Ggra1308.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1308.t1
Unique NameGgra1308.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1020
Homology
BLAST of Ggra1308.t1 vs. uniprot
Match: A0A2V3IHQ5 (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ5_9FLOR)

HSP 1 Score: 962 bits (2488), Expect = 0.000e+0
Identity = 598/988 (60.53%), Postives = 709/988 (71.76%), Query Frame = 0
Query:   21 STRLMRSPSPRVAARSSVSASINWPALSRRANATLANLRSTVDASSFERALRARISRDAHNPFLWHALAKHLAVERANVDAAVAVLHTAVRRVPVGCRGGLYEAWGTMEHRRGNSHLALRIYADAVHTDPYAALSVSLSVIQLKLQLIDDARQTLSHASQTFPNYAPIWRAWAYLETQHGQLQHAIHKWRMALQKDPTNPRVWSSFIAVERRTGASNTRIVPLLTEAISHCPKDAILRITLAHIEERRKSPRAARAILFPIHNQNNVQVLRQLGRIDFGTADIESGRAFFRRAADLEAAAATDVKNGKRRTKRRTVKSLHAWAHMETKSGHYDHAKALLQEAVSVCDTDAGVWRAIAEIESRNHNYEKARDAFKKALALDPHDPRLILSYGRTEALAGNLRRAEALVESVAKMATKRDLSLFSATTRNDSSVDDISEEDFGSGRVQSSHSDNEESKDMTLTPTTLATTLKESAMLAARDGRLDDSISLLKRATEVNPSAEGVWRLLANHVIQRHGMDQARDVYEKALRKVDNATRPKVLHWWGQDERTAGNIEQARELFIQATEANPRYMSAWISWXXXXXXXXXXXXXXXXXEKAAILAERERIKAPYLFQTWGRIEELQRGRADLAAEIFARGVRIAPRSGSLWGSWGLLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLGNVARGRELFERAVQSDPQHAPAWHAWGCLELNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEHNKNDGEALKYWKKALSVAPGHAMTYQSWGVFLARRGRLDEARVVFQSGIDKAQWRGADRAMLLQAWACEEQKSQREETAQELLGRSIEADERRAESWVLLASLAEKRGLKAEARELYDRGAKAAAGSAAMGSLYVSWGRFEVRDEEIERAREVFERGVKACPSNGDVWRAYAAFEERSGNVYRAKQIEHKIGRLF 1008
            S+RL RS S + A+R++V+ASINWPALSRRANATL+NLRSTVD+ SFE ALRARI++D  NPFLWHALAKHLA++R +V+AA++VL TA+RRVP G RGGL+EAWGTMEHRRGNSHLALRIYADA+HTDPYAAL VSL+VIQLKL LIDDAR+TL  AS  FP+YAPIWRAWAYLETQHG +Q                       I  ERR+GAS TR+  LL +AIS+CPK+  L ++LA +EE+RK  RAARA+LFP+H Q+++QVLRQLGRIDF T + +SGRAFFRRAAD+E+A+ATD +NGKRRTKRRTVKSLHAWAHME ++ H + AKALLQEA+SVC+TD+GVWRA+AEI                                            E+L+ESV+KM + R   LFS   + ++  D+I E+D  + R ++S SD E+S+DMTLTP  LATTLKE AMLA RDGRLDDSISLL RATEVNPSAE  WRLLA H I+RHGM  AR VY+KAL+KV+    PKVLHWWGQDERTAG+I++AR+LF++ATE NPRYM+ W+SW                 E+AA  AE E IKAPYLFQTWGRIEELQRGR D AAEIF+RGVRIAP SGSLWGSWGLLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGK++GNVA+GR+                   GCLE+N G                    XXXXXXXX  AEHN N+ EA+K WKKAL  +PGH++TYQSW VFLAR+GR+  +R +F+ GI+KA  R                                 AD+RRAESW LLA LA +RGL+ EARELY  G  AA+GS ++  LY+SWG  E  D E++RAREVFE G+  CPSN ++W+AYAAFEE+ GN  RAK++E +I RLF
