Ggra1320.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra1320.t1 vs. uniprot
Match: A0A2V3J232 (Ribosome assembly factor mrt4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J232_9FLOR) HSP 1 Score: 376 bits (966), Expect = 7.380e-131 Identity = 185/220 (84.09%), Postives = 203/220 (92.27%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQL 220
MGRSKRERIV LTKTRKHVIGKK+KQDLLEAIRNDIDQ+EHIYVFST+NMRNAKLKQLR++WNDS FFFGRKKIAQ+ALGRSPEEEY++GL ++SK+LVGNVGLLFTNR H V+ FF Y EDEFARSGFVATE V L +G LEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVC+KGDVLTPERAK LEFL +RMAKFR++LLCHYRKSD SFE+L
Sbjct: 1 MGRSKRERIVTLTKTRKHVIGKKRKQDLLEAIRNDIDQYEHIYVFSTENMRNAKLKQLRATWNDSRFFFGRKKIAQVALGRSPEEEYSEGLGKLSKRLVGNVGLLFTNRAHKDVISFFREYCEDEFARSGFVATEDVHLTKGPLEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCSKGDVLTPERAKALEFLHVRMAKFRVKLLCHYRKSDASFEEL 220
BLAST of Ggra1320.t1 vs. uniprot
Match: A0A7S1ETJ0 (Ribosome assembly factor mrt4 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETJ0_9RHOD) HSP 1 Score: 234 bits (597), Expect = 1.100e-74 Identity = 120/220 (54.55%), Postives = 157/220 (71.36%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQL 220
M RSKR+RIV+L+KT KHVIG++ K L+E IR +D+++ IYVFS +MRNAKLK+LR W DS FF GR K+ Q+ALG+ E+A+ L V+K+L G+VGLLFTNR+H QV +FF SYS +FARSG A E V L GAL F +Q L+ + +PV L KGVI L+ DFTVC ++LTPE+AK+LE LG + A+F+L LL H+ K+ G FE L
Sbjct: 1 MPRSKRQRIVSLSKTGKHVIGREGKHGLIEEIRECVDKYDSIYVFSYQDMRNAKLKELRVEWRDSRFFLGRNKLLQVALGKDAATEHAENLNLVAKRLSGDVGLLFTNREHTQVKEFFESYSASDFARSGARAIETVTLNAGALTQFVASQNDQLQALGMPVQLSKGVIELMGDFTVCEMNEILTPEKAKILELLGYKHAQFKLNLLAHWSKNKG-FETL 219
BLAST of Ggra1320.t1 vs. uniprot
Match: Q4KTI9 (Ribosome assembly factor mrt4 n=1 Tax=Suberites domuncula TaxID=55567 RepID=Q4KTI9_SUBDO) HSP 1 Score: 224 bits (571), Expect = 1.070e-70 Identity = 109/220 (49.55%), Postives = 159/220 (72.27%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQL 220
M +SKR R++ L+KTR G + K LL+ IR+ +D++ +++V+S DNMRNAKLK LR+ W DS FFFG+ ++ Q+ALGRS +EY GL VS+QL G VGL FTN +V K+F ++SE+++ARSGF++TE++ EG L F N E LR++ LP LKKG +TL +D+TVC +GDVL+PE+A++L+ L I+MA F++ L+C + +DGSF Q+
Sbjct: 1 MPKSKRNRVLTLSKTRSK--GHELKSGLLQEIRDSVDKYANLFVYSIDNMRNAKLKDLRTEWKDSRFFFGKNRVMQLALGRSESDEYKTGLHYVSEQLNGAVGLFFTNEPTEKVEKWFDNFSENDYARSGFISTEEIVCSEGPLTQFTHNMEPQLRKLGLPTALKKGEVTLREDYTVCTEGDVLSPEQARILKLLDIKMASFKVNLICVW-SNDGSFVQM 217
BLAST of Ggra1320.t1 vs. uniprot
Match: mRNA turnover protein 4 homolog isoform X1 n=2 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2C76E (mRNA turnover protein 4 homolog isoform X1 n=2 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2C76E) HSP 1 Score: 223 bits (568), Expect = 3.800e-70 Identity = 110/220 (50.00%), Postives = 155/220 (70.45%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQL 220
