Ggra1366.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1366.t1
Unique NameGgra1366.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Homology
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BLAST of Ggra1366.t1 vs. uniprot
Match: A0A2V3J5N0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N0_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 4.820e-46
Identity = 92/192 (47.92%), Postives = 121/192 (63.02%), Query Frame = 0 
Query:   39 QAGVPRSAPALSQPEPQKKKPRAAHLMPKLTVEDFSEASFQEAIRIGRKAKARGKPKEGREAKALGDLLRNMSKWAKQIAPQYSFSEFIFASQALGTNRSLRPMLANLRLAEFREVNAEFEATPAVDSGAQPN--------EGGGEVMAEAPPDEFLGC--DDPPGDQWEEEDVMMDRMEMENIQSRTKVPP 220
            Q G  R +  LS  EP KKK RAAHLMPKL+ +DF+  + ++ I+IGR+ KARG PK G EA+AL  LLR M+ WAKQ+APQYS  EF+FASQA+GTNRSLRP+LAN RLAE REVNAE                      +  G+++A+ PP  F     +D P D WE++D ++ ++EM+ +   T   P
Sbjct:   10 QVGQTRPSQPLSSSEPPKKKHRAAHLMPKLSADDFTIKAIEDVIKIGRRTKARGPPKPGNEAQALSSLLRRMTAWAKQVAPQYSLPEFMFASQAIGTNRSLRPILANFRLAELREVNAEXXXXXXXXXXXXXXXXXXXXXXQTDGQIVADVPPPGFESTTWNDEPNDGWEDDDALVAQLEMDIVNKETTSAP 201
The following BLAST results are available for this feature:
BLAST of Ggra1366.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5N04.820e-4647.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012923Chromosome segregation in meiosis protein 3PFAMPF07962Swi3coord: 90..149
e-value: 1.3E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:384468..385220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1366.t1Ggra1366.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 384468..385220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1366.t1 ID=Ggra1366.t1|Name=Ggra1366.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MSMVYKGNAQNHITLPKLRQSHLLLSTPSMIPVQATTLQAGVPRSAPALS
QPEPQKKKPRAAHLMPKLTVEDFSEASFQEAIRIGRKAKARGKPKEGREA
KALGDLLRNMSKWAKQIAPQYSFSEFIFASQALGTNRSLRPMLANLRLAE
FREVNAEFEATPAVDSGAQPNEGGGEVMAEAPPDEFLGCDDPPGDQWEEE
DVMMDRMEMENIQSRTKVPPPSNTEEVAGEAHESRAEQLGTCNEKTTGQL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012923Csm3