Ggra1321.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1321.t1
Unique Name	Ggra1321.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	211

Homology

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BLAST of Ggra1321.t1 vs. uniprot
Match: A0A2V3J2R8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2R8_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 9.270e-84
Identity = 146/212 (68.87%), Postives = 163/212 (76.89%), Query Frame = 0

Query:    1 MDLAMMLSADKRDDTNPPPYVGPATATEPVPLPHKRARLDTNATTLPSQKLQPPRDSAMPSASSPAPPAASPYSELQKAVHNALESRTPALTTADKVALALEVLRARQLELDLAQARSNIEALVSNSGAAPRTLRAVIPSTAVKGLPVGTPVEIERARFLLTPTTNDPQALYLTLELQGFGGSQNDEAQHGVARTA----RDDAQSQLLEKP 208
            MDLAMMLSADKR++ + PPYV     ++    PHKRAR D   T LPSQ+   PRDS   +       A+SPYSEL+KAVHNALESR PALTTADKVALALEVLRARQLELDLAQARSNIEALV+NSG APRTLRAVIPSTAVKGLPVGTPV+IERARFLLTPTTNDPQAL+LTLELQ FGG+   + Q  V  T      ++ QSQ L+ P
Sbjct:    1 MDLAMMLSADKREEASSPPYVAAPPTSDQPSHPHKRARTDAPVTPLPSQQTAQPRDSPTAAXXXXXXXASSPYSELRKAVHNALESRAPALTTADKVALALEVLRARQLELDLAQARSNIEALVNNSGTAPRTLRAVIPSTAVKGLPVGTPVDIERARFLLTPTTNDPQALFLTLELQSFGGASQPQQQQQVHHTLPNGNHNETQSQTLDTP 212

[Close]

BLAST of Ggra1321.t1 vs. uniprot
Match: R7QGC3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC3_CHOCR)

HSP 1 Score: 183 bits (465), Expect = 1.370e-54
Identity = 114/198 (57.58%), Postives = 139/198 (70.20%), Query Frame = 0

Query:    1 MDLAMMLSADKRDDTNPPPYVGPATATE-PVPLPHKRARLDTNATTL----PSQKLQPPRDSA----------MPSASSPAP--PAASPYSELQKAVHNALESRTPALTTADKVALALEVLRARQLELDLAQARSNIEALVSNSGAAPRTLRAVIPSTAVKGLPVGTPVEIERARFLLTPTTNDPQALYLTLELQGFG 181
            MDLAMMLS DKR+DT     + PA  +E PVP   KRAR++   ++L    P     PP  S           +P +S+P P  PA  PY +LQ+AVHNALE +T  LTT+DKVALALEVLRARQLELDLAQAR+NIEALV+ +   PRTLRAVIP++ VKGLPVG P++I   +FLL+PT NDPQAL+LTL+LQ FG
Sbjct:    1 MDLAMMLSGDKREDT-----IAPAPVSEGPVP---KRARVELRHSSLSPDRPRVHADPPPTSVQLDARKTPPPVPVSSAPRPDGPAVGPYFDLQQAVHNALEGKTATLTTSDKVALALEVLRARQLELDLAQARNNIEALVTKASTTPRTLRAVIPASTVKGLPVGFPIDISNGKFLLSPTHNDPQALFLTLDLQSFG 190

The following BLAST results are available for this feature:

BLAST of Ggra1321.t1 vs. uniprot

BLAST of Ggra1321.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J2R8	9.270e-84	68.87	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QGC3	1.370e-54	57.58	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..210

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000092_pilon	contig	tig00000092_pilon:99896..100528 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1321.t1	Ggra1321.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000092_pilon 99896..100528 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1321.t1 ID=Ggra1321.t1|Name=Ggra1321.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MDLAMMLSADKRDDTNPPPYVGPATATEPVPLPHKRARLDTNATTLPSQK
LQPPRDSAMPSASSPAPPAASPYSELQKAVHNALESRTPALTTADKVALA
LEVLRARQLELDLAQARSNIEALVSNSGAAPRTLRAVIPSTAVKGLPVGT
PVEIERARFLLTPTTNDPQALYLTLELQGFGGSQNDEAQHGVARTARDDA
QSQLLEKPVE*