Ggra1651.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1651.t1
Unique NameGgra1651.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length647
Homology
BLAST of Ggra1651.t1 vs. uniprot
Match: A0A2V3IJB2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB2_9FLOR)

HSP 1 Score: 635 bits (1637), Expect = 9.700e-220
Identity = 373/659 (56.60%), Postives = 446/659 (67.68%), Query Frame = 0
Query:    1 MTAQPRPHRRGSKRRREQPDALVPSEFFARDELDSDDSA---------------------PKEPHFEVDDLDSTDDEQTEAPQDALSSQQPL-LGLTDAVFASDDXXXXPDFELASAQPLPSPPSSPAADPDAENLPFTLAHXXXXXXXXXXXXDIHFPLDNAHPSLQAQDTLQSSEGSPSSPHHDMAYAQFLQALNFTTPTEPQAFPDPFSQLLDDDDEFDYMREAANVRDDPLEFREDLPVSRREVAQLLSERDIALRSQKRQRTRRAASAAAASGIPPLFPPNLTPVPSTSRPVPSIAPVAPVTSVPPXXXXXXXXXXXXXXXXXXXXXVTAPKAATASHMQQQALLPSAVASFSPVCLSQFQHQLKAFVQILTHVHANSAKSVRMSSDEQQDAVAKVVYDKSEIMLKRVLENRNTSVAYHAMLETHIMHIARFSDGLSFRQFEQCFAKQNRRKSVYGIEGLEDIEAFLNDCQTIAIDQMPGRALERVEKISQPHLKQALMTRRRQFTLSGAREGWYTWTAEDDRLLALTIAKYGREVAEYSKDLLPHRMEEDCQARVRHLCSRRCTDNAVKRQMMLISAPLNQQEAILVQHGLRVFGGRVEDEEVWKRIQRELLPGRQWSLLQKLWMWREARKKTKARYRAKTSQKKKAMKNASK 637
            M+A+PRP RR SKRRR +P   V +E F RDELDSDD A                     P+EPHFEVDDLDSTDD+     Q A +  +P  +G  D  FAS+D    PDFEL  A  LPSPP SP        LPF LA  XXXXXXXXXXX     + +    +Q Q+  +SS+  P +P  D+ YAQFLQALN +  + P   P+ F+QLLDDDDEFDYMREAANV+DDPLEFR DL VSRREVAQLLSERDIALRSQ++QR RR+ASAA    +P   P NL         VP+ AP+                                  A     M+   LLP  +   +P+ +S FQ Q KAFVQIL HVHAN++KS RMS D Q     K   D+SE MLKRV+ NR  S +YH ML+ H+MHI+RFSD L +R FEQCF K+NRRKS Y I+G E IE F++DC+T+ ++Q+P  A+ R++ + +PHLKQAL TR+RQFTL+GAREGW+TWTAEDDRLLALTIAKYGREV EY+KDLLPHR+E DCQARVRHL SRRC DNAVKRQ+M ISAPLNQQE  LVQ+GL+ FG RVED +VWKRIQRELLPGRQWSLLQKLW+WRE RKKTKARYRAK S++K+A+++A K
Sbjct:    1 MSARPRPCRRVSKRRRVEPFPSVTAEGFTRDELDSDDPAEHAPQHAKLHSSFAHLSDSLIPEEPHFEVDDLDSTDDDHFPPNQAATTLAEPQPIGFADVPFASEDEEDDPDFELNPAYALPSPPPSPXXX----XLPFNLASFXXXXXXXXXXXXASGAIIHQPQPVQVQEVPKSSDSGPVTPSRDLTYAQFLQALNPSIASSPVP-PEAFNQLLDDDDEFDYMREAANVQDDPLEFRNDLLVSRREVAQLLSERDIALRSQRKQRARRSASAAKPPAVPLSLPQNL---------VPAHAPIV-------------------------AGGHACAAAPAPMPMRSLPLLPGTIMPLNPLSISHFQEQFKAFVQILAHVHANASKSFRMSDDGQSHQDTKQTLDRSERMLKRVVLNRQLSASYHDMLDKHVMHISRFSDELGYRAFEQCFRKENRRKSAYAIDGFESIEMFMSDCRTLPVEQLPSGAVARLDIVCRPHLKQALSTRKRQFTLTGAREGWFTWTAEDDRLLALTIAKYGREVGEYAKDLLPHRLEGDCQARVRHLSSRRCADNAVKRQVMHISAPLNQQEVALVQYGLQSFGSRVEDCDVWKRIQRELLPGRQWSLLQKLWLWRETRKKTKARYRAKESERKRALRDARK 620          
BLAST of Ggra1651.t1 vs. uniprot
Match: R7Q8N9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N9_CHOCR)

HSP 1 Score: 305 bits (781), Expect = 2.400e-90
Identity = 192/467 (41.11%), Postives = 269/467 (57.60%), Query Frame = 0
Query:  182 PQAFPDPFSQLLDDDDEFDYMREAANVRDDPLEFREDLPVSRREVAQLLSERDIALRSQKRQRTRRAASAAAASGIPPLFPPNLTPVPSTSRPVPSIAPVAPVTSVPPXXXXXXXXXXXXXXXXXXXXXVTAPKAATASHMQQQALLPSAVASFSPV-CLSQFQHQLKAFVQILTHVHANSAKSVRMSSDEQQDAVAKVVYD---------KSEIMLKRVLENRNTSVAYHAMLETHIMHIARFSDGLSFRQFEQCFAKQNRRKSVYGIEGLEDIEAFLNDCQTIAIDQMPGRALERVEKISQPHLKQALMTRR--RQFTLSGAREGWYTWTAEDDRLLALTIAKYG-REVAEYSKDLLPHRMEEDCQARVRHLCSRRCTDNAVKRQMMLISAPLNQQEAILVQHGLRVFG--GRVEDEEVWKRIQRELLPGRQWSLLQKLWMWREARKKTKARYRAKTSQKKKAMK 633
            P   P P S  LDDDD+FDY+RE+A V+DDPLE+R+DL VSR+E+ QL S   + LR Q R       S A+ +  P     ++  +P  SR + S AP A  ++  P                     V  P   +          P+A     PV C++    Q+   VQ+LT VHA + K  R + + + ++ A    D         +SE++L+ ++EN+  S  YH  L T++  +  FS+ L  R     F  +  + S Y +  L+ +E F++DC+   +++MPG  L R +    P + QA+ TR   RQ++ SG R GW++WTA DD LLA+T+AKYG  EV ++SKDLLPHR E+DCQ RV++L SRRC DN VKRQ+MLI++PLN  E   V  GL +FG    ++D  VWKRIQ ELLPGR+WS LQKLW WRE R+K KA+YRA++ +KKKAMK
Sbjct:  279 PGGLPPP-SWALDDDDDFDYLRESARVQDDPLEYRDDLQVSRKELVQLFSNSTVGLRRQTRH------SRASQTVKPRQSNRSIRALP-ISRTL-SSAPAAAASAPHPVVNGAVSNTLRSQTGPSANRSVPTPYIGS----------PNAPFINLPVHCVNMLHEQMSIHVQLLTAVHAKAKKVSRSAREPRFESGANETVDISTANAAANRSEVLLRGLVENKKVSALYHQALATNLSRLKAFSEKLLHRDGNAAFKYETCKTSAYNLPVLDLLEQFISDCRNANLEEMPGNVLARFKPFHNPQISQAMWTRPQGRQYSASGLRPGWFSWTAGDDFLLAITMAKYGSNEVGQFSKDLLPHRKEDDCQTRVKYLSSRRCPDNPVKRQVMLITSPLNNYEVEQVTRGLSMFGRGACLDDAAVWKRIQAELLPGREWSHLQKLWHWRETRRKYKAKYRARSYKKKKAMK 726          
The following BLAST results are available for this feature:
BLAST of Ggra1651.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJB29.700e-22056.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8N92.400e-9041.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..646
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..48
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 499..542
e-value: 0.00114681
score: 35.2438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:271075..273015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1651.t1Ggra1651.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 271075..273015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1651.t1 ID=Ggra1651.t1|Name=Ggra1651.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=647bp
MTAQPRPHRRGSKRRREQPDALVPSEFFARDELDSDDSAPKEPHFEVDDL
DSTDDEQTEAPQDALSSQQPLLGLTDAVFASDDDDDDPDFELASAQPLPS
PPSSPAADPDAENLPFTLAHFASEDEEDDPDFDIHFPLDNAHPSLQAQDT
LQSSEGSPSSPHHDMAYAQFLQALNFTTPTEPQAFPDPFSQLLDDDDEFD
YMREAANVRDDPLEFREDLPVSRREVAQLLSERDIALRSQKRQRTRRAAS
AAAASGIPPLFPPNLTPVPSTSRPVPSIAPVAPVTSVPPATPTAHIAPVA
PPTTVAPATPVTAPKAATASHMQQQALLPSAVASFSPVCLSQFQHQLKAF
VQILTHVHANSAKSVRMSSDEQQDAVAKVVYDKSEIMLKRVLENRNTSVA
YHAMLETHIMHIARFSDGLSFRQFEQCFAKQNRRKSVYGIEGLEDIEAFL
NDCQTIAIDQMPGRALERVEKISQPHLKQALMTRRRQFTLSGAREGWYTW
TAEDDRLLALTIAKYGREVAEYSKDLLPHRMEEDCQARVRHLCSRRCTDN
AVKRQMMLISAPLNQQEAILVQHGLRVFGGRVEDEEVWKRIQRELLPGRQ
WSLLQKLWMWREARKKTKARYRAKTSQKKKAMKNASKRDSNTVADG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb