Ggra1356.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1356.t1
Unique NameGgra1356.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length604
Homology
BLAST of Ggra1356.t1 vs. uniprot
Match: A0A7S4FDN2 (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FDN2_CHRCT)

HSP 1 Score: 77.8 bits (190), Expect = 3.990e-11
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 0
Query:  106 LVRNNDSCDTLHVPMVRPDDYLSLSEKVKLGITHALS-YYDFNWVLKTDSDSFVCFTRVLRLLSN----FDPAGIVHVGRSESTNFLKPDPTHKWYDPG-LTDVLHNPRQHIEKGSVMHPPYMQGAGYVVSRGALKALNKVNKLLRYSPIEDIMIGGWLIAFATHRASM 268
            L +++  C +L +     D YL L  K+K  +    S    F+++LK D D+F+CFT V  L+      F     +++G  E+ + +   P  K+YD   L DVL +  Q+++     +PPYMQG GYV+SR  ++ +  +   L+    ED+M+G WL+    +R  +
Sbjct:  157 LYQSDPVCSSLKLNAA--DGYLQLGHKIKAMMQWIASRVIRFDFLLKADLDTFICFTMVTDLIDTMRIRFGTDQRIYLGHLETCSRVVHHPQDKFYDKHYLEDVLQS--QNVD----CYPPYMQGLGYVLSRDLVQLIGFMAPTLKVYTNEDMMVGIWLVGHQVNRGQL 317          
BLAST of Ggra1356.t1 vs. uniprot
Match: A0A7S4B0K0 (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0K0_CHRCT)

HSP 1 Score: 75.9 bits (185), Expect = 9.010e-11
Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 0
Query:  114 DTLHVPMVRPDDYLSLSEKVKLGITHALSYYDFNWVLKTDSDSFVCFTRVLRLLSNFDPAGIVHVGRSESTNFLKPDPTH----KWYDPGLTDVLHNPRQHIEKGSVMHPPYMQGAGYVVSRG-ALKALNKVNKLLRYSPIEDIMIGGWLIAFAT 263
            D L +P+   D Y  +S+KV   I  A   +DF ++LKTD DSFVC +R++  L    P   +++G     + +  DP      +W D    ++             ++ PYMQGAGY++SR  A + ++K  +L +  PIED ++G  L   AT
Sbjct:  298 DLLLLPV--EDGYREISQKVIAAIRFANENFDFKYLLKTDDDSFVCLSRLMESL-RLQPRSGLYMGVLNKNHSIVLDPWQAHYPRWRDAEYAEIFKRR---------VYLPYMQGAGYILSRDMAERVVSKAAELPKIPPIEDALVGALLADTAT 440          
BLAST of Ggra1356.t1 vs. uniprot
Match: A0A7E4ZWK9 (Hexosyltransferase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4ZWK9_PANRE)

HSP 1 Score: 65.5 bits (158), Expect = 7.890e-8
Identity = 67/223 (30.04%), Postives = 100/223 (44.84%), Query Frame = 0
Query:   42 SGPLISAVTSTWTREQCHLLAMIPVSPAEIQAG-TIRTWYSTISSNLSTIVCCVAVIRS----ERPHAQL-VRNNDSCDTLHVPMVRPDDYLSLSEKVKLGITHALSYYDFNWVLKTDSDSFVCFTRVLRLLSNFDPAGIVHVGRSESTNFLKPDPTHKWYDPGLTDVLHNPRQHIEKGSVMHPPYMQGAGYVVSRGALKALNKVNKLLRYSPIEDIMIGGWL 258
            SG L+ +        Q +LL +I  SP + Q   TIR  +  +S+   T+   V  I +    E   AQL   N    D + +P V  + Y  L+ K   GI +A+  YDF ++LK DSDSFV    +L+ L +     + + G  +     KP  + KW +    D L   R         + PY  G GYV+SR     +    + L+Y   ED+ +G WL
Sbjct:   42 SGNLVPSAPKPVPTLQTYLLILIMSSPGDAQLRETIRNTWLKLSNKGPTVSWAVFPIGTANMDELTIAQLNAENKKFGDLVFLPNVT-ESYDKLARKTADGIRYAVENYDFKFLLKVDSDSFVRVGALLKALRDIAHPRL-YWGFLDGR--AKPFRSGKWKE---VDWLLCDR---------YLPYQLGGGYVISRDLAVFVASNARFLKYYVSEDVSLGVWL 248          
BLAST of Ggra1356.t1 vs. uniprot
Match: A0A154PA43 (Hexosyltransferase n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154PA43_DUFNO)

HSP 1 Score: 61.2 bits (147), Expect = 1.970e-6
Identity = 67/270 (24.81%), Postives = 120/270 (44.44%), Query Frame = 0
Query:    4 RHTSKQFRTRLALFLVLLSILLTVIYEVDIIQLSSRSLSGPLISA-VTSTWTREQCHLLAMIPVSPAEI-QAGTIR-TW----YSTISSNLSTIVCCVAVIRSERPHAQLVRNNDSCDTLHVPMVRPDDYLSLSEKVKLGITHALSYYDFNWVLKTDSDSFVCFTRVLRLLSNFDPAGI---VHVGRSESTNFLKPDPTHKWYDPGLTDVLHNPRQHIEKGSVMHPPYMQGAGYVVSRGALKALNKVNKLLRYSPIEDIMIGGWLIAFAT 263
            R +SK FR+ +   L L   + T++  + +I L    L     S     T T+ +  L+ ++  SP  + Q  TIR TW    Y+T+      ++  + ++  +R   Q  +   + D L +P +  D Y +L++KV   +     YYDF++++K+D D+F+   ++L+ L  ++  G    ++ G       +K     K  D  L D               + PY  G GYV+S   +K +     +L+    ED+ +G WL   A 
Sbjct:   10 RSSSKNFRSMIRKKLYLKPNIPTLLIILIVIVLCIHFLPSTKCSPNEQETKTKSKYRLVILVLSSPDNLEQRATIRKTWLAQKYATVRHLF--VIGTLDILPEQRETLQSEKYKFN-DLLLLPRLT-DSYGTLTKKVLYALKEVYEYYDFDFLMKSDDDTFILVHKILKELEKWESKGTRKELYWGFFNGKAQVKRSGPWKETDWILCDY--------------YLPYALGGGYVLSYNLVKFIALNMDILKLHKAEDVSVGLWLAPLAN 261          
The following BLAST results are available for this feature:
BLAST of Ggra1356.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S4FDN23.990e-1130.77Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4B0K09.010e-1132.26Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7E4ZWK97.890e-830.04Hexosyltransferase n=1 Tax=Panagrellus redivivus T... [more]
A0A154PA431.970e-624.81Hexosyltransferase n=1 Tax=Dufourea novaeangliae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 331..548
e-value: 1.8E-8
score: 36.3
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 339..528
NoneNo IPR availableGENE3D3.90.550.50coord: 49..270
e-value: 7.3E-13
score: 50.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..603
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 124..262
e-value: 6.9E-13
score: 48.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:353216..355027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1356.t1Ggra1356.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 353216..355027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1356.t1 ID=Ggra1356.t1|Name=Ggra1356.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=604bp
MKARHTSKQFRTRLALFLVLLSILLTVIYEVDIIQLSSRSLSGPLISAVT
STWTREQCHLLAMIPVSPAEIQAGTIRTWYSTISSNLSTIVCCVAVIRSE
RPHAQLVRNNDSCDTLHVPMVRPDDYLSLSEKVKLGITHALSYYDFNWVL
KTDSDSFVCFTRVLRLLSNFDPAGIVHVGRSESTNFLKPDPTHKWYDPGL
TDVLHNPRQHIEKGSVMHPPYMQGAGYVVSRGALKALNKVNKLLRYSPIE
DIMIGGWLIAFATHRASMGLDLWAYRPHCYLQPFDYISHKRKGKNKLEEC
TRNNHRCHEVSEGDDVDVRQVAFLIEVDFSNKTRAFIDVYESIRAAFPNN
EVIIGDTSSSDSAMKRFMFARSDDNVKVLWLRETARSVVLNELVSNTVSP
FLCVLSVEQKMSWETMIARMLRPVWNDEADVTSGFLVFNHNRLHSDQGLF
PNGHTIAQNNSEVAFEQVETSWNIWAERQRTVSGTSGFLLARTQFLKETG
WRDYGPFSEAEFSLRLWRANARVKLVNSGIRHGYHYAVDPPSEREEEVKR
YAGPFCEQVAQLLKVKQVKSVAVSSATVHCSERWFRRKYSKYRWRFLNSF
VQW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR002659Glyco_trans_31