Ggra1362.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1362.t1
Unique Name	Ggra1362.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	1469

Homology

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BLAST of Ggra1362.t1 vs. uniprot
Match: A0A2V3J1U9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1U9_9FLOR)

HSP 1 Score: 282 bits (721), Expect = 3.370e-74
Identity = 204/571 (35.73%), Postives = 309/571 (54.12%), Query Frame = 0

Query:    1 MRLHHVLIDTNSALQYCNTPETSSNRIERVSKDLHAAILDLLPKDKCESFTFHAFSSLLPSAPLCRALQMSPKTLQNLQNEIATNLQLVATAPSSASRSDESASIFGVVKVLQRLMRKLSNSRNMYSTKPIKHTVYLFSCGPGP-ETGTQLKPPVVLDMPREKSTMQSSNTLREILKQLNSYNMHLVWIRLGPPH---QQHKAALPFSEKTSSLEAWAQNNAGLEIKHFADLLQPKQPPRRPLAFSLQKRLRTAPSSGESQNKDGNM--AQIVFEQNHERDGEILTCISNVRLLSLQKPTHILGKKTT--FVLSHYLKNWESPSFEKGFEDTK--PKTLKPRASEDFEAFSSFMLFLMRTETVVVANELTVDPKERKVDNRVVIIVPFTANVASICHMP-FRVRHSASPGCALPKNYHQWRNWHSGGQAQKMNTESFRNGKSSVVYEKLLSTGFPG--NAWQECGDAKN-----PENPDKNASVQRKNNLEMESTGIKLGPRIQEDARTGTAIPHA---SVRKGDPVLTSSESSLMAKIPKHEFSDGKPKAT-----VTVTKNGFRYNRVS 545
            M LHH+LID+ S+L     P+  SN+ + VSKDL+ AI ++L   KCE FTFH F+S LPS P C   QMSP+TL N+QNEI TNLQL   +P     +D+S S+ GV KVL +L+RK++N R M+S KP++HTVYLF   P   E G   +  +  D+ R  + ++ +N+L E   +L+  ++ LVW+ LG  +   Q  +   P     SS+    +N   + I +    L  + P ++ LA SL+KRL +A    E    +G+   AQIVFEQ +E   + L  +++V + SLQ  +   GK+ T  F+LSHYLK+ E    E      +  P+T++PR+  D  +FSSF+ +L +  T+ VA E++VD K+R +  R V+IVP++ NVA++  +P     HS      +PK Y QW NW++GG+A + + E   +  + ++ E  L+    G  N       AK+     P N  +N  +   NN+++ +  +   P+       G   P A   SV     V  +++ S    +   + + G    T      TVTKNGFRY RVS
Sbjct:    1 MALHHILIDSYSSLLSHGCPQDPSNQAQDVSKDLYQAISNILRDAKCERFTFHIFNSTLPSPPRCETQQMSPRTLGNIQNEIMTNLQLTDLSPIQGPTTDDS-SMSGVTKVLLKLIRKVNNDRVMHSAKPLRHTVYLFCSVPDRYEKGFTSEKVIQADVKRGNA-LEPNNSLYEAFSKLDDGHVRLVWVNLGKRNGEAQAQQTRQPGLGSKSSINCLPENFP-VRITNLHSFLHREPPQKQMLATSLRKRLESA--RNECWQNEGSRINAQIVFEQPNEHPTK-LKLLTSVTIHSLQSSSK--GKRATNIFILSHYLKDSEPFVSENALSAKRSHPRTIRPRSGHDVSSFSSFVRYLKQMHTLAVATEISVDHKQRTLSCRSVLIVPYSTNVATLHRLPNHHSCHSRPRDSNVPKTYDQWMNWYNGGRAIQTDPEVKSDRGTLILNEPALAPSVLGLENRVVSVATAKDNSSHLPRNHGENGYLS--NNVKLSTGRLDGHPKPFAGHVDGRVNPKARLRSVELSTSVFETAQVSPRPALASAQITHGDSLRTNAIRVSTVTKNGFRYKRVS 561

The following BLAST results are available for this feature:

