Ggra1447.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1447.t1
Unique Name	Ggra1447.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	192

Homology

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BLAST of Ggra1447.t1 vs. uniprot
Match: A0A2V3IEP5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEP5_9FLOR)

HSP 1 Score: 307 bits (787), Expect = 1.150e-104
Identity = 156/191 (81.68%), Postives = 173/191 (90.58%), Query Frame = 0

Query:    1 MFRSSGVIRRACARQARLLHEDSSRGDFLGFSISRAPASDARYGMDMSRAPGYEVAADEEPPRSCNQKLADFASRHGRLSASQVQKAKGYLWVGTVLYPAEQGSDVDVTFTWEIVQEPEDFEHSDHVNNVIEVIENPEEIPVMEAKRRYSGGQARRIRKERARNAAXXXXXXXXXXXXXKPENDVPDDEGS 191
            MFRSSGV+RR CARQ RLLHEDSSRGDFLGFSISRAPASDARYGMDM+RAPGYE+AAD+EPP+S NQKLADFA+RHGRLS SQVQKAKGYLWVGTVLYPAEQGSDVDVTFTWEIV EPEDFE +DHVN++IEV+EN E+ P++EAKRRY+GGQARRIRKER RNAA     XXXXX   KP+ND+P+DE S
Sbjct:    1 MFRSSGVLRRVCARQTRLLHEDSSRGDFLGFSISRAPASDARYGMDMTRAPGYEIAADDEPPQSSNQKLADFATRHGRLSTSQVQKAKGYLWVGTVLYPAEQGSDVDVTFTWEIVNEPEDFESNDHVNSIIEVVENLEDNPLIEAKRRYTGGQARRIRKERTRNAAKKSVRXXXXXPTRKPDNDIPEDEDS 191

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BLAST of Ggra1447.t1 vs. uniprot
Match: R7QL56 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL56_CHOCR)

HSP 1 Score: 151 bits (381), Expect = 4.450e-43
Identity = 93/195 (47.69%), Postives = 116/195 (59.49%), Query Frame = 0

Query:    1 MFRSSGVIRRACARQARL---LHEDSSRGDFLGFSISRAPASDARYGMDMSRAPGYEVAADEEPPRSCNQKLADFASRHGRLSASQVQKAKGYLWVGTVLYPAEQGS-DVDVTFTWE--IVQEPEDFEHSDHVNNVIEVIENPEEIPVMEAKRRYSGGQARRIRKERARNAAXXXXXXXXXXXXX--KPENDVPD 187
            M RS   + RA    + L   LHEDS RGDFLGF  +    +D R+GMDM+RAPGYE+AADE+PP   NQKLADFA+RH RLS++Q+ +A GY+WVG+VLYP      D DV F+WE  + +     E  D  + V+             A RRY+GGQARRIRK+R RNA                KPEND+PD
Sbjct:    1 MLRSMRALHRAGGVHSPLRRHLHEDS-RGDFLGFVSANVARADPRFGMDMTRAPGYELAADEDPPLVGNQKLADFAARHARLSSAQMLQADGYMWVGSVLYPNSIAHHDFDVEFSWERDVPERKVTLEVQDEKDEVL-------------ASRRYTGGQARRIRKDRERNAVKRASRRLRRRASPTRKPENDIPD 181

The following BLAST results are available for this feature:

BLAST of Ggra1447.t1 vs. uniprot

BLAST of Ggra1447.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IEP5	1.150e-104	81.68	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QL56	4.450e-43	47.69	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000844_pilon	contig	tig00000844_pilon:113691..114266 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1447.t1	Ggra1447.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000844_pilon 113691..114266 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1447.t1 ID=Ggra1447.t1|Name=Ggra1447.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=192bp
MFRSSGVIRRACARQARLLHEDSSRGDFLGFSISRAPASDARYGMDMSRA
PGYEVAADEEPPRSCNQKLADFASRHGRLSASQVQKAKGYLWVGTVLYPA
EQGSDVDVTFTWEIVQEPEDFEHSDHVNNVIEVIENPEEIPVMEAKRRYS
GGQARRIRKERARNAAKKAVRRANRRPIRKPENDVPDDEGS*