Ggra1700.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1700.t1
Unique NameGgra1700.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length143
Homology
BLAST of Ggra1700.t1 vs. uniprot
Match: A0A2V3IJE4 (Thioredoxin-like protein 4A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJE4_9FLOR)

HSP 1 Score: 255 bits (652), Expect = 1.120e-85
Identity = 123/142 (86.62%), Postives = 134/142 (94.37%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTRAYN 142
            MSYLLPHLDSE  VN+AL+ E+ERVV++RWGTD+DPTCMIMDETLY VAELVKNFAVIYLVDIT VTAF+E FKLTD CSVMFFHRDKHIMVDMGTGNNNKITF ITD+QD+IDI+EVV+RGARKGRGLVTAPKDYSTRAYN
Sbjct:    1 MSYLLPHLDSESAVNEALRKEEERVVVLRWGTDSDPTCMIMDETLYRVAELVKNFAVIYLVDITQVTAFSEAFKLTDACSVMFFHRDKHIMVDMGTGNNNKITFVITDKQDMIDIIEVVYRGARKGRGLVTAPKDYSTRAYN 142          
BLAST of Ggra1700.t1 vs. uniprot
Match: R7QBS8 (Thioredoxin-like protein 4A n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBS8_CHOCR)

HSP 1 Score: 246 bits (629), Expect = 3.600e-82
Identity = 116/139 (83.45%), Postives = 132/139 (94.96%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSYLLPHL++ E VN ALQTE+ERVV+IRWGTD+DPTCMIMDETLY VAELVKNFAVIYLVDI+ VTAFNE+++LTDPC+VMFFHRDKHIMVDMGTGNNNKITFP+T+ QDLIDI+EVV+RGARKGRGLV AP+DYST+
Sbjct:    1 MSYLLPHLETAEAVNNALQTEEERVVVIRWGTDSDPTCMIMDETLYKVAELVKNFAVIYLVDISQVTAFNEDYQLTDPCTVMFFHRDKHIMVDMGTGNNNKITFPMTNTQDLIDIIEVVYRGARKGRGLVDAPRDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: A0A8J5XLA5 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XLA5_DIALT)

HSP 1 Score: 199 bits (505), Expect = 2.830e-63
Identity = 93/139 (66.91%), Postives = 120/139 (86.33%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSYLLPHL+S   V++A+ +E++RVV+IR+G D DP CM MDETL+++AELVKN+AVIYLVDIT V  FN  ++L DPC+VMFF R+KHIM+D+GTGNNNKI + +TD+Q++IDI+E VFRGARKGRGLV +PKDYST+
Sbjct:    1 MSYLLPHLNSGWAVDQAILSEEDRVVVIRFGHDYDPVCMRMDETLHSIAELVKNYAVIYLVDITQVPDFNSMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWALTDKQEMIDIIETVFRGARKGRGLVVSPKDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: T1G1Q3 (Thioredoxin-like protein n=14 Tax=Bilateria TaxID=33213 RepID=T1G1Q3_HELRO)

HSP 1 Score: 197 bits (502), Expect = 8.110e-63
Identity = 91/139 (65.47%), Postives = 118/139 (84.89%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSY+L HL +   V++A+ +E++RVV+IR+G D DPTCM+MDETLYNVAE VKNFA IYLVDIT V  FN+ ++L DPC+VMFF+R+KHIM+D+GTGNNNKI + + D+Q+ IDI+E +FRGARKGRGLV +PKDYST+
Sbjct:    1 MSYMLQHLKNGWQVDQAILSEEDRVVIIRFGHDWDPTCMVMDETLYNVAERVKNFATIYLVDITEVPDFNKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAMEDQQEFIDIIETIFRGARKGRGLVVSPKDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: A0A4V1J1W2 (Spliceosomal protein DIB1 n=2 Tax=Zoopagales TaxID=78899 RepID=A0A4V1J1W2_9FUNG)

HSP 1 Score: 197 bits (500), Expect = 1.640e-62
Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSY LPHL +   V++A+ +E++RVV+IR+G D DP CM MDE LY +AE VKNFAV+YLVDIT V  FN+ ++L DPC+VMFF+R+KHIMVD+GTGNNNKI +P+ D+Q+LIDI+E VFRGARKGRGLV +PKDYST+
Sbjct:    1 MSYFLPHLTNGWQVDQAILSEEDRVVVIRFGHDWDPICMRMDEALYGIAERVKNFAVVYLVDITEVPDFNKMYELYDPCTVMFFYRNKHIMVDLGTGNNNKINWPLEDKQELIDIIETVFRGARKGRGLVVSPKDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: A0A7S2ZP47 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZP47_9RHOD)

HSP 1 Score: 196 bits (499), Expect = 2.320e-62
Identity = 93/139 (66.91%), Postives = 115/139 (82.73%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSYLLPHL S   V++A+ TE+ RVV+ R+G+D DPTCM+MDETL+  AE VKNFAVIYLVDI  V  FN  ++L DPC++MFF R+KHIMVD+GTGNNNKI +P+ D Q+ IDI+EVV+RGARKGRGLV +PKDYST+
Sbjct:    1 MSYLLPHLRSGWAVDQAILTEENRVVVCRFGSDTDPTCMLMDETLFKAAEKVKNFAVIYLVDIQEVPDFNSMYELYDPCTIMFFFRNKHIMVDLGTGNNNKINWPLQDVQEFIDIVEVVYRGARKGRGLVISPKDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: A0A1Y2HH57 (Spliceosomal protein DIB1 n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HH57_9FUNG)

HSP 1 Score: 196 bits (498), Expect = 3.300e-62
Identity = 90/139 (64.75%), Postives = 119/139 (85.61%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            M++ LPHL +   V++A+ +E++RVV+IR+G D DP+CMIMDETLY +A+ VKNFAVIYLVDIT    FN+ ++L DPC++MFF R+KHIMVDMGTGNNNKI +P+ D+Q+LID++EVVFRGARKGRGLV +P+DYST+
Sbjct:    1 MAFFLPHLTNGWQVDQAILSEEDRVVVIRFGHDWDPSCMIMDETLYGIADKVKNFAVIYLVDITETPDFNKMYELYDPCTLMFFFRNKHIMVDMGTGNNNKINWPVEDKQELIDLIEVVFRGARKGRGLVVSPRDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: U9UUZ9 (Spliceosomal protein DIB1 n=12 Tax=Eukaryota TaxID=2759 RepID=U9UUZ9_RHIID)

HSP 1 Score: 196 bits (497), Expect = 4.680e-62
Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSY LPHL +   V++A+ +E++RVV+IR+G D DPTCM MDETLY +AE VKNFAVIYLVDIT V  FN+ ++L DPC+VMFF R+KHIM+D+GTGNNNKI + + D+Q+LIDI+E V+RGARKGRGLV +PKDYST+
Sbjct:    1 MSYFLPHLTNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDETLYGIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWALEDKQELIDIIETVYRGARKGRGLVVSPKDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: U6J310 (Thioredoxin-like protein n=42 Tax=Protostomia TaxID=33317 RepID=U6J310_ECHGR)

HSP 1 Score: 195 bits (495), Expect = 9.440e-62
Identity = 89/139 (64.03%), Postives = 119/139 (85.61%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSY+L HL +   V++A+ +E++RVV+IR+G D DP+CM+MDETL+ VAE +KNFAVIYLVDI+ V  FN+ ++L DPC+VMFF+R+KHIM+D+GTGNNNKI +PI D+Q+ IDI+E V+RGARKGRGLV +PKDYST+
Sbjct:    1 MSYMLAHLTNGWQVDQAILSEEDRVVIIRFGHDWDPSCMVMDETLFQVAEKIKNFAVIYLVDISQVPDFNKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWPIEDKQEFIDIVETVYRGARKGRGLVVSPKDYSTK 139          
BLAST of Ggra1700.t1 vs. uniprot
Match: A0A6F9DW51 (Thioredoxin-like protein n=4 Tax=Bilateria TaxID=33213 RepID=A0A6F9DW51_9ASCI)

HSP 1 Score: 195 bits (495), Expect = 9.440e-62
Identity = 89/139 (64.03%), Postives = 117/139 (84.17%), Query Frame = 0
Query:    1 MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAELVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNNKITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTR 139
            MSY+LPHL +   V++A+  EQERVV+IR+G D DP CM MDETLY++A+ VKNFA IYLVDI+ V  FN+ ++L DPC+ MFF+R+KHIM+D+GTGNNNKI +P+ D+Q++IDI+E +FRGARKGRGLV +PKDYST+
Sbjct:    1 MSYMLPHLTNGWQVDQAILNEQERVVVIRFGHDWDPACMKMDETLYSIADKVKNFAAIYLVDISEVQDFNKMYELYDPCTTMFFYRNKHIMIDLGTGNNNKINWPMEDKQEMIDIVETIFRGARKGRGLVVSPKDYSTK 139          
The following BLAST results are available for this feature:
BLAST of Ggra1700.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJE41.120e-8586.62Thioredoxin-like protein 4A n=1 Tax=Gracilariopsis... [more]
R7QBS83.600e-8283.45Thioredoxin-like protein 4A n=1 Tax=Chondrus crisp... [more]
A0A8J5XLA52.830e-6366.91Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
T1G1Q38.110e-6365.47Thioredoxin-like protein n=14 Tax=Bilateria TaxID=... [more]
A0A4V1J1W21.640e-6266.19Spliceosomal protein DIB1 n=2 Tax=Zoopagales TaxID... [more]
A0A7S2ZP472.320e-6266.91Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1Y2HH573.300e-6264.75Spliceosomal protein DIB1 n=1 Tax=Catenaria anguil... [more]
U9UUZ94.680e-6266.19Spliceosomal protein DIB1 n=12 Tax=Eukaryota TaxID... [more]
U6J3109.440e-6264.03Thioredoxin-like protein n=42 Tax=Protostomia TaxI... [more]
A0A6F9DW519.440e-6264.03Thioredoxin-like protein n=4 Tax=Bilateria TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004123Dim1 familySMARTSM01410DIM1_2coord: 4..136
e-value: 1.0E-72
score: 257.6
IPR004123Dim1 familyPIRSFPIRSF017199Dim1coord: 1..142
e-value: 8.1E-60
score: 198.4
IPR004123Dim1 familyPFAMPF02966DIM1coord: 4..136
e-value: 5.9E-55
score: 184.7
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 1..139
IPR004123Dim1 familyCDDcd02954DIM1coord: 10..123
e-value: 1.71632E-53
score: 162.464
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..141
e-value: 1.6E-60
score: 204.7
NoneNo IPR availablePANTHERPTHR12052:SF9SUBFAMILY NOT NAMEDcoord: 1..139
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 5..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:402465..402893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1700.t1Ggra1700.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 402465..402893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1700.t1 ID=Ggra1700.t1|Name=Ggra1700.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=143bp
MSYLLPHLDSEEDVNKALQTEQERVVLIRWGTDADPTCMIMDETLYNVAE
LVKNFAVIYLVDITHVTAFNENFKLTDPCSVMFFHRDKHIMVDMGTGNNN
KITFPITDEQDLIDIMEVVFRGARKGRGLVTAPKDYSTRAYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004123Dim1
IPR036249Thioredoxin-like_sf