Ggra1748.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1748.t1
Unique NameGgra1748.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length242
Homology
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BLAST of Ggra1748.t1 vs. uniprot
Match: A0A2V3IMS4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMS4_9FLOR)

HSP 1 Score: 409 bits (1050), Expect = 4.370e-143
Identity = 210/241 (87.14%), Postives = 223/241 (92.53%), Query Frame = 0 
Query:    1 MSWMRKFAPLNIRRDRSHDPEFHKAKTQLTNVATALEACVDALDTLQHDYDRLYSGVRKFASDFYSLYPSNDEVRRMGESTVNSADRLLEDVQNRVNAPENTTIHIIDRQIKAYLQEIRNLQKEFKNVANQRADYEAERDRLERAERRGVDEDRRAYLHEQMTIKKTLYEATLRGITHRLGSTYNKHAQVFQAAWTAYVLRLDEGKSLLDKHLRSHRSHAKRLEKDVLRMQLGRLE-FALE 240
            MSWMRK APL IRRDRSHDPEFHK KTQL+NVATALEACV  L+ LQ DYDRLYSGVRKFA+DFYSLYPSNDEVRR+GESTVNSAD LL+DVQ R+NAPEN TIHIIDRQIKAYLQEIRNLQKEFKNVANQRAD+EAERDR +R ERRG+DED+RA L EQM  KKTLYEATLRG+THRLGSTYNKHAQVFQAAWTAYVLRLDEGKSLLDKHLRSHRS+AKRLEKDVLRMQLG LE F+LE
Sbjct:    1 MSWMRKLAPLAIRRDRSHDPEFHKVKTQLSNVATALEACVHGLEALQRDYDRLYSGVRKFANDFYSLYPSNDEVRRLGESTVNSADALLQDVQTRMNAPENGTIHIIDRQIKAYLQEIRNLQKEFKNVANQRADFEAERDRYDRYERRGMDEDKRAILREQMNAKKTLYEATLRGLTHRLGSTYNKHAQVFQAAWTAYVLRLDEGKSLLDKHLRSHRSYAKRLEKDVLRMQLGTLENFSLE 241
The following BLAST results are available for this feature:
BLAST of Ggra1748.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMS44.370e-14387.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..148
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 6..226
e-value: 5.9E-36
score: 125.9
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 15..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:535466..536191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1748.t1Ggra1748.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 535466..536191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1748.t1 ID=Ggra1748.t1|Name=Ggra1748.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=242bp
MSWMRKFAPLNIRRDRSHDPEFHKAKTQLTNVATALEACVDALDTLQHDY
DRLYSGVRKFASDFYSLYPSNDEVRRMGESTVNSADRLLEDVQNRVNAPE
NTTIHIIDRQIKAYLQEIRNLQKEFKNVANQRADYEAERDRLERAERRGV
DEDRRAYLHEQMTIKKTLYEATLRGITHRLGSTYNKHAQVFQAAWTAYVL
RLDEGKSLLDKHLRSHRSHAKRLEKDVLRMQLGRLEFALEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf