Ggra1639.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1639.t1
Unique NameGgra1639.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length220
Homology
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BLAST of Ggra1639.t1 vs. uniprot
Match: E1ZA34 (RWP-RK domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZA34_CHLVA)

HSP 1 Score: 57.0 bits (136), Expect = 6.870e-6
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0 
Query:    3 PSGLTFAQCEQYFHLPVALAALRLRVSRPTISKVLRRHGVRRWPFRKLQAQARQLS 58
            PS +T  +  Q+FHLP   AA  +RVS   + +V RRHGV RWP+RK+++ +R LS
Sbjct:   32 PSEITREELAQWFHLPAEEAARVMRVSLTVLKQVARRHGVLRWPYRKVKSLSRALS 87
The following BLAST results are available for this feature:
BLAST of Ggra1639.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
E1ZA346.870e-648.21RWP-RK domain-containing protein n=1 Tax=Chlorella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 6..51
e-value: 8.4E-12
score: 44.9
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 1..73
score: 13.44648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:230420..231379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1639.t1Ggra1639.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 230420..231379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1639.t1 ID=Ggra1639.t1|Name=Ggra1639.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=220bp
MPPSGLTFAQCEQYFHLPVALAALRLRVSRPTISKVLRRHGVRRWPFRKL
QAQARQLSTLRASPRLPPDSARCLSPAHSVRRERVAAQRLLSARSARRDA
PHTPPESPRCASPWRNDAFPTWASGGEGWRASRPPSAKAVFGGAWTRGVF
TDSEEGVHFQFLRPGQRVCTPKLSQNAAAGSDGFEQYGALEHAEDGLLPF
GDVFGATASFCDSDVWRWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom