Ggra1344.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1344.t1
Unique Name	Ggra1344.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	226

Homology

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BLAST of Ggra1344.t1 vs. uniprot
Match: A0A2V3J5N0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N0_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 5.340e-47
Identity = 102/223 (45.74%), Postives = 132/223 (59.19%), Query Frame = 0

Query:   10 QAGVPRSAPALSQPEPQKKKPRAAHLMPKLTVEDFSEASFQEAIRIGRKAKARGKPKEGREAKALGDLLRNMSKWAKQIAPQYSFSEFIFASQALGTNRSLRPMLANLRLAEFREVNAEFEATPAVDSGAQPN--------EGGGEVTAEAPPDEFLGC--DDPPGDQWEEEDVMMDRMEMENIQSRTKVPP-----PSNTEEVAGEAQESR--SEQLETCNE 215
            Q G  R +  LS  EP KKK RAAHLMPKL+ +DF+  + ++ I+IGR+ KARG PK G EA+AL  LLR M+ WAKQ+APQYS  EF+FASQA+GTNRSLRP+LAN RLAE REVNAE                      +  G++ A+ PP  F     +D P D WE++D ++ ++EM+ +   T   P     P N  E A    +S   S+QLE   E
Sbjct:   10 QVGQTRPSQPLSSSEPPKKKHRAAHLMPKLSADDFTIKAIEDVIKIGRRTKARGPPKPGNEAQALSSLLRRMTAWAKQVAPQYSLPEFMFASQAIGTNRSLRPILANFRLAELREVNAEXXXXXXXXXXXXXXXXXXXXXXQTDGQIVADVPPPGFESTTWNDEPNDGWEDDDALVAQLEMDIVNKETTSAPRKLHVPLNEHEPANPVLQSNDSSKQLEASRE 232

The following BLAST results are available for this feature:

BLAST of Ggra1344.t1 vs. uniprot

BLAST of Ggra1344.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5N0	5.340e-47	45.74	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012923	Chromosome segregation in meiosis protein 3	PFAM	PF07962	Swi3	coord: 61..120 e-value: 1.1E-7 score: 31.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..225

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000092_pilon	contig	tig00000092_pilon:258969..259646 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1344.t1	Ggra1344.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000092_pilon 258969..259646 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1344.t1 ID=Ggra1344.t1|Name=Ggra1344.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=226bp
MIPVQATTLQAGVPRSAPALSQPEPQKKKPRAAHLMPKLTVEDFSEASFQ
EAIRIGRKAKARGKPKEGREAKALGDLLRNMSKWAKQIAPQYSFSEFIFA
SQALGTNRSLRPMLANLRLAEFREVNAEFEATPAVDSGAQPNEGGGEVTA
EAPPDEFLGCDDPPGDQWEEEDVMMDRMEMENIQSRTKVPPPSNTEEVAG
EAQESRSEQLETCNEKTTDQPKAPR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012923	Csm3