Ggra1546.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1546.t1
Unique NameGgra1546.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A2V3J0N5 (Putative ran guanine nucleotide release factor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0N5_9FLOR)

HSP 1 Score: 252 bits (644), Expect = 1.930e-82
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 0
Query:    1 MVGSKSSEGQ---RSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            MVG+ S   Q   R LFGGAI+T IP +FADVSKIRQ+PDNQE+F+HA TDRS+IVE+L++ P IP   H TPASHHF++IA D+ A +  L  ++ L  +  P L   D  +H+SFA G HVVSKFRD    ANTVNVYVVCIRLP   TD+LL FNDP+ LHP SSST LGS+VA+P QTD T+RS++LQQ L++F I+DWSLF+
Sbjct:    1 MVGAASHSAQPHHRPLFGGAISTAIPPQFADVSKIRQVPDNQEIFAHAPTDRSLIVELLQLHPDIPQPPHTTPASHHFSVIATDAHALRADLAASKLLPTSQLPALLTVDPRLHLSFAHGTHVVSKFRDHTAAANTVNVYVVCIRLPNVATDVLLVFNDPIQLHPHSSSTNLGSSVADPHQTDPTIRSSVLQQALNTFQINDWSLFR 207          
BLAST of Ggra1546.t1 vs. uniprot
Match: R7QCS1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCS1_CHOCR)