Sbjct:    6 SSRLTRSSSSKFASRAAVAASINWPALSRRANATLSNLRSTVDSPSFESALRARIAQDDQNPFLWHALAKHLAIDRTDVNAAISVLQTAIRRVPPGSRGGLFEAWGTMEHRRGNSHLALRIYADALHTDPYAALFVSLAVIQLKLHLIDDARRTLRDASVAFPSYAPIWRAWAYLETQHGPIQXXXXXXXXXXXXXXXXXXXXXXXINAERRSGASQTRLATLLNDAISNCPKNTQLHLSLARVEEKRKGFRAARAVLFPLHTQDDLQVLRQLGRIDFETRNFDSGRAFFRRAADIESASATDFRNGKRRTKRRTVKSLHAWAHMEVRTAHTNRAKALLQEAISVCETDSGVWRAVAEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLIESVSKMGSNRKTPLFSTGLKENAVADEIFEDDTSASRFKASQSDEEDSRDMTLTPHMLATTLKERAMLAFRDGRLDDSISLLNRATEVNPSAEANWRLLAAHTIRRHGMPHARAVYQKALKKVNPRCVPKVLHWWGQDERTAGHIDEARQLFVKATENNPRYMAPWVSWGLLEKSQNNLERACKIFEEAATRAEEEGIKAPYLFQTWGRIEELQRGRPDAAAEIFSRGVRIAPGSGSLWGSWGLLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEIGNVAKGRDXXXXXXXXXXXXXXXXXXXGCLEMNAGNIVRAKELLSKASQVRKDDPXXXXXXXXLEAEHNDNEREAIKNWKKALDASPGHSLTYQSWAVFLARKGRMGYSREIFKEGIEKAGSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKRRAESWQLLAGLARRRGLRDEARELYRSGVYAASGSPSLPLLYLSWGSLEAEDGEVKRAREVFESGINKCPSNRELWKAYAAFEEQRGNPSRAKELEEEIERLF 993          
BLAST of Ggra1308.t1 vs. uniprot
Match: R7QNZ1 (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNZ1_CHOCR)

HSP 1 Score: 463 bits (1192), Expect = 1.580e-145
Identity = 376/805 (46.71%), Postives = 509/805 (63.23%), Query Frame = 0
Query:  227 IAVERRTGASNTRIVPLLTEAISHCPKDAILRITLAHIEERRKSPRAARAILFPIHNQNNVQVLRQLGRIDFGTADIESGRAFFRRAADLEAA---------AATDVKNGKRRTKRR--TVKSLHAWAHMETKSGHYDHAKALLQEAVSVCDTDAGVWRAIAEIESRNHNYEKARDAFKKALALDPHDPRLILSYGRTEALAGNLRRAEALVESVAKMATKRDLSLFSATTRNDSSVDDISEEDFGSG-----------RVQSSHSDNEESKDMTLTPTTLATTLKESAMLAARDGRLDDSISLLKRATEVNPSAEGVWRLLANHVIQRHGMDQARDVYEKALRKVDNATRPKVLHWWGQDERTAGNIEQARELFIQATEANPRYMSAWISWXXXXXXXXXXXXXXXXXEKAAILAERERIKAPYLFQTWGRIEELQRGRADLAAEIFARGVRIAPRSGSLWGSWGLLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLGNVARGRELFERAVQSDPQHAPAWHAWGCLELNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEHNKNDGEALKYWKKALSVAPGHAMTYQSWGVFLARR-GRLDEARVVFQSGIDKAQWRGADRAMLLQAWACEEQKSQREETAQELLGRSIEADERRAESWVLLASLAEKRGLKAEARELYDRGAKAAAGSAAMGSLYVSWGRFEVRDEEIERAREVFERGVKACPSNGDVWRAYAAFEERSGNVYRAKQIEHKIGRLF 1008
            +  E +   S   +V LL EA+  CPKD  LR+ LA +EERR    AARA+L P+    +  +LR + +++    D E  RA++R+AAD EA           +  V   KR+  R+  TVKSLHAWA ME + G+   A+ +L+EA ++ + D+ +WRAI E+E R+                                LAG+L RAE L++ VA    K      +A T   S    +     G+            R Q++ ++N    ++ LTP  LA  L+E A+LAAR+G+LDDS++LL RA+++ P     WRLLA+  ++  G+  AR+VY   L++V  + +PK+LHWWGQDER+AG+I+ ARE F  AT AN  YMSAW+SW                 E+A+  AER+ +++P++FQ WGR+EEL+RGRA+ A++IF RG  + P SG LW +WGLLE RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K+LGN++R R+LFERAV +DP  APAWHAWGCLE+  G XXXXXXXXXXXXXXXXXXXXXXXXXXXX +EH  +   A+K+WK+A+ V PGHA++YQ+W +    + G L+EAR +F+  + +A+ + AD AMLLQ+WA  E++    + A++LL + +E D RRAE+W  LA + + RG +  A+ L   G ++ +  +   +LYV W + E  +  I  AR++F  GV+  PSN   W AYAA E + G+  RA +I+   G LF
Sbjct:    3 VKYEDKCTTSVPHMVDLLYEAVLACPKDVSLRLHLAKLEERRSGLAAARAVLKPVGAAPDDNILRAMAKLETDARDHEKARAYYRQAADAEALQSGNSSPYNTSAPVSPPKRKPTRKGKTVKSLHAWALMEARLGNLTAAREILEEAKAITEHDSAIWRAIGELEGRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGDLDRAEMLIDRVANAGPKG-----TAPTLAPSQTQKMMPSGGGTSASRATANPKPSRFQNNINNN---TNVALTPHLLADALRERAILAARNGQLDDSVTLLTRASQIEPDCATGWRLLASQQLRVKGIVSAREVYRTGLQRVAQSAKPKLLHWWGQDERSAGDIDAARERFRLATCANSDYMSAWMSWGLLEKSEGNIAEACDIFEQASKRAERDLVRSPFIFQAWGRVEELERGRAEYASQIFRRGTNLVPTSGPLWSAWGLLEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKELGNISRSRDLFERAVTADPYFAPAWHAWGCLEMTAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXESEHRHDHKAAIKHWKRAIEVEPGHALSYQAWALLEGNKNGNLEEARRLFEYAMQEAKLKQADMAMLLQSWASLEEQHGEFDQARKLLRKGLEVDRRRAETWQSLALVEKARGNREVAKRLLADGVESTSPLSGAATLYVIWAKMEAEEGNIGEARDLFAAGVRVNPSNVKTWNAYAAAENKYGDASRAAEIKSTCGALF 799          
BLAST of Ggra1308.t1 vs. uniprot
Match: A0A7S0BGE2 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGE2_9RHOD)

HSP 1 Score: 210 bits (534), Expect = 2.670e-52
Identity = 321/952 (33.72%), Postives = 442/952 (46.43%), Query Frame = 0
Query:   62 VDASSFERALRARISRDAHNPFLWHALAKHLAVERANVDAAVAVLHTAVRRVPVGCRGGLYEAWGTM--EHRRGNSHLALRIYADAV-HTDPYAALSVSLSVIQLKLQLIDDARQTLSHASQTFPNYAPIWRAWAYLETQHGQLQHAIHKWRMALQKDPTNPRVWSSFIAVERRTGASNTRIVPLLTEAISHCPKDAILRITLAHIEERRKSPRAARAILF-------PIHNQNNVQVLRQLGRIDFGTADIESGRAFFRRAADLEAAAATDVKNGKRRTKRRTVKSLHAWAHMETKSGHYDHAKALLQEAVSVCDTDAGVWRAIAEIESRNHNYEKARDAFKKALALDPHDPRLILSYGRTEALAGNLRRAEALVESVAKMATKRDLSLFSATTRNDSSVDDISEEDFGSGRVQSSHSDNEESKDMTLTPTTLATTLKESAMLAARDGRLDDSISLLKRATEVNPSAEGVWRLLANHVIQRHGMDQARDVYEKALRKVDNATRPKVLHWWGQDERTAGNIEQARELFIQATEANPRYMSAWISWXXXXXXXXXXXXXXXXXEKAAILAERERIKAPYLFQTWGRIEELQRGRADLAAEIFARGVRIAPRSGSLWGSWGLLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLGNVARGRELFERAVQSDPQHAPAWHAWGCLELNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEHNKNDGEALKYWKKALSVAPGHAMTYQSWGVFLARRGR---LDEARVVFQSGIDKAQWRGADRAMLLQAWACEEQKSQREETAQELLGRSIEADERRAESWVLLASLAEKRGLKAEARELYDRGAKAAAGSAAMGSLYVSWGRFEVRDEEIERAREVFERGVKACPSNGDVWRAYAAFEERSGNVYRAKQI 1000
