Ggra1312.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1312.t1
Unique NameGgra1312.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A2V3IHJ2 (Coiled-coil domain-containing protein 25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ2_9FLOR)

HSP 1 Score: 361 bits (926), Expect = 3.160e-125
Identity = 174/210 (82.86%), Postives = 193/210 (91.90%), Query Frame = 0
Query:    1 MVFFYRTRDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKDIRQTYTEYEDDFM 210
            MVF+Y+TRD SYHVYVGKDKYENEELIK+GWDNDVWFHVDKLSSAHVYLRLKDGETI+SIPEGVLEDCVQLVKHNSIEGNKMNN+ VVYTYW+NLKKTGDM+VGQVSFH+VGDVKRI VEKR N+IVNRLNRTK+EAHPD A+EKTNR+K+LN++ARDEMRKKAERE+          EA+SYDRIHQ KDMTSNKDIRQ YTE+E+DFM
Sbjct:    1 MVFYYKTRDDSYHVYVGKDKYENEELIKHGWDNDVWFHVDKLSSAHVYLRLKDGETIESIPEGVLEDCVQLVKHNSIEGNKMNNVGVVYTYWNNLKKTGDMEVGQVSFHKVGDVKRIVVEKRINDIVNRLNRTKSEAHPDFAQEKTNRMKYLNRVARDEMRKKAERERTLREQRQKEKEARSYDRIHQEKDMTSNKDIRQDYTEFEEDFM 210          
BLAST of Ggra1312.t1 vs. uniprot
Match: R7Q8X9 (NFACT-R_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8X9_CHOCR)

HSP 1 Score: 294 bits (753), Expect = 7.070e-99
Identity = 148/210 (70.48%), Postives = 170/210 (80.95%), Query Frame = 0
Query:    1 MVFFYRTRDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKDIRQTYTEYEDDFM 210
            MVF+Y+T D SY VYVGKDK+ENE+LI +GW+NDVWFHVDKLSSAHVYLRLKDGETIDSIPE VLEDCVQLVKHNSIEGNKM+N+ +VYTYWSNLKKTGDM VGQVSFH V  VKR  V+KR NEIVNRLNRTKTEA PDLA +KT RIK LN+ AR+ ++ + E EK          EA SYD IH+ + M+SNK+    +TE+EDDFM
Sbjct:    1 MVFYYKTCDDSYLVYVGKDKHENEQLIAHGWENDVWFHVDKLSSAHVYLRLKDGETIDSIPESVLEDCVQLVKHNSIEGNKMSNVGIVYTYWSNLKKTGDMAVGQVSFHNVKAVKRCKVDKRVNEIVNRLNRTKTEAFPDLAAQKTARIKELNRRAREALKHQKEAEKALREQRMKEKEALSYDNIHKEEKMSSNKEFFGNHTEFEDDFM 210          
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A7S3ELZ8 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELZ8_9RHOD)

HSP 1 Score: 262 bits (669), Expect = 4.250e-86
Identity = 131/210 (62.38%), Postives = 155/210 (73.81%), Query Frame = 0
Query:    1 MVFFYRTRDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKDIRQTYTEYEDDFM 210
            MVFFY T D S+ VY G+DK+ENEELIKYGWD DVWFHVDKLSSAHVYLRLKD  T+D IPE VL DC QLVKHNSIEGNK NN+ VVYT WSNLKKTGDMDVGQV F+    V++ITV KR NEIVNRLN+TK E  P LA EK  R+K + +   ++ R++   EK           A+SYDRIH+ +DMT+NK+    Y +YE++FM
Sbjct:    1 MVFFYTTVDESFIVYCGRDKHENEELIKYGWDEDVWFHVDKLSSAHVYLRLKDDMTLDDIPEQVLTDCAQLVKHNSIEGNKQNNVGVVYTMWSNLKKTGDMDVGQVGFYDQKAVRKITVAKRENEIVNRLNKTKREEFPKLADEKEKRLKEVQRRIHEQARQREREEKKLREQQQAEKAARSYDRIHKEEDMTTNKEYEGDYNQYEEEFM 210          
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A068V8A8 (NFACT-R_1 domain-containing protein n=2 Tax=Coffea TaxID=13442 RepID=A0A068V8A8_COFCA)

