Ggra1509.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1509.t1
Unique Name	Ggra1509.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	422

Homology

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BLAST of Ggra1509.t1 vs. uniprot
Match: A0A2V3J3F2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F2_9FLOR)

HSP 1 Score: 521 bits (1341), Expect = 1.460e-181
Identity = 298/421 (70.78%), Postives = 332/421 (78.86%), Query Frame = 0

Query:    1 MALGGAARPLLVPAADVLAKNWRTYDGSHGNREGARAQPSSSSTLFMSIDAITESDAGARNSLVRFRAAKPDSKPNPIALLFARLFSGAGKAQSSDEPHAPDKSPLLAKLHKLWPPLEKASAIASRLPDPTVLFLALVLAVLLINRYRPHWFQSILVKIAVILSFLPLFALALLWRKTELFAQLREGRNPLSHPAEHMLDDLEAELKAREDNVKKAQNTLNANRSKLDALRKELAKDPNAADANAIIVPSRKAASMIAAGALGAGYDAEAAHAVEARRREESVKKSREEWLQKAEEVENNAGQTEESVKLLQHHASTAYSKRTREIKTRSASG-RPSERLRALKKAPFSSLSNRQTADDGGSPVERLSERTATSNAHSTASSRRWSLFRXXXXXXXVSSPDGGAMSLTSTPRITAESADDR 420
            MALG AARPLLVPAADV+AKN  +YD  + ++     Q +SS+T  MS  A+TES++ +R   VRF+AAKPDSKPNP+  LF RLFSGA          A  KS L AKL KLWPPLEKASAIASRLPDPTVLFLA VLAVLL+NRYRP WFQSIL+KIAVILSFLPLFALA LW KTELFAQLREG NPLSHPAEHMLDDLEAELKARE+NVKKA+  L  NR++LDALRKELAKDPNA D  AIIVPSRKAA+MIAAGALGAGYDAEAAHAVEARRREESVKKS EEW QKAEEVE  A QTEESV+L+ HHASTAY KRTREIKTRSASG + ++RL+ALKK+PFS L+NRQ  DD  + + R SE T  S A+ST S R+W LFR        SS   G+ SL STPR+T ESA DR
Sbjct:    1 MALGSAARPLLVPAADVIAKNMSSYD-PYSSQSPDADQAASSATFLMSFGAVTESESRSRRHAVRFKAAKPDSKPNPLVQLFHRLFSGASSQXXXXXXDAACKSALAAKLAKLWPPLEKASAIASRLPDPTVLFLAFVLAVLLVNRYRPQWFQSILIKIAVILSFLPLFALAFLWGKTELFAQLREGVNPLSHPAEHMLDDLEAELKAREENVKKAEEKLYHNRAQLDALRKELAKDPNATDPKAIIVPSRKAAAMIAAGALGAGYDAEAAHAVEARRREESVKKSLEEWRQKAEEVEKTASQTEESVQLMVHHASTAYPKRTREIKTRSASGPKSTDRLKALKKSPFSGLANRQNTDDSATHLTRFSEHTNASQANST-SRRKWGLFRRKRRSTNASSAGAGSQSLLSTPRVTTESAADR 419

The following BLAST results are available for this feature:

BLAST of Ggra1509.t1 vs. uniprot

BLAST of Ggra1509.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3F2	1.460e-181	70.78	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 280..307
None	No IPR available	COILS	Coil	Coil	coord: 199..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 398..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..421
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..317
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 176..421
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 127..145
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 146..150
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..126
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 151..175
None	No IPR available	TMHMM	TMhelix		coord: 151..173
None	No IPR available	TMHMM	TMhelix		coord: 122..144

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000844_pilon	contig	tig00000844_pilon:282471..283736 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1509.t1	Ggra1509.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000844_pilon 282471..283736 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1509.t1 ID=Ggra1509.t1|Name=Ggra1509.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=422bp
MALGGAARPLLVPAADVLAKNWRTYDGSHGNREGARAQPSSSSTLFMSID
AITESDAGARNSLVRFRAAKPDSKPNPIALLFARLFSGAGKAQSSDEPHA
PDKSPLLAKLHKLWPPLEKASAIASRLPDPTVLFLALVLAVLLINRYRPH
WFQSILVKIAVILSFLPLFALALLWRKTELFAQLREGRNPLSHPAEHMLD
DLEAELKAREDNVKKAQNTLNANRSKLDALRKELAKDPNAADANAIIVPS
RKAASMIAAGALGAGYDAEAAHAVEARRREESVKKSREEWLQKAEEVENN
AGQTEESVKLLQHHASTAYSKRTREIKTRSASGRPSERLRALKKAPFSSL
SNRQTADDGGSPVERLSERTATSNAHSTASSRRWSLFRRRRRRTTVSSPD
GGAMSLTSTPRITAESADDRR*