Ggra1670.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1670.t1
Unique NameGgra1670.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length926
Homology
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BLAST of Ggra1670.t1 vs. uniprot
Match: R7QBV3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBV3_CHOCR)

HSP 1 Score: 148 bits (373), Expect = 1.570e-33
Identity = 97/280 (34.64%), Postives = 148/280 (52.86%), Query Frame = 0 
Query:  654 LWEEDVLKLQAQLREDDVDSLTTEDDS----DTPLHTRMPLLQLIAKRVSEKSIAFEDLESINPEEETLRYYKETKNDPPYAPDSDSPGLKWVEDCVKQMLGSQPRMSQFSKSDDIDLHHSDEXXXXXXIDKGSGVKIYRESSDSSDPLESSDDXXGEDGSLRAAVHGGS-------KRSRREARSRASKARELQGRVCGDLLPTMTSEARRRVLRWAERDFTWFEDGSDFMEIVAARSSKRCHRCNMPDDD-DLNCEESILLKLWKDMSWRKVRRMRHR 921
            LW++ + +L+  +  ++  S +  D      +T L   +P L+ I   V +  +   + +  + +   ++ YK TK+D PYAP + SPG ++  D  K     + R     K DD               +  +G       +   D   ++    GE+ S+R+   GG        K +R E    + +ARELQ RVCG LL +M++EA+ RVLRWAE D +WF+DG+D MEIVA+R  K C +C+  D + +  CEESILLKLW +M+WRK+RRMRHR
Sbjct:  322 LWDKRLERLEDAIAANETGSPSLSDVEADIEETMLFEIIPTLEKIMDAVRDGEMGLLECDQYSQQNAVIQAYKNTKDDAPYAPTAKSPGTQFYLDVWKDRRARKERKLSVPKIDD-------GGAQGFATNNPNGGTFANGGTSGEDRSPTASQHTGEN-SVRSDSSGGKVGEDDAQKAARLEREEASERARELQSRVCGKLLESMSAEAKVRVLRWAEADCSWFDDGTDMMEIVASRVVKTCAQCDERDGNYNEKCEESILLKLWANMTWRKIRRMRHR 593
The following BLAST results are available for this feature:
BLAST of Ggra1670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QBV31.570e-3334.64Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..661
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 752..833
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..739
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 780..796
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 571..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..729

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:306920..309697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1670.t1Ggra1670.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 306920..309697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1670.t1 ID=Ggra1670.t1|Name=Ggra1670.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=926bp
MFSSSVNSQTRAERLCASLSRSFETPKLGTKESSIHEFIGPVASERYALL
PPKSDAAAKALLAVGLKRGVGEVRLLENIRKRRGLPDHPSPRFDHFVSFM
LQTPSTAFDRCAEICDTYTPSPHLLSLVPHVPSPGEGKLNGTNTYSAGSH
PGSSSTLGLQQLQLADESELAPNPAVVDVDAIQSAPKSFGPTSVYTPHTN
SLRRIISESERPIGAEEGNVSNALEKLTIDLSFDNQTGKVSIDLVFVPVQ
PVPKQSPQPFTRIANPSIRRQAKTADMAVKLLPSANVGPSELPMATGNAD
FENHAANASPFGPRIVPEQQKETYHLRPNAPALNMTLLQDEIKVPVPPSV
PNAKTKTSPQASQAPQSDSGDDVILVETSLKPAPSLPSSATLTKSRRKRS
NIIARRSTPIFQRRKRMKDIAMNSLQSDSQPPNKIAPALLRSRRAAARAS
SQESSLRRSKRRARPIAPLLDESDTDNEYRNQELDEDFEPEVGPVAMQPV
TSQEPKSLDVEKPSQEERERPNAGPAHQKTKHVRFNDEIEEMQIPEPETG
SPASRTRSRRPGLVGRKTMSSSRSLRDEEEEILDSHDSVISRPKIVRRTQ
IRKSLPQPSRSKRSSSPTSAGIQIHGKQNSGTNGNGPSQPVSPHSNISEE
RPNLWEEDVLKLQAQLREDDVDSLTTEDDSDTPLHTRMPLLQLIAKRVSE
KSIAFEDLESINPEEETLRYYKETKNDPPYAPDSDSPGLKWVEDCVKQML
GSQPRMSQFSKSDDIDLHHSDEDEDEDDIDKGSGVKIYRESSDSSDPLES
SDDQDGEDGSLRAAVHGGSKRSRREARSRASKARELQGRVCGDLLPTMTS
EARRRVLRWAERDFTWFEDGSDFMEIVAARSSKRCHRCNMPDDDDLNCEE
SILLKLWKDMSWRKVRRMRHRHNDR*
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