HSP 1 Score: 218 bits (556), Expect = 7.310e-69
Identity = 119/217 (54.84%), Postives = 148/217 (68.20%), Query Frame = 0
Query:    1 MVFFYRTRDSS--YHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEK--TNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKDI---RQTYTEYEDDFM 210
            MVF+++ R  +  Y +++G DKYENEELIKYG+  DVWFHVDK+SSAHVYLRL  G+T D IPEGVLEDC QLVK NSI+GNK+NN+ VVYT W NLKKT  MDVGQV FH    V+ + VEKR NEIVNRLNRTK E  PDL  E+   N ++   +  ++++R+K  RE+          + +SY  +     MTSNKDI    +T  E EDDFM
Sbjct:    1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDVWFHVDKMSSAHVYLRLHKGQTFDDIPEGVLEDCAQLVKANSIQGNKVNNVDVVYTPWHNLKKTASMDVGQVGFHNSKMVRTVKVEKRINEIVNRLNRTKVERKPDLKAEREAVNAVERAER--KNQLREKKRREEMERLEKERQADLRSYKNLMVADKMTSNKDIASGHKTLQELEDDFM 215          
BLAST of Ggra1312.t1 vs. uniprot
Match: G1P7R4 (Coiled-coil domain-containing protein 25 n=8 Tax=Myotis TaxID=9434 RepID=G1P7R4_MYOLU)

HSP 1 Score: 217 bits (553), Expect = 1.660e-68
Identity = 111/194 (57.22%), Postives = 138/194 (71.13%), Query Frame = 0
Query:    4 FYRTRDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKD 197
            F     S+Y +Y+GKDKYENE+LIKYGW  D+WFHVDKLSSAHVYLRL  GE I+ IP+ VL DC QLVK NSI+G KMNN+ VVYT WSNLKKT DMDVGQ+ FHR  DVK +TVEK+ NEI+NRL +TKTE  PDLA EK  R +      + ++++   REK    X     E +SY  + + ++M+SN+D
Sbjct:    7 FVLVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKDVLMDCAQLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKTERFPDLAAEKECRDREERNEKKAQIQEMKRREKEEMKXKREMDELRSYSSLMKAENMSSNQD 200          
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A2Z7ASR3 (Coiled-coil domain-containing protein 25 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7ASR3_9LAMI)

HSP 1 Score: 216 bits (551), Expect = 4.190e-68
Identity = 118/215 (54.88%), Postives = 144/215 (66.98%), Query Frame = 0
Query:    1 MVFFYRTRDSS--YHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKDIRQT---YTEYEDDFM 210
            MVF+++ R  S  Y +++G DKYENEELIKYG+  D+WFHVDK+SSAHVYLRL  G+TID IPEGVLEDCVQLVK NSI+GNK+NNI VVYT W NLKKT  M++GQV FH    V+ + VEKRANE VNRLNRTK E  PDL  E+           + ++R K  R++          E +SY  +   + MTSNKDI  T     E E+DFM
Sbjct:    1 MVFYFKARPDSGDYTIFMGLDKYENEELIKYGFIEDIWFHVDKMSSAHVYLRLHKGQTIDDIPEGVLEDCVQLVKANSIQGNKVNNIDVVYTPWQNLKKTPSMEIGQVGFHNTKMVRTVRVEKRANETVNRLNRTKVERTPDLKAEREAVNAAERSERKQQLRDKKRRDELDKVEKERQAELRSYKNLMVAEKMTSNKDIASTNKSLQELEEDFM 215          
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A6J2M6Q3 (Coiled-coil domain-containing protein 25 n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A6J2M6Q3_9CHIR)

HSP 1 Score: 216 bits (550), Expect = 4.740e-68
Identity = 111/200 (55.50%), Postives = 143/200 (71.50%), Query Frame = 0
Query:    1 MVFFYRT---RDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKD 197
            MVF++ +     S+Y +Y+GKDKYENE+LIKYGW  D+WFHVDK+SSAHVYLRL  GE I+ IP+ VL DC  LVK NSI+G KMNN++VVYT WSNLKKT DMDVGQ+ FHR  DVK +TVEK+ NEI+NRL +TKTE  PDLA EK  R +      + ++++   REK    X     E +SY  + + ++M+SN+D
Sbjct:    1 MVFYFTSSSGNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKISSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVSVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKTERFPDLAAEKECRDREERNEKKAQIQEMKRREKEEMKXKREMDELRSYSSLMKAENMSSNQD 200          
BLAST of Ggra1312.t1 vs. uniprot
Match: S4RF54 (Coiled-coil domain-containing protein 25 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RF54_PETMA)

HSP 1 Score: 216 bits (549), Expect = 6.510e-68
Identity = 122/199 (61.31%), Postives = 149/199 (74.87%), Query Frame = 0
Query:    1 MVFFYRTRDSS--YHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKD 197
            MVF++ +   S  Y +YVGKDKYENEELIKYGW  DVWFHVDKLSSAHVYLRL+ G+T+D IP  VL DC QLVK NSI+GNKMNNIAVVYT W NLKKT DMDVGQV FH+  +V+ +TVEKR NEI+NRLNRT+ E  PDLA E+ +R +      + +++       XXXXXXXXX E +SY  + + ++MTSN+D
Sbjct:    1 MVFYFVSNVGSTPYTIYVGKDKYENEELIKYGWPEDVWFHVDKLSSAHVYLRLQKGQTMDDIPTEVLIDCAQLVKANSIQGNKMNNIAVVYTPWGNLKKTADMDVGQVGFHKQKEVRTVTVEKRVNEIMNRLNRTRDERLPDLASEREDRDREERGEKKAQLQXXXXXXXXXXXXXXXXEELRSYSALMKEENMTSNQD 199          
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A286XV57 (Coiled-coil domain-containing protein 25 n=14 Tax=Eutheria TaxID=9347 RepID=A0A286XV57_CAVPO)