HSP 1 Score: 180 bits (457), Expect = 5.170e-54
Identity = 88/193 (45.60%), Postives = 130/193 (67.36%), Query Frame = 0
Query:   11 RSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLF 203
            R LFGGA+T  +P  F DVS++R +PDNQE F+HAETDRS+IVE+L+ +  +P  +H   A+ H + +A DS+A   +L ++  L   ++P L+ GD  + +S A G H V+KF+D +  A+ VNV++ CI LP+ TTD+L+ FNDPV LHP  SS R+GS VAN Q+++   R+ +    L +  ++DWSLF
Sbjct:   19 RDLFGGAMTLSLPPFFTDVSRLRGVPDNQEAFAHAETDRSLIVELLQQEHPLPV-AHTLAATFHLDELASDSAALSSNLVYSAALPPDDFPLLKQGDPALQVSVAHGVHTVAKFKDAESLASQVNVHLACITLPRVTTDLLVVFNDPVVLHPWGSSARVGSQVANSQESNPERRAELFDHALRTLQVNDWSLF 210          
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A485KZZ0 (Aste57867_13354 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZZ0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.820e-39
Identity = 83/197 (42.13%), Postives = 120/197 (60.91%), Query Frame = 0
Query:   10 QRSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHAT--NYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            +  L+GGA++  IP  FADVS+ RQ+PDNQEVF+ A TDR VIVE+LE++ S+P ES    A ++F+ +A  +  A   +T  Q   AT  + P LR     +  + A G+  V+KF  K+   N + +YV CIRLP  TTD+++S   P+AL+P SSSTR G  + N          +IL+ +L +  +H+WSLFQ
Sbjct:    2 KHDLYGGALSCEIPQGFADVSEFRQVPDNQEVFAEAATDRCVIVELLELEASVPLESS---AEYYFHELAESNGCAPNDVTILQTCQATETDLPSLR-----VIANIAIGKQCVAKF--KEAAKNIMQLYVCCIRLPNVTTDLVVSVTVPLALNPDSSSTRDGQIIGNADDG-----LSILKDILRTITVHNWSLFQ 183          
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A6G0WUJ0 (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUJ0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.190e-38
Identity = 84/193 (43.52%), Postives = 118/193 (61.14%), Query Frame = 0
Query:   13 LFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSI-PSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            L+GGA++  IP  FADVS  RQ+PDNQEVF+ A TDR VI+E+LE++ S+ PS S +     +F  +A  +  A    T  Q L AT     + G   +  + A G+  V+KF  K+   NT+ +YV CIRLP+ TTD+++S   P+AL+P SSSTR G  V N  +       AIL+++L +  +HDWSLFQ
Sbjct:    5 LYGGALSCQIPQGFADVSGFRQVPDNQEVFAEAATDRCVIIELLELEASVQPSASGE----FYFKELADSNGCAPGDYTILQTLQATETDLPKLG---VQANIAIGKQNVAKF--KEAAKNTMQLYVACIRLPQVTTDLVVSVTVPLALNPNSSSTRDGQVVTNADEG-----FAILKEILRTLAVHDWSLFQ 183          
BLAST of Ggra1546.t1 vs. uniprot
Match: W4GVC0 (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVC0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.350e-34
Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 0
Query:   10 QRSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHAT--NYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            ++ L+GGA++  IP  FADVS+ RQ+PDNQEVF+ A TDR +IVE+LE++ ++   +    +  +F+ IA  +   +   T  Q   AT  + PGL       H++   G+  V+KF  K+   NT+ +YV CIRLP  TTD+++S   P+ LHP SSS+R G T  N  +  L      L+ +L +  +H+W LFQ
Sbjct:    2 KQDLYGGALSCEIPVGFADVSEFRQVPDNQEVFADAATDRCIIVELLELESTVVGPA---TSEFYFHEIAESNKCMRHDCTILQTFLATEQDLPGLA---TTAHVTI--GKQCVAKF--KEASKNTMQLYVCCIRLPTVTTDLVVSVTVPLQLHPSSSSSRDGPTATNADEGLL-----FLKGILRTLKVHNWGLFQ 183          
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A024U9H8 (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9H8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.040e-33
Identity = 78/194 (40.21%), Postives = 114/194 (58.76%), Query Frame = 0
Query:   13 LFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHAT--NYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            L+GGA++  IP  FADVS+ RQ+PDNQEVF+ A TDR +IVE+LE++ S+   S    +  +F+ IA  ++ A    T  Q L AT  + PGL        ++   G+  V+KF  K+   NT+ +YV C+RLP  +TD+++S   P+ LHP SSS+R      N  +  L     IL+ +L +  +HDW LFQ
Sbjct:    5 LYGGALSCEIPRGFADVSEFRQVPDNQEVFAEAATDRCIIVELLELEASV---SGTATSEFYFHEIAESNNCAPNDCTILQTLLATEQDIPGLA---TTAFVTI--GKQCVAKF--KEASKNTMQLYVCCVRLPNVSTDLVISVTVPLQLHPSSSSSRDAPIATNADEGQL-----ILKGLLRTLEVHDWGLFQ 183          
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A1V9ZX15 (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX15_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.960e-33
Identity = 82/196 (41.84%), Postives = 113/196 (57.65%), Query Frame = 0
Query:   10 QRSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQ--LHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLF 203
            +RSLFGGAI+  +P  F DVS  RQ+PDNQEVF+ A TDR VIVE+L++D  +   S    A+++FN IA  ++  Q   T      + A   PGL+      HI  A G   V+KF +     N + VYV C+RL   TTD+++S   PVA++P SSS+    TVA    T++   S  L+ +  S V+HDW LF
Sbjct:    2 KRSLFGGAISCDVPQGFTDVSTFRQVPDNQEVFAEAATDRCVIVELLQLDEHV---SDGNCAAYYFNEIADSNACLQTDRTILSSFTMPANEVPGLQ---TEAHI--AVGTQHVAKFNEAA--KNVIQVYVCCLRLQNVTTDLVVSVTVPVAINPNSSSS---DTVA----TNVEEGSLFLKNIFRSLVVHDWELF 180          
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A067C9B4 (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9B4_SAPPC)

HSP 1 Score: 124 bits (312), Expect = 1.560e-32
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   10 QRSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            +RSLFGGAI+  +P  FADVS+ RQ+PDNQEVF+ A TDR VI+E+L+M+ +I   +       +FN IA DS+A  C+ T      A   P        +    A G   V+K+  K+   N + VYV C+RLP+ TTD+++S   P+++ P SSS            TD+   S  L+ +  S  +HDW LFQ
Sbjct:    2 KRSLFGGAISCDVPNGFADVSEFRQVPDNQEVFADAATDRCVIIELLQMEDTIGDSA---TGVFYFNEIA-DSNA--CAPTDRHVAQAFTMPASEVHGLQVPAHIAVGTQAVAKY--KEAAKNVIQVYVCCLRLPRATTDLVVSVTVPISVDPNSSS-------RGHVPTDVDEGSVFLKAIFRSLAVHDWDLFQ 181          
BLAST of Ggra1546.t1 vs. uniprot
Match: A9UR92 (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UR92_MONBE)

