Ggra1365.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1365.t1
Unique Name	Ggra1365.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	434

Homology

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BLAST of Ggra1365.t1 vs. uniprot
Match: A0A2V3J5U7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U7_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 6.460e-64
Identity = 163/536 (30.41%), Postives = 220/536 (41.04%), Query Frame = 0

Query:   44 FGPPPVPESIKRLDMLEFQRRQGSTPNPSLPPEVLQSLLDKYPRIKKFHEAMQEEMRRDDYDPNDYRVYSWAYNYLRPRGMGRPLQALIAFLVSYATVKLVQ-----------------------------------------EYINQI--------------------------------------------------------------------------------------------------------------------------------------------------------IIQTKSKALSLH--------------------------------PNPDVSFRASPPMMLRPDEDQLATNVGVMAYKDMPVFAYLDREQEIMKQTGVTEWLKHRAKQIPAHTEEEKEERDEKALLSWARPLEPEEEKLSIEDYFATVEDDEYFYDPTTGNWLFVDG---AKGREDGEGGAKDNAQNGWDLNADDDETLDIPAEWEPMIQRMLDSN-NRVRDGKVESQDDEESGSPP 350
            FGPPP+P+SIKRLD  E +RRQ   PNP LPP   +SL D+YP ++K HEAM  EM  DDYDP DYRVYSWAY  LRP  +G PL +LI    ++A VKL+Q                                          + N +                                                                                                                                                        +  T+   ++ H                                P+P +SF  SP MMLRP +D  ++ V  ++  +MPVFAYL +E+E+MK TG+TEWLK R++Q+PA+ +E + ERD  ALLSWARPL+PEEE+LSI+DY  TVEDDEY YDPTTGNW+F D    +  R+DG     D  Q  ++LN ++DE ++IP EWEP+++RML+ N     + + + Q D++S SPP
Sbjct:    2 FGPPPIPDSIKRLDEFELERRQKPMPNP-LPPHFFESLFDQYPSVRKVHEAMTREMASDDYDPEDYRVYSWAYQQLRPTAIGLPLLSLIVGTTAFAIVKLIQYIRANLEKQILANMLVTADTVATGVLTGFIPVILLSWAWQKAHFNDVRTDGVRRSVTMFCLTALALPAVWAMSATTNVTLGIACALFVRFMLAFSIWGWVDLRREAFLGDALLARVYKAWRSCLTVGVLIFGSLLRSMAFLAPHEVPVKEVFGRHANSLRQALGKRFPVACSLCNDPRGLFLAGGLAIIALVSYVLYLAVFVTEFYQINCHRRCESPLTSLFVKKGIYQPNRHPDESKGSLSAPDPSMSFHPSPAMMLRPTKDWDSSTVQPLSGTNMPVFAYLKKEEEVMKTTGLTEWLKPRSEQVPAYDDESRMERDLDALLSWARPLKPEEEELSIDDYVQTVEDDEYMYDPTTGNWIFTDDLAESGKRKDGMDDRSDKMQP-FELNGEEDEMVEIPPEWEPLVKRMLEKNAEHPFENQDDQQVDDDSDSPP 535

The following BLAST results are available for this feature:

BLAST of Ggra1365.t1 vs. uniprot

BLAST of Ggra1365.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5U7	6.460e-64	30.41	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..410

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000092_pilon	contig	tig00000092_pilon:381249..384173 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1365.t1	Ggra1365.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000092_pilon 381249..384173 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1365.t1 ID=Ggra1365.t1|Name=Ggra1365.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=434bp
MQTSFIHPFSNPRLRTSRKRPRATCCTASNASRSDEVPKFSSRFGPPPVP
ESIKRLDMLEFQRRQGSTPNPSLPPEVLQSLLDKYPRIKKFHEAMQEEMR
RDDYDPNDYRVYSWAYNYLRPRGMGRPLQALIAFLVSYATVKLVQEYINQ
IIIQTKSKALSLHPNPDVSFRASPPMMLRPDEDQLATNVGVMAYKDMPVF
AYLDREQEIMKQTGVTEWLKHRAKQIPAHTEEEKEERDEKALLSWARPLE
PEEEKLSIEDYFATVEDDEYFYDPTTGNWLFVDGAKGREDGEGGAKDNAQ
NGWDLNADDDETLDIPAEWEPMIQRMLDSNNRVRDGKVESQDDEESGSPP
TVYVSPESEMRRNKGKMRKICGDDDNRMMCDRSAKKVHNTELAKVAKISD
PDERDAAVGNENARHSQYEAGQRSSSPMKTVDE*