Ggra1328.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1328.t1
Unique NameGgra1328.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length418
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1328.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002044Carbohydrate binding module family 20SMARTSM01065CBM_20_2coord: 327..407
e-value: 9.5E-5
score: 31.8
IPR002044Carbohydrate binding module family 20PFAMPF00686CBM_20coord: 340..401
e-value: 1.5E-9
score: 37.5
IPR002044Carbohydrate binding module family 20PROSITEPS51166CBM20coord: 309..416
score: 11.517065
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 336..415
e-value: 3.5E-12
score: 48.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..58
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..417
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableCDDcd05467CBM20coord: 317..414
e-value: 5.92435E-15
score: 68.093
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 339..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:116773..118026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1328.t1Ggra1328.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 116773..118026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1328.t1 ID=Ggra1328.t1|Name=Ggra1328.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=418bp
MPSLLLSAILHLGAGVLGKRLPPPSICADQLPARETDQTSSLPGSATRKA
SSESTSQGCAALPAAQVSNSSARAVPTSLDHQHCVHDATQHCSPHESRDS
AVHSAAQNDAFPTSGPANFTGSPLISRTIEQNNRKRYGRHEWDEDKLKIE
RMGSELFGSFCYSQTVVIGNIPTPVPRGKVFVVSPRANVPPRCFHVCCEP
HPEEWPVALALTGFDWRQSTVWLLRVQDASESDMLQQLKAIEMMSAPCSV
VILLSSSERVRDIVDGAGFCVDETYDERPLFLLRKKELQPRCFENHAPSI
TPQYSPPPEPDEEGLVVRFELCVNSLPEQVRHGMATGCTRIVGNCPELGV
WDVDSGVRLVIAEDVLLAEVLVGKGETEYKYVFVDATGNVLWEDGGNRRL
SYVDQTLLRLEEHWRGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002044CBM_fam20
IPR013783Ig-like_fold
IPR013784Carb-bd-like_fold