HSP 1 Score: 216 bits (549), Expect = 6.720e-68
Identity = 112/200 (56.00%), Postives = 143/200 (71.50%), Query Frame = 0
Query:    1 MVFFYRT---RDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKD 197
            MVF++ +     S+Y +Y+GKDKYENE+LIKYGW  D+WFHVDK+SSAHVYLRL  GE I+ IP+ VL DC QLVK NSI+G KMNN+ VVYT WSNLKKT DMDVGQ+ FHR  DVK +TVEK+ NEI+NRL +TK E  PDLA EK  R +      + ++++   REK    XX    E +SY  + + ++M+SN+D
Sbjct:    1 MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKISSAHVYLRLHKGEKIEDIPKEVLVDCAQLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLERFPDLAAEKEGRDREERNEKKAQIQEMKRREKEEMKXXREMDELRSYSSLMKAENMSSNQD 200          
BLAST of Ggra1312.t1 vs. uniprot
Match: A0A6I9M7A7 (Coiled-coil domain-containing protein 25 n=3 Tax=Muroidea TaxID=337687 RepID=A0A6I9M7A7_PERMB)

HSP 1 Score: 216 bits (549), Expect = 6.720e-68
Identity = 112/200 (56.00%), Postives = 144/200 (72.00%), Query Frame = 0
Query:    1 MVFFYRT---RDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLRLKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGDMDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIKHLNKIARDEMRKKAEREKXXXXXXXXXXEAKSYDRIHQPKDMTSNKD 197
            MVF++ +     S+Y +Y+GKDKYENE+LIKYGW  D+WFHVDKLSSAHVYLRL+ GE I+ IP+ VL DC  LVK NSI+G KMNN+ VVYT WSNLKKT DMDVGQ+ FHR  DVK +TVEK+ NEI+NRL +TK+E  PDLA EK  R +      + ++++   REK    XX    E +SY  + + ++M+SN+D
Sbjct:    1 MVFYFTSCSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKSEKFPDLAAEKEGRDREERNEKKAQIQEMKRREKEEMKXXREMDELRSYSSLMKVENMSSNQD 200          
The following BLAST results are available for this feature:
BLAST of Ggra1312.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHJ23.160e-12582.86Coiled-coil domain-containing protein 25 n=1 Tax=G... [more]
R7Q8X97.070e-9970.48NFACT-R_1 domain-containing protein n=1 Tax=Chondr... [more]
A0A7S3ELZ84.250e-8662.38Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A068V8A87.310e-6954.84NFACT-R_1 domain-containing protein n=2 Tax=Coffea... [more]
G1P7R41.660e-6857.22Coiled-coil domain-containing protein 25 n=8 Tax=M... [more]
A0A2Z7ASR34.190e-6854.88Coiled-coil domain-containing protein 25 n=1 Tax=D... [more]
A0A6J2M6Q34.740e-6855.50Coiled-coil domain-containing protein 25 n=6 Tax=B... [more]
S4RF546.510e-6861.31Coiled-coil domain-containing protein 25 n=2 Tax=P... [more]
A0A286XV576.720e-6856.00Coiled-coil domain-containing protein 25 n=14 Tax=... [more]
A0A6I9M7A76.720e-6856.00Coiled-coil domain-containing protein 25 n=3 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..194
NoneNo IPR availablePANTHERPTHR13049:SF2COILED-COIL DOMAIN-CONTAINING PROTEIN 25coord: 1..210
IPR008532NFACT, RNA-binding domainPFAMPF05670NFACT-R_1coord: 1..109
e-value: 6.1E-41
score: 139.5
IPR039730Jlp2/Ccd25PANTHERPTHR13049DUF814-RELATEDcoord: 1..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:73691..74323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1312.t1Ggra1312.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 73691..74323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1312.t1 ID=Ggra1312.t1|Name=Ggra1312.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MVFFYRTRDSSYHVYVGKDKYENEELIKYGWDNDVWFHVDKLSSAHVYLR
LKDGETIDSIPEGVLEDCVQLVKHNSIEGNKMNNIAVVYTYWSNLKKTGD
MDVGQVSFHRVGDVKRITVEKRANEIVNRLNRTKTEAHPDLAKEKTNRIK
HLNKIARDEMRKKAEREKEHREQRQKEKEAKSYDRIHQPKDMTSNKDIRQ
TYTEYEDDFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008532NFACT_RNA-bd
IPR039730Jlp2/Ccd25