BLAST of Ggra1362.t1 vs. uniprot

BLAST of Ggra1362.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J1U9	3.370e-74	35.73	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 876..896
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1082..1134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 815..829
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1261..1450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 777..808
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1224..1248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 745..829
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1360..1377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1399..1450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 666..684
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1343..1359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1207..1248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 578..614
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 665..689
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1082..1142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1302..1326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..265

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000092_pilon	contig	tig00000092_pilon:365582..369988 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1362.t1	Ggra1362.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000092_pilon 365582..369988 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1362.t1 ID=Ggra1362.t1|Name=Ggra1362.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1469bp
MRLHHVLIDTNSALQYCNTPETSSNRIERVSKDLHAAILDLLPKDKCESF
TFHAFSSLLPSAPLCRALQMSPKTLQNLQNEIATNLQLVATAPSSASRSD
ESASIFGVVKVLQRLMRKLSNSRNMYSTKPIKHTVYLFSCGPGPETGTQL
KPPVVLDMPREKSTMQSSNTLREILKQLNSYNMHLVWIRLGPPHQQHKAA
LPFSEKTSSLEAWAQNNAGLEIKHFADLLQPKQPPRRPLAFSLQKRLRTA
PSSGESQNKDGNMAQIVFEQNHERDGEILTCISNVRLLSLQKPTHILGKK
TTFVLSHYLKNWESPSFEKGFEDTKPKTLKPRASEDFEAFSSFMLFLMRT
ETVVVANELTVDPKERKVDNRVVIIVPFTANVASICHMPFRVRHSASPGC
ALPKNYHQWRNWHSGGQAQKMNTESFRNGKSSVVYEKLLSTGFPGNAWQE
CGDAKNPENPDKNASVQRKNNLEMESTGIKLGPRIQEDARTGTAIPHASV
RKGDPVLTSSESSLMAKIPKHEFSDGKPKATVTVTKNGFRYNRVSIDRPT
LSKGLQRATVDVIGLSSKTESVKDSKPIIPDSKSRKAGIRGSELSNREKE
TPRGMSLTKERLGAEDQRSRLSLNEITGSIPRKESVLQSSSASMGQTRKS
NLTFMGTSKPEFELGSHFGSVEEQRDKESPPIGSQSHERRAVLQDALRPI
RSGDREKILRSFDFSDARPRKCSVHARVVPQKTAVLPQITNDIDRGRIRA
KSSERNHTSRQENPLIANSSLVADEQPEMKYKGDGKKRISVDTETFYRET
DEHHSGQSRSTNGSEPEEANRRSNSEKTGICRTRRLLEVDVVQLEHKPKA
NNEAKWNLSSPTNRTPSRVFTSTDTLTKAIEEFDSVRTELANLSTQALDP
IVTRGMTRLSVISEELVATPHSWPELNSLAKRRLRDDDTLISCMQGEQKS
LFSHEHTQPKLAIGKLWKAVLEALEQVIWLLMKLTDPRAKVSRNPKKKPE
FFRRATTILSCTQVTAELISSIIDSSLFFPAALDKFFELTLVHFAQASNH
SNLMHWTRNVFEHFEKDLPSCESIVNAESVKQSPNRLNLSGQSQEKGMLK
KRSNTKQSSRAPASTRKLSSLIPLKKQISQNPEPLRNHPAFRRGKAFAGV
SKKKRKSSYVQSRPKRACPSNVLDRLIHMGSLQSSLDAIKVPETKDQDVC
NEAVEATDDERDDELDTTLKPEHNGTEKNCSTSDVQGSSRQAVGKVTGPC
SGVTQSTVNVRDRTCSDEAGGAAKDENPPGETAPKLLLMPNSTCVGIAER
PKSKKPSTKIIGKREKERRQDHPKKAEPSSCVLNGSHASDPSPCGDFKER
VEALTLRNRKITRQTRASATPHENAASTERGSESHKNSPKHVSTAHVASK
KRAAKEFELNPVKKRKVNSRDDVGLDGKHSDEVFDQRKPKRSCSREGPSN
RSLLDRFREAVSRINKSW*