Ggra1449.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1449.t1
Unique NameGgra1449.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length316
Homology
BLAST of Ggra1449.t1 vs. uniprot
Match: A0A2V3IH72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH72_9FLOR)

HSP 1 Score: 372 bits (954), Expect = 3.330e-126
Identity = 188/291 (64.60%), Postives = 230/291 (79.04%), Query Frame = 0
Query:    1 MVQFRIECVLPFSAEHFWRIRDAPSFLEFVVRDGMLKEMRATEPIQDADGWTSRVQHYTPKDVDCPDMIRAFIGDTMFAVSDEQRWNSRERPLHLHFFIRPSFLSNLSRTFGELCLQQCGADSQAEQALSPE--EQQLETSSAG--------------STSDPDCCEDDDPQPEEHSVDAYLDNLPPDEKAVHIVSGETKVSILTLGWFIERAIVHNLRKFYEKYPATVVRFRKKLYDDFAQGDTSVPISVVIDRFLESENKLKEKLSGLEDVKESDASSLSDSTDSLELK 275
            MV+F+IEC LPF A  FWRIRDAPSFL F+V+DG+LKEMRATEP+++ DGW SRVQ YTP DVDCPDMIRAF+GDTMFAVSDEQRWNS ERP HLHFFIRPSFLS LSRT+GEL ++Q   +  +++ +  E  + Q E  +                S++D DC ++ D +  E + D +L+ LP +EK++H+V+GET+VSILTLGWFIERAIVHNLRKFYEKYP +V+RFRKKLYDDFAQGDT+VP+SVVIDRFLESE KLKEKLS +E+  ESD  +LSDS+DS+ELK
Sbjct:    1 MVRFQIECTLPFPAADFWRIRDAPSFLSFIVQDGLLKEMRATEPVEEPDGWYSRVQQYTPADVDCPDMIRAFVGDTMFAVSDEQRWNSDERPCHLHFFIRPSFLSGLSRTYGELSIEQMYTEPPSDEDIREETLDDQSEQDAXXXXXXXXXXXXXXXDSSTDVDCSDESDVELSEQTPDEFLEALPAEEKSLHVVTGETRVSILTLGWFIERAIVHNLRKFYEKYPPSVIRFRKKLYDDFAQGDTNVPVSVVIDRFLESEKKLKEKLSAVEESAESDELALSDSSDSVELK 291          
BLAST of Ggra1449.t1 vs. uniprot
Match: A0A5J4Z2A6 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2A6_PORPP)

HSP 1 Score: 128 bits (321), Expect = 2.250e-30
Identity = 82/249 (32.93%), Postives = 129/249 (51.81%), Query Frame = 0
Query:    2 VQFRIECVLPFSAEHFWRIRDAPSFLEFVVRDGMLKEMRATEP-IQDADGWTSRVQHYTPKDVDCPDMIRAFIGDTMFAVSDEQRWNSRERPLHLHFFIRPSFLSNLSRTFGELCL-----------------QQCGADSQAEQALSPE---EQQLETSSAGSTSDPDCCEDDDPQPEE---HSVDAYLDNLPPDEKAVHIVSGETKVSILTLGWFIERAIVHNLRKFYEKYPATVVRFRKKLYDDFAQ 226
            ++FR+ECVL ++ E +W+I     FL+F+V+DG LK + ATEP   D +    R++ Y P+ V+ PDM+   IGD+M  V D QRWN   +P H+ F IRP+FL     T G L L                  + GA+ +A   L+PE   E +L+         PD  ++D P+ E     +  +   + PP    +H VSG  +V++  +G+++E+A+  N+ KFY  YP     F+  + +   Q
Sbjct:    3 LEFRVECVLNWAREDYWKIMSFGGFLDFLVKDGCLKRISATEPEFHDDEQVFRRIRTYVPRHVEAPDMVMRVIGDSMLEVHDHQRWNQATKPFHVDFEIRPTFLREFIETKGYLSLGAYEIPTAEPDAAVVDVAEPGANEEAG-PLAPEGTEEDRLQ---------PDTAQEDVPEKEAGGAQTTTSSAGSSPP--ATMHTVSGVCQVNMFYVGYYLEQAVKQNMVKFYHMYPQHCANFKHYVVEKVKQ 239          
BLAST of Ggra1449.t1 vs. uniprot
Match: R7QHY3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHY3_CHOCR)

HSP 1 Score: 121 bits (304), Expect = 2.800e-30
Identity = 62/109 (56.88%), Postives = 84/109 (77.06%), Query Frame = 0
Query:  138 TSSAGSTSDPDCCED----DDPQPEEHSVDAYLDNLPPDEKAVHIVSGETKVSILTLGWFIERAIVHNLRKFYEKYPATVVRFRKKLYDDFAQGDTSVPISVVIDRFLE 242
            +SSAGST+DPD  ++    D    E++   + + +LP +E+ VH+VSGET+VSILT+GWF+ERAIVHNL+ FY  YPA+V+RFR+KLY +FA+GD SV  SVV+DR LE
Sbjct:   11 SSSAGSTTDPDGSDNGEASDTSDCEQNEPTSLISSLPAEERCVHVVSGETRVSILTVGWFVERAIVHNLKNFYAMYPASVMRFRQKLYAEFAEGDESVNCSVVVDRLLE 119          
BLAST of Ggra1449.t1 vs. uniprot
Match: A0A1X6P4L1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4L1_PORUM)

HSP 1 Score: 79.0 bits (193), Expect = 1.670e-13
Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 0
Query:   66 PDMIRAFIGDTMFAVSDEQRWNSRE-RPLHLHFFIRPSFLSNLSRTFGELCLQQCGADSQAEQALSPEEQQLETSSAGSTSDPDCCEDDDPQPEEHSVDAYLDNLPPDEKAVHIVSGETKVSILTLGWFIERAIVHNLRKFYEKYPATVVRFR 217
            PD +R+ +G T+F V+DEQ W++    P    F I PSFL+ LS T+G L ++   A+                   GS  D        P P + +    +   P      H + G  +V ++ +G F+ER+I+HNLR FY +YPAT+ RFR
Sbjct:    2 PDFVRSLVGPTLFEVTDEQVWDAAPGAPPVQSFRITPSFLTQLSTTYGVLSVRPAAAE------------------PGSGGDAP------PLPADVAARPTIGGAPV-SWCTHTIDGTARVRLVGVGGFVERSILHNLRLFYHEYPATIDRFR 129          
The following BLAST results are available for this feature:
BLAST of Ggra1449.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IH723.330e-12664.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z2A62.250e-3032.93Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
R7QHY32.800e-3056.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P4L11.670e-1333.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:118905..119852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1449.t1Ggra1449.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 118905..119852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1449.t1 ID=Ggra1449.t1|Name=Ggra1449.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=316bp
MVQFRIECVLPFSAEHFWRIRDAPSFLEFVVRDGMLKEMRATEPIQDADG
WTSRVQHYTPKDVDCPDMIRAFIGDTMFAVSDEQRWNSRERPLHLHFFIR
PSFLSNLSRTFGELCLQQCGADSQAEQALSPEEQQLETSSAGSTSDPDCC
EDDDPQPEEHSVDAYLDNLPPDEKAVHIVSGETKVSILTLGWFIERAIVH
NLRKFYEKYPATVVRFRKKLYDDFAQGDTSVPISVVIDRFLESENKLKEK
LSGLEDVKESDASSLSDSTDSLELKEDVKESDASSLSDSTDSLELKEDVL
DFARAALLPETDHPY*
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