Ggra1372.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1372.t1
Unique Name	Ggra1372.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	532

Homology

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BLAST of Ggra1372.t1 vs. uniprot
Match: A0A2V3J2M9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2M9_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 2.780e-96
Identity = 208/394 (52.79%), Postives = 253/394 (64.21%), Query Frame = 0

Query:  125 RALQAALTHATYAAVAPMLPALRVRAALRAAIALWLFT-------VAALAPRRVPR-VXXXXXXXXXXXXXXRAPVELALLVAGAAAVAQQRALVERAAPRHMLATRLALLHSAIXXXXXXXXXXXXXTVAWPWLLFALLAAVHLGLLPTTLRSVRKEMHGEATPRHALPAHVSSPFPSFRRHPRLVLVLLTMFASAATSSFLRPLLAVHLVDVHNNSSVMFVALLFSLHAVAAFLAETLVPPMLSQQIGLRSAVLIGVLTSLAGFAFVHHAFLVTGVFFVALGSSTSLVLAVSDLAATTNQTLTSVSDPIAVLASRTFSLGEGFGILLAGALAQSLGFSFAVMVWYRVLIVVAVLAIVPHVLAALIACCKPFSFLVATSMSSSLAVDESTPLL 510
            RA+ AALTHATYAA AP+LP L VR+A   A AL  F        VA LA RR  R                R    LAL VAG  A+AQ  +LV   A R +LA RLALLHS I                +P L F  LA  H  L+P  LR   K +H    P+ A P+  S   PS R HPRL+LVL+ M ASAATSS+LRPLL  ++   +  SS M  ALLFSLHAVAAFLAETLVPP+L+  I LR+AV +G+LT+L G + VHH+F+  G+FF+ALGSS SLVLAVSD+AATTNQ L SV+DPIAVLA+RTFS GE  G+ LAG LA+  GF FA++VWYRV+IVVA++ +VPH++   + CC PF+FL+ATS S+S    E TPLL
Sbjct:   37 RAVHAALTHATYAAAAPVLPLLGVRSAFGVAAALGAFVLPPLLLPVAVLANRRALRSALHAVAAVPPLLLALRVCPPLALAVAGTVALAQHASLVAARAHRRVLAMRLALLHSFIAAAAVLAPPLAAALFRFPTLPFFALALAHAVLVPFALRDDHKRVHA---PQIA-PSEASPALPSLREHPRLILVLIAMLASAATSSYLRPLLVPYMAPDNTLSSYMRPALLFSLHAVAAFLAETLVPPLLTNHITLRTAVSLGILTALTGVSLVHHSFITIGLFFMALGSSASLVLAVSDIAATTNQPLNSVTDPIAVLAARTFSCGEALGMFLAGVLAERSGFDFAILVWYRVMIVVALIVVVPHLV---LRCCTPFAFLLATSASTSDLSHEQTPLL 423

The following BLAST results are available for this feature:

BLAST of Ggra1372.t1 vs. uniprot

BLAST of Ggra1372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2M9	2.780e-96	52.79	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 112..480 e-value: 4.3E-9 score: 37.6
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 129..475
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..111
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 461..484
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 365..384
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 243..247
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 181..204
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 302..323
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 485..531
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 224..242
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 456..460
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 170..180
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 335..353
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 354..364
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 324..334
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 150..169
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 205..223
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 385..389
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 269..301
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 415..434
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 390..414
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 248..268
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 435..455
None	No IPR available	TMHMM	TMhelix		coord: 365..384
None	No IPR available	TMHMM	TMhelix		coord: 302..324
None	No IPR available	TMHMM	TMhelix		coord: 224..246
None	No IPR available	TMHMM	TMhelix		coord: 429..451
None	No IPR available	TMHMM	TMhelix		coord: 250..272
None	No IPR available	TMHMM	TMhelix		coord: 461..483
None	No IPR available	TMHMM	TMhelix		coord: 334..353
None	No IPR available	TMHMM	TMhelix		coord: 182..204
None	No IPR available	TMHMM	TMhelix		coord: 150..167
None	No IPR available	TMHMM	TMhelix		coord: 388..410

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000092_pilon	contig	tig00000092_pilon:396331..397926 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1372.t1	Ggra1372.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000092_pilon 396331..397926 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1372.t1 ID=Ggra1372.t1|Name=Ggra1372.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=532bp
MPPRRRAVELRAARAPWTVSRCAQRPVTSAARGARSRSGAVQVALSTWRR
ASAAWRTCRAPTATSRAALCVSTRRRRWVSPQPDAPSAIMDEDAVAGGGS
GGGSGGDGGGGGGSSSSCAGAFAPRALQAALTHATYAAVAPMLPALRVRA
ALRAAIALWLFTVAALAPRRVPRVAALAAPLAPLLVALRAPVELALLVAG
AAAVAQQRALVERAAPRHMLATRLALLHSAIAAAAVVAPPLAAATVAWPW
LLFALLAAVHLGLLPTTLRSVRKEMHGEATPRHALPAHVSSPFPSFRRHP
RLVLVLLTMFASAATSSFLRPLLAVHLVDVHNNSSVMFVALLFSLHAVAA
FLAETLVPPMLSQQIGLRSAVLIGVLTSLAGFAFVHHAFLVTGVFFVALG
SSTSLVLAVSDLAATTNQTLTSVSDPIAVLASRTFSLGEGFGILLAGALA
QSLGFSFAVMVWYRVLIVVAVLAIVPHVLAALIACCKPFSFLVATSMSSS
LAVDESTPLLSTPASDDPPSTVTLDSDFSRV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036259	MFS_trans_sf