HSP 1 Score: 124 bits (312), Expect = 2.060e-32
Identity = 75/195 (38.46%), Postives = 106/195 (54.36%), Query Frame = 0
Query:   10 QRSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLFQ 204
            +R+L  GA+   +PA F DVS  RQ+PD QEVF    TD+SVIVEILEM P   +   Q  A  HFN +AHD+ A +  +    QL    + G       +  S + G   V+KF +    AN V V+V C R P  +TDI++S+N P+ ++  SSS       A  Q  D     ++ Q +++SF + DWS+FQ
Sbjct:    5 ERALLEGAMRIGLPARFEDVSAFRQVPDTQEVFVDVRTDQSVIVEILEMVPDATATG-QGAADFHFNSLAHDNDALESHIEQRDQLRPLPFNGYV-----VVRSVSIGVQRVAKFNEAAERANQVRVHVACFRFPHVSTDIVVSWNQPIEINASSSSAEAVDAAALAQNGDAL---SLFQPMIESFAVLDWSIFQ 190          
BLAST of Ggra1546.t1 vs. uniprot
Match: A0A1Y1Y0C3 (Ran GTPase binding protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y0C3_9FUNG)

HSP 1 Score: 122 bits (305), Expect = 2.240e-31
Identity = 73/195 (37.44%), Postives = 112/195 (57.44%), Query Frame = 0
Query:   11 RSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRSVIVEILEMDPSIPSESHQTPASHHFNIIA-HDSSAAQCSLTFTQQLHATNYPGLRGGDDNIHISFAQGQHVVSKFRDKDLFA-NTVNVYVVCIRLPKFTTDILLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDWSLF 203
            + LFGGAITT +P  F D+S++R++PDNQEV+    TD+SVIVE+LE+       +    AS+HF  IA H+ ++A+  +    QL  +  P L     +       G+  +SK+ + D  A N VN+Y+   R+PK TTDI++S+N PV + P SSS    +   +  + +        +++L SF I+DWSLF
Sbjct:    8 KELFGGAITTYVPTTFIDISQLREVPDNQEVYVDTNTDQSVIVELLEL---AEEAADADCASYHFKQIAEHNDASAENQILKVVQLEDSEVPNL---PKDAKKYLLVGRQTISKYNESDPNARNVVNIYLAVFRIPKITTDIIVSYNHPVVIGPTSSSRDTQAGSVDEVENNF-------KKILASFNINDWSLF 189          
The following BLAST results are available for this feature:
BLAST of Ggra1546.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0N51.930e-8260.39Putative ran guanine nucleotide release factor n=1... [more]
R7QCS15.170e-5445.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A485KZZ02.820e-3942.13Aste57867_13354 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WUJ03.190e-3843.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GVC07.350e-3439.09Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A024U9H81.040e-3340.21Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A1V9ZX151.960e-3341.84Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067C9B41.560e-3239.49Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A9UR922.060e-3238.46Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A1Y1Y0C32.240e-3137.44Ran GTPase binding protein n=1 Tax=Basidiobolus me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007681Ran-interacting Mog1 proteinPFAMPF04603Mog1coord: 12..157
e-value: 3.7E-36
score: 124.5
IPR007681Ran-interacting Mog1 proteinPANTHERPTHR15837RAN GUANINE NUCLEOTIDE RELEASE FACTORcoord: 3..204
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 7..204
e-value: 5.6E-46
score: 158.7
NoneNo IPR availablePANTHERPTHR15837:SF0RAN GUANINE NUCLEOTIDE RELEASE FACTORcoord: 3..204
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 10..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:424604..425218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1546.t1Ggra1546.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 424604..425218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1546.t1 ID=Ggra1546.t1|Name=Ggra1546.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MVGSKSSEGQRSLFGGAITTVIPAEFADVSKIRQIPDNQEVFSHAETDRS
VIVEILEMDPSIPSESHQTPASHHFNIIAHDSSAAQCSLTFTQQLHATNY
PGLRGGDDNIHISFAQGQHVVSKFRDKDLFANTVNVYVVCIRLPKFTTDI
LLSFNDPVALHPQSSSTRLGSTVANPQQTDLTVRSAILQQVLDSFVIHDW
SLFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007681Mog1
IPR016123Mog1/PsbP_a/b/a-sand