Ggra1310.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1310.t1
Unique NameGgra1310.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length796
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1310.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..138
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..795
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:68862..71249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1310.t1Ggra1310.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 68862..71249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1310.t1 ID=Ggra1310.t1|Name=Ggra1310.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=796bp
MSLGTHVTLAVLAFCVIVGEPSHAGEHTPTHTVGLQNAEQTSQAVSPSLI
VPFLVGLVVPCVLKLLLDYLAQFSEVRPVNTALLYAQIAVYIVAHYISLF
IGVGTLLFAAVERPQNFADLACGAIGCLASMYSFDFTLTAASKFRKIWCC
KQFVSLPPRTRRLLPNTLKKLIHIASGSDSCTELPFSQFLQLVVFSLQLA
DEQLLHNILDASCSGPTARRLAHLVKRLPSFRRALQTKNRFVFDAFALPA
REATRPDSPNSVSFSERVDLATYFLKLQDKELLDTLFHPSIGSTSTCAAK
LRQLYDRVVDPNNFSDVGRGYLLPDTLNKLIHVANRSDSCTELPFSQFLQ
LVEFSLQLADEQILHNILDASCSGPTARRLAHLVKRLPSFRRALQTKNRF
VFDAFALPAREATRPDSPNSVSFSERVDLATYFLKLQDKELLDTLFHPSI
GSTSTCAAKLRQLYDRVVDPNGFSDVGRGYLLPDTLNKLIHVANRSDSCT
ELPFSQFLQLVEFCLQLADEQILHNILDASCSGPTARRLAHLAKRLPSFR
RALQTKNRFVFDAFALPAREATRPDSPNSVSFSERVDLATYFLKLQDTEL
LDTLFHPSIGSTSTCAAKLRQLYDRVVDPNNFSDKGRGYLPVALKDLLLS
MSAENHSTTLAFAVQVELIMLYLKLVGKKLSDNQVCMELGCVEDQEREMR
VCDGEEGPWIRYWVQRFDGTLKATGRFGPSPVDIMKLAEEPPRFLLPASL
EQDIIRLVLLLYARIASAGSSDGDSSHMNVYHQIMQQEGEQVFAY*
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