Ggra1357.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1357.t1
Unique NameGgra1357.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length396
Homology
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BLAST of Ggra1357.t1 vs. uniprot
Match: A0A2V3J1Z0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z0_9FLOR)

HSP 1 Score: 88.2 bits (217), Expect = 1.460e-15
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 0 
Query:   21 SAVLVFVAICAFHVHRLAASDPI-----SLQTGLHKLVLPGSLHASDPPLASPVDATTVVHHARAYGAF 84
            SA+L F+ +CA+HVHR    DP      SL+TGLHKLVLPGSLHA DPP  SPVDA+TVVHHAR Y  F
Sbjct:    2 SALLFFLLVCAYHVHRYVGMDPSEGPLSSLRTGLHKLVLPGSLHALDPPPPSPVDASTVVHHARHYDRF 70
The following BLAST results are available for this feature:
BLAST of Ggra1357.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1Z01.460e-1565.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..335
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..395
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:356349..357536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1357.t1Ggra1357.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 356349..357536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1357.t1 ID=Ggra1357.t1|Name=Ggra1357.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=396bp
MVLSPLKACYPSLQSPCLSVSAVLVFVAICAFHVHRLAASDPISLQTGLH
KLVLPGSLHASDPPLASPVDATTVVHHARAYGAFPFSSHSHDSLLYPILQ
ASQQHSLPPTLFHDRSPRALMRTSDRLYPVESHSTQTSFPFETTRANYVS
DDQTRAPHSLHAISDSLHSAMSPSQHIETLQPVEQEAPRRHPVIEAFHSI
IGSSPQSKTLDTGNRLHTSQSAVALTDRSEKPASVRATDLVASDHDTRAV
LVPKRETVAEMESDKTINFSEDEQMQQDASSSTLETHTDEAVPIVREADA
VGSSGIETEAKLEVPSISSEGKRDGQVHDAPNRKGLLNLFWGSSRSKEDV
GNVGEGQGITMDSAVKKDEVKVSIEDTNILAAEKNMEKDNEVETS*
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