprot
Match: D6X1B3 (Radical S-adenosyl methionine domain-containing protein 2-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=D6X1B3_TRICA)

HSP 1 Score: 227 bits (579), Expect = 1.920e-65
Identity = 126/279 (45.16%), Postives = 171/279 (61.29%), Query Frame = 0
Query:  395 VNECPYEDCGLRFRS-KNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFL--QPHMLGEL---CKTTHEL-------------------------------DSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRE 636
              +C YE CG  F + K   VL LD A+ GLRML+ A  EKINF+GGEPF+  +   LGE+   CK   +L                               DSF+ +TN  IGRG  + N H+++IL+VR  C K+N++FK+NTVV + N  EDM + V +++P+RWKVFQ L+L+ EN+G P  LR+A    + D  ++SF+ RH  I+ L+ E N  M+NSYL+LDE +RFLDC+ G KVPS SILD+GV  AL  SGFD++MF +RGG Y W +E
Sbjct:   48 TRQCNYE-CGFCFHTAKTSFVLDLDVAKKGLRMLKEAGMEKINFSGGEPFIVKRGRYLGEMVKFCKMALKLPSVSIVSNGSLITEKWFQSYGKYVDIMAVSCDSFNEETNKLIGRGQGSKN-HLEQILKVRNWCEKYNVLFKLNTVVNTYNQNEDMCEQVSRINPIRWKVFQCLLLEGENAG-PEALRNAERFYIDDATFESFLQRHESIKSLVPESNTKMQNSYLILDEYMRFLDCTSGSKVPSKSILDIGVENALKFSGFDEDMFKKRGGFYKWSKE 323          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A1I8HT43 (Elp3 domain-containing protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HT43_9PLAT)

HSP 1 Score: 228 bits (580), Expect = 3.590e-65
Identity = 131/303 (43.23%), Postives = 178/303 (58.75%), Query Frame = 0
Query:  375 EGDQREMGGALPREMLMDMRVN-----ECPYEDCGLRFRSKNDN-VLSLDQARLGLRMLRRARTEKINFAGGEPFLQPH--MLGEL---CKTTHEL-------------------------------DSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKR 635
            E ++    GA P E ++ + VN      C Y+ CG  F +   + VL L++A+ GLRML+ A  +K+NF+GGEPFL+    +LGE+   CK T  L                               DSFD  TN AIGR    ++ H+D++ ++ E CA++ + FK+NTVV + NWQEDM D +  L+P RWKVFQ L++  EN G    LR A   VV+D Q++SF+ RHS +E L+ E N  MR+SYL+LDE +RFLDC+ G K PS SILDVGV  A+  SGFD+ MF  RGGVY W +
Sbjct:   57 EAEKPRAAGAAPPESVVPVSVNYHFTRRCNYK-CGFCFHTAISSFVLPLEEAKRGLRMLQEAGMQKVNFSGGEPFLEQRGRLLGEMVRFCKETLGLPSVSIVSNGSLITEEWFQTYGEWLDILAVSCDSFDEATNRAIGRHAPRSH-HLDKLYQISEWCARYRVAFKINTVVNTHNWQEDMADQILDLNPCRWKVFQCLLIGGENCG-EDSLRHAETFVVTDEQFRSFLDRHSRVECLVPESNEKMRDSYLILDERMRFLDCTRGRKEPSRSILDVGVANAICSSGFDEAMFRRRGGVYQWSK 356          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A7S1CTU3 (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTU3_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.150e-64
Identity = 122/234 (52.14%), Postives = 148/234 (63.25%), Query Frame = 0
Query:  397 ECPYEDCGLRFRS-KNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLGELCKTTHE---------------------------------LDSFDPKTNAAIGRG-GDAN-NKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDC 594
            EC Y+ C   F + KN N L +  A+LGL++L+ + TEKINFAGGEPFL P +LGELC+  H                                  +DSFDP TNA IGRG GD   N+HV R+L+VRE CA+H I+FKMNTVVCSLN  EDM +YV  LDP RWK FQ LIL+ EN+G   +L DAR L V+  ++ +F+ RHS    LI EPN VM+NSYLLLDEELRFLDC
Sbjct:   45 ECNYK-CKFCFHTQKNTNKLGIGNAKLGLQLLQHSGTEKINFAGGEPFLNPQVLGELCQFAHSECGMAVSIISNGSLIKSEWMDRYGQYVDILGVSVDSFDPATNALIGRGTGDTTKNQHVSRVLKVRELCAQHGILFKMNTVVCSLNHHEDMNEYVTTLDPYRWKAFQCLILQGENAGGVNDLNDARELQVTREEFDAFIQRHSDQSALIPEPNTVMQNSYLLLDEELRFLDC 277          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A5B1QUT8 (Radical SAM enzyme n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QUT8_9AGAM)