            + A S  +AL + +  +  N +LWH L   +     +   A  V   A+R+   G R  +++A   +  E  R NS + + +  + +   D +  L V+L+    ++   + A +T    ++    +A IWRAW   E + G L  A  KW  A Q  P  PR W ++  +ER+ G        +L E +   P  + +R+ LA + E  + P  AR IL        P     +  VLR LG ++    +++  R ++   AD  A    D +          +K+LHAWA +E K G+   A  +L  A S+   DAG+WRAIAE                                      A    RA  L+E  A  ++ R+ +L     R                RVQ                      L+E A LA R G           AT  +PS    WR LA+  ++  G+   R VYEKALR V ++T PK+ HW G +ER  G+ ++AR  F +A  A+  Y+S W SW                 E+AA +A R+ ++ P+LF TWGR+ + + G  + A  ++ RG+        L+ +WG LE RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Q GNV                 A AWHAWG  E  +GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 L+V   HA++YQS  +  A+       + AR + +        R  D   + Q WA  E  +   + AQ++L  +IE     A+ +   A L   +    EAR L+  GA+A+   +A   +                             SN   W  YAA E   GN+  A+++
Sbjct:   81 ISAESKRQALESGLEYNERNAYLWHMLGM-VYWREGSQGKAETVFAEAIRKCEPGSRAAIFQAKALLLKETSRPNSDMVISLLQEGLTDDDQHGPLYVALANHYEEIGENEMAHKTFEKGARKASKHAAIWRAWGNFEQKQGHLHEAKSKWERATQISPYEPRSWLNYAELERQIGTERVA-GSILREGLKRNPGSSEIRVMLAKVVENLEGPAEARLILQAEIRGAKPGDKNTSGLVLRALGSLEAREGNVDKAREYYSILADRPARFG-DAE---------IIKALHAWALLEVKQGNSKEAGLILGRATSISPRDAGIWRAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQADSRACELLEK-ASQSSAREHTLPMRQYREVK-------------RVQ-------------------CDALREMAALAMRAGDFKLCEERCIIATLKDPSNAHAWRDLADVSMKGDGVAAMRAVYEKALRSVPHSTHPKLYHWLGLEERRFGDPDRARMAFEKAIAADESYISTWTSWALLEKETGNLEESCTIFERAAEVASRKNLRVPFLFMTWGRVLDREMGDIERARGVYRRGLDQNRGFSPLYQAWGQLEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQAGNVXXXXXXXXXXXXXXXXXALAWHAWGAAEFREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXLAVDSKHALSYQSLALLEAKEPHGLGFEVARRILREATTIVNPR--DGWPVWQTWAVLEADAGNMDEAQDILQAAIEEVPNCAQLYQAYAVLKRDKSDYEEARRLFGAGARASPKDSA--PVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSVCWNLYAALEASEGNIDEAERL 982          
BLAST of Ggra1308.t1 vs. uniprot
Match: A0A7S1THR8 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THR8_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 5.390e-11
Identity = 146/307 (47.56%), Postives = 182/307 (59.28%), Query Frame = 0
Query:  557 KVLHWWGQDERTAGNIEