Ggra1812.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1812.t1 vs. uniprot
Match: A0A2V3IWI1 (PH_TFIIH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI1_9FLOR) HSP 1 Score: 631 bits (1627), Expect = 2.690e-225 Identity = 311/413 (75.30%), Postives = 360/413 (87.17%), Query Frame = 0
Query: 1 MADFEIERRCSFEKRPGIVQLSATNLVWTPDSAADGREQRVPFTAISQFQVSKEGSAKKAMIRLTCSDRSNKITLDFGASFTDRDAVRDVLNRLQSAPAFAPPVVQQPPKKPLSEKQKLWRTSLLQRKEVRQMHQRLVLTRAVTEDTFWKGMKFRYTPKGELKNPNEPLEHADELNDAGVPSDAFTATNSCDDLKWDTIPSPAQRHQIFLAHPALKRTFLHKKVSFDDENMWALFSASSMAPRSARLKSKSDSVRAGAADAFFAPFQAKEAERAIQDREESVHNLHATLAIDRFDDHRTEHIHDPHPEKRVRVSDALRLMRMVNVHGGMIVGDGWKDSGERPLEDLVDEPEKSFAPLAVRENAPKLETAAIDSNVAVAFSDAMRLWRADVARFSEPIATSGDVLRKLIESMRP 413
M++FEIERRCSFEKRPGIV LSAT+LVWTP+SAADGRE RVPFTAISQFQVSKEGSAKKAMIRLTCSDR NKITLDF SFTDRDAVRD+LNRLQSAPA APP + PP +PL+ +Q+LWRT+LL+RK+VRQMHQRLVL+RAV+ED FWKGMKFRYTPK E +NP EPLEHAD L++ GVPSDAFT + SCDDLKWDT+P+PAQRH IFLA PA+KR FL + +FDD ++WALFSASSMAPRSAR++SK D+VRAG ADAFFAP+QA+EAERA ++RE+SV NLH+ +AI+RFDDHRTEH+ DPHP KR RVSDALRLMRMVN HG MIVG+GWKD+ ERPLEDLVD+P + F LAV+E+A K E AID +A+AFSDAM W ADVARFSEPI TSG +L KL++SMRP
Sbjct: 1 MSEFEIERRCSFEKRPGIVHLSATHLVWTPNSAADGRELRVPFTAISQFQVSKEGSAKKAMIRLTCSDRPNKITLDFATSFTDRDAVRDLLNRLQSAPAPAPPPIHAPPAQPLTARQRLWRTALLKRKDVRQMHQRLVLSRAVSEDVFWKGMKFRYTPKAEPRNPTEPLEHADLLHETGVPSDAFTPSPSCDDLKWDTVPTPAQRHHIFLAFPAVKRAFLQRNATFDDHHLWALFSASSMAPRSARVRSKRDTVRAGEADAFFAPYQAREAERAQKEREQSVRNLHSDIAINRFDDHRTEHVQDPHPPKRARVSDALRLMRMVNTHGSMIVGEGWKDTLERPLEDLVDQPPRPFTKLAVQESATKREAHAIDHGIALAFSDAMTHWSADVARFSEPIHTSGQILHKLVKSMRP 413
BLAST of Ggra1812.t1 vs. uniprot
Match: A0A7S1TGP5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGP5_9RHOD) HSP 1 Score: 80.9 bits (198), Expect = 6.980e-13 Identity = 103/406 (25.37%), Postives = 181/406 (44.58%), Query Frame = 0
Query: 12 FEKRPGIVQLSATNLVWTPDSAADGREQ-RVPFTAISQFQVSKEGSAKKAMIRLTCSDRSNKITLDFGAS-----FTDRDAVRDVLNRLQ----SAPAFAPP------VVQQPPKKP-----------LSEKQKLWRTSLLQRK-EVRQMHQRLVLTRAVTEDTFWKGMKFRYTPKGELKNPNEPLEHADELNDAGVP---SDAFTATNSCDDLKWDTIPSPAQRHQIFLAHPALKRTFLHKKVS-FDDENMWALFSASSMAPRSARLKSKSDSVRAGAADAFFAPFQAKEAERAIQDREESVHNLHATLAIDRFDDHRTEHIHDPHPE------KRVRVSDALRLMRMVNVHGGMIVGDGWKDSG----------------ERPLEDLVDEPEKSFAPLAVRENA 363
F+K G + + + W + RE +V ++ I+ + SKEG K A I+L + DF + F R+ +++ LNR + S P P V+ + +P +S+++ L R +L + E+R++H+ LV R +++D F+K +KFR + + +N L+ A +L + G+P SD A + K I +PA HQIFLAHPA+ R + S + + F SS+ R RL A AD F+ ++ ++A+ ++ E V + ++ + + D H H+ H E + + + L L R +N HG +++ G K SG LEDL+ P+ PL +++++
Sbjct: 13 FDKTNGEIVVGKDAMTWKAIAPQASREGVQVEYSEIATQKASKEGG-KMAAIKLDLQS-GGSLMFDFRTANGLPDFETRNRLKNFLNRAKDQRLSDPTPDPALNRTQEVLDRASSRPRVEERSIRVNEISQRELLQRAEILMKNAEIRKLHEFLVGKRLISDDEFFKAVKFRLKRESQDENA---LDDAIQL-ERGLPTSMSDPLKAAEESVERK-KFILTPAAIHQIFLAHPAVHRAYRDLVPSKMNQAVFFQKFLESSLYNRD-RL-----GAAASQADELFSKYEVEDADAYRREIGERVGMIEVSINLTKQDPHEQIHLKGRHAEDSDVAIQSRKNAPFLPLARYINRHGTLVIDAGGKSSGGGESHAVHTPWREETHREVLEDLLPAPQLPTIPLEIQQSS 405 The following BLAST results are available for this feature:
BLAST of Ggra1812.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1812.t1 ID=Ggra1812.t1|Name=Ggra1812.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=414bpback to top |