HSP 1 Score: 223 bits (567), Expect = 8.300e-64
Identity = 119/281 (42.35%), Postives = 165/281 (58.72%), Query Frame = 0
Query:  395 VNECPYEDCGLRFR-----SKNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLGEL---CKTTHEL-------------------------------DSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLP-GELRDARPLVVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKR 635
            VN  P+  C    +     +KN ++L LD+A+ GLR+L  A  +K+N +GGEPFL+P  +GE+   CK    L                               DSFDP TN  +GR    + +HV R+ +V E C +  I  K+N+V+   N++EDM   + ++ P RWKVFQVL+L  EN+G   G LRDAR LV+SD Q++SF+ RH   + L+ E N  M++SYL LDE++RFL+C GGGKVP  S+L+VGV  AL ++GFD N F  RGGV+DW R
Sbjct:   30 VNYFPHRKCNYACKFCFHTTKNLDILPLDEAKRGLRLLAEAGMKKLNISGGEPFLKPDFIGEVFRFCKEELHLESCTVVNNGSKVTEQWLDKYGRYLDVMAISCDSFDPDTNVDLGRAEKGSGRHVRRVFQVAEWCRERGIKVKINSVITRRNFEEDMNPGIEEIAPFRWKVFQVLLLDGENTGSESGSLRDARDLVISDEQFRSFLDRHKRQKCLVPEDNEAMKDSYLNLDEQMRFLNCQGGGKVPGRSLLNVGVPAALKEAGFDNNAFINRGGVFDWSR 310          
BLAST of Ggra1819.t1 vs. uniprot
Match: A0A4S8MKK9 (Radical SAM enzyme n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MKK9_DENBC)

HSP 1 Score: 222 bits (565), Expect = 1.720e-63
Identity = 120/292 (41.10%), Postives = 164/292 (56.16%), Query Frame = 0
Query:  386 PREMLMDMRVNECPYEDCGLR-----FRSKNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLGELCKTTHE----------------------------------LDSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKMNTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLP-GELRDARPLVVSDRQYQSFVFRHSGI-EQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKVPSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRE 636
            P + L+ + VN  P+  C          SKN  +L LD A+ GLRML  A  +K+N +GGEPFLQPH +GE+ K   E                                   DSF P+TN   GR  +    H+ ++  V E C    I  K+NTVV   NW+E M   +++L P RWKVFQVL+L  EN+G   G LRDAR LV++  Q+Q+F+ RH  + ++L+ E N  MR+SYL LDE++RFL+C  GGK P  S+L+VGV +A+  +GFD+  F  RGGV+DWKR+
Sbjct:   23 PEQKLVPLSVNYFPHRKCNYSCDFCFHTSKNLKILPLDSAKHGLRMLADAGMKKLNISGGEPFLQPHFIGEVFKFCKEELGLESCSVVNNGSKVTEKWLDTYGQYLDVMAISCDSFVPETNVLQGRAENGRPGHIQKVFEVAEWCRCRGIKVKINTVVTIHNWEESMAQSIQELAPFRWKVFQVLLLDSENTGKETGSLRDARNLVITSEQFQAFLDRHKELGDRLVPESNEAMRDSYLNLDEDMRFLNCQDGGKTPGRSLLEVGVQEAMKDAGFDEEQFFGRGGVFDWKRD 314          
The following BLAST results are available for this feature:
BLAST of Ggra1819.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWI46.400e-15551.74ATP-dependent RNA helicase DEAH11, chloroplastic n... [more]
A0A2V3IHM62.490e-12074.69Radical S-adenosyl methionine domain-containing pr... [more]
K0RST81.360e-8855.85Radical SAM core domain-containing protein (Fragme... [more]
A0A7S0AD332.130e-8853.07Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A448Z0Q54.930e-8554.32Radical SAM core domain-containing protein n=1 Tax... [more]
D6X1B31.920e-6545.16Radical S-adenosyl methionine domain-containing pr... [more]
A0A1I8HT433.590e-6543.23Elp3 domain-containing protein n=3 Tax=Macrostomum... [more]
A0A7S1CTU31.150e-6452.14Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A5B1QUT88.300e-6442.35Radical SAM enzyme n=1 Tax=Dentipellis sp. KUC8613... [more]
A0A4S8MKK91.720e-6341.10Radical SAM enzyme n=1 Tax=Dendrothele bispora (st... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 169..237
e-value: 0.1
score: 12.9
coord: 240..310
e-value: 0.02
score: 20.6
IPR002867IBR domainPFAMPF01485IBRcoord: 178..237
e-value: 2.4E-6
score: 27.6
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 100..148
e-value: 4.6E-5
score: 23.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 95..184
e-value: 2.1E-13
score: 52.0
NoneNo IPR availableGENE3D1.20.120.1750coord: 235..347
e-value: 1.9E-10
score: 43.0
NoneNo IPR availablePANTHERPTHR21339RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 2coord: 459..636
coord: 397..455
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 95..176
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 244..296
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 403..533
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 118..127
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 100..149
score: 11.456568
IPR044066TRIAD supradomainPROSITEPS51873TRIADcoord: 96..316
score: 18.87026

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:753129..756660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1819.t1Ggra1819.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 753129..756660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1819.t1 ID=Ggra1819.t1|Name=Ggra1819.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=640bp
MAAPDTDYLLALRMQLQENGAGDFNASDMLGLDTHSHLSQDTLSSLALAQ
SLEASKELVVQDCQFARSLAASQHGLKPDDCSAQPEPEEILEKEGNIVQC
EICFDDFLPHLLFASNECKHHFCFPCMVQYLQMVIQRGHPYPITCPSCRT
VLENQTCLKALSGTGKDYEALERLIINKDHTKRIRYCSNSKCAMPFDWVV
DDAGAQNVAQIARVLCPFCDTETCAICRCVWHDDETCEEHAIKQDLESLA
LLTQRNKWTRCPDCGHLIEKRNGDCNFVRCTCGCGFCHSCGAAYMTLEST
SDNVHGMPGCRCSLFPPVEAEQRFQPPEQARQPPQRLRPEQVFHVNEPQL
LVPMPHVHQGVVGPNGAVNVVKCLEGDQREMGGALPREMLMDMRVNECPY
EDCGLRFRSKNDNVLSLDQARLGLRMLRRARTEKINFAGGEPFLQPHMLG
ELCKTTHELDSFDPKTNAAIGRGGDANNKHVDRILRVREQCAKHNIMFKM
NTVVCSLNWQEDMTDYVRKLDPMRWKVFQVLILKDENSGLPGELRDARPL
VVSDRQYQSFVFRHSGIEQLIAEPNNVMRNSYLLLDEELRFLDCSGGGKV
PSASILDVGVYKALAQSGFDQNMFDERGGVYDWKRERNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002867IBR_dom
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
IPR044066TRIAD_supradom