M RS+R++ V+LTKT K G + KQ+L+E +R +D +++++VFS +NMRN KLK +RS+W S FFFG+ K+ +ALG+ P +EY DGL +VSKQL G VGLLFTNR +V+++F Y+E +FAR+G VAT V L G L F + E LRQ+ LP LKKGV+TLL D+ VC +G LTPE+A++L+ LG+ MA F++ + C + +G FEQL
Sbjct: 1 MPRSRRDKRVSLTKTTKK--GLQVKQNLIEELRKCVDTYKNLFVFSVENMRNNKLKDMRSAWKHSRFFFGKNKVMMVALGKEPADEYKDGLHKVSKQLQGEVGLLFTNRTKVEVIEWFEQYTESDFARAGNVATMAVTLDAGPLPQFTHSLEPQLRQLGLPTSLKKGVVTLLSDYDVCKEGASLTPEQARLLKLLGVEMATFKVTINCMWNSENGEFEQL 218
BLAST of Ggra1320.t1 vs. uniprot
Match: A0A8I6RK59 (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RK59_CIMLE) HSP 1 Score: 221 bits (564), Expect = 1.590e-69 Identity = 113/218 (51.83%), Postives = 152/218 (69.72%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFE 218
M +SKR++ V+LTKT K G + K L+E IR ++Q+++I+VFS +NMRN KLK LR WNDS FFFG+ K+ + LGR E+E D L ++S +L G GLLFTNR + V KFF +Y E ++ARSGFVATE V + EG L F + E LRQ+ LP LKKGV+TLL D VCN+GDVLTPE+A++L+ L RMA+F++ L+C + K G F+
Sbjct: 1 MPKSKRDKKVSLTKTTKK--GLQAKHSLVEQIRKSVEQYKNIFVFSVENMRNGKLKNLRGDWNDSRFFFGKNKVMTLGLGRKKEDEVEDNLHKLSAKLKGQCGLLFTNRSNDDVTKFFDTYLEKDYARSGFVATETVVVPEGPLPEFPHSMEPQLRQLGLPTSLKKGVVTLLTDHKVCNEGDVLTPEQARILKLLDNRMAQFKISLICMWSKG-GMFK 215
BLAST of Ggra1320.t1 vs. uniprot
Match: A0A401PAH6 (Ribosome assembly factor mrt4 n=5 Tax=Galeoidea TaxID=119195 RepID=A0A401PAH6_SCYTO) HSP 1 Score: 221 bits (563), Expect = 2.320e-69 Identity = 110/220 (50.00%), Postives = 153/220 (69.55%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQL 220
M RS+R++ V+LTKT K G + KQ+L+E +R +D +++++VFS +NMRN KLK +RS+W S FFFG+ K+ +ALGR P +EY DGL +VSKQL G VGLLFTNR +V+++F Y+E FAR+G +AT V L G L F + E LRQ+ LP LKKGV+TLL D+ VC +G LTPE+A++L+ LG+ MA F++ + C + G FEQL
Sbjct: 1 MPRSRRDKRVSLTKTTKK--GLQIKQNLIEELRKCVDTYKNVFVFSIENMRNNKLKDMRSAWKHSRFFFGKNKVMMVALGREPADEYKDGLHKVSKQLQGEVGLLFTNRTKTEVIEWFDRYTESNFARAGNIATMAVTLDAGPLPQFTHSLEPQLRQLGLPTTLKKGVVTLLSDYDVCKEGASLTPEQARLLKLLGVEMADFKVTINCMWNSETGEFEQL 218
BLAST of Ggra1320.t1 vs. uniprot
Match: R7QI94 (Ribosome assembly factor mrt4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI94_CHOCR) HSP 1 Score: 219 bits (557), Expect = 2.690e-69 Identity = 104/172 (60.47%), Postives = 131/172 (76.16%), Query Frame = 0
Query: 50 MRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQLE 221
MRN LK+LR+ W DS FF GR KI Q+ALGR EEYADGLRQV+ QL GNVGLLFTNR H +V+ FF + D++ARSGF ATE+V+L +G LE F +QE +LR + +P+ LKKG + L +DFTVC G+ LTPE+AK+LEFLG+RMAKFR+ L C+YRK DG F+ L+
Sbjct: 1 MRNTILKKLRTEWRDSRFFMGRNKIMQVALGRDEAEEYADGLRQVATQLTGNVGLLFTNRKHKEVVSFFRKFEADDYARSGFEATEKVELAKGELEMFETSQEHSLRLLGMPIVLKKGKVCLSRDFTVCEGGETLTPEKAKILEFLGVRMAKFRVVLRCYYRKKDGHFKLLD 172
BLAST of Ggra1320.t1 vs. uniprot
Match: mRNA turnover protein 4 homolog n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0005D0CC83 (mRNA turnover protein 4 homolog n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0005D0CC83) HSP 1 Score: 219 bits (558), Expect = 1.940e-68 Identity = 111/215 (51.63%), Postives = 153/215 (71.16%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDG 215
M +SKR++ V+LTKT K G KQ +E IRN I ++EHI++F+ +NMRNAKLK LR+ W+DS FFFG+ K+ +ALG+S +E D L +SK+L G GLL TN+D VL++F SYSE EFAR+GFVAT+ V L G L GF+ E +LR++ LP L+KGVITL++++ VC KG LTPE+A +L+ LG +MAKF++ + CH+ K G
Sbjct: 1 MPKSKRDKKVSLTKTTKK--GLLLKQKTIEEIRNSISKYEHIFLFTVNNMRNAKLKDLRNDWSDSRFFFGKNKVMALALGKSKSDELEDQLNLLSKKLKGQCGLLMTNKDVFDVLEYFKSYSEKEFARAGFVATKDVLLPVGPLTGFSHAIEPHLRRLGLPTSLEKGVITLIKEYQVCKKGSPLTPEQASILKLLGKQMAKFKIVIKCHWSKGKG 213
BLAST of Ggra1320.t1 vs. uniprot
Match: W5MAE0 (Ribosome assembly factor mrt4 n=4 Tax=Lepisosteidae TaxID=7915 RepID=W5MAE0_LEPOC) HSP 1 Score: 219 bits (557), Expect = 2.500e-68 Identity = 106/218 (48.62%), Postives = 152/218 (69.72%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFE 218
M +SKR++ ++LTKT K G + KQ+L+E +R +D + H+++FS NMRN+KLK +R++W S FFFG+ K+ IALG+ P +EY D L +VSK L G VGLLFTN+ +V ++F + E +FAR+G AT V L EG L+ F+ + E LRQ+ LP LKKGV+TLL+D+ VC +GD LTPE+A VL+ LGI++A+FR+ + C + G FE
Sbjct: 3 MPKSKRDKKISLTKTTKK--GLESKQNLIEELRKCVDMYSHLFIFSVANMRNSKLKDIRTAWKHSRFFFGKNKVMMIALGKGPADEYKDNLHKVSKFLRGEVGLLFTNKTKEEVQEYFSHFKEIDFARAGNKATMAVTLDEGPLDQFSHSMEPQLRQLGLPTALKKGVVTLLKDYDVCKEGDTLTPEQATVLKLLGIKLAEFRVTIKCMWNSETGDFE 218
BLAST of Ggra1320.t1 vs. uniprot
Match: K4GJE7 (Ribosome assembly factor mrt4 n=3 Tax=Callorhinchus milii TaxID=7868 RepID=K4GJE7_CALMI) HSP 1 Score: 218 bits (555), Expect = 3.660e-68 Identity = 106/223 (47.53%), Postives = 155/223 (69.51%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRNDIDQFEHIYVFSTDNMRNAKLKQLRSSWNDSTFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHAQVLKFFGSYSEDEFARSGFVATEQVQLKEGALEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCNKGDVLTPERAKVLEFLGIRMAKFRLRLLCHYRKSDGSFEQLEQM 223
M RS+R++ V+LTKT K G + KQ+L+E +R +D ++H+++FS NMRN KLK +R++W S FFFG+ K+ +ALG+ P +EY +GL +VSK+L G VGLLFT+R +V+++F +SE++FARSG AT V L G L F + E LRQ+ LP LKKGV+ LL D+ VC GD+LTPE+A++L+ LG+ MA+F++ + C + G FE+L M
Sbjct: 1 MPRSRRDKKVSLTKTAKK--GLEVKQNLIEELRKCVDTYKHLFIFSIKNMRNNKLKDIRNAWKHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFSENDFARSGNQATMAVTLDAGPLSQFTHSMEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGDILTPEQARLLKLLGLEMAEFKVTISCMWNSETGVFEKLAAM 221 The following BLAST results are available for this feature:
BLAST of Ggra1320.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1320.t1 ID=Ggra1320.t1|Name=Ggra1320.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=227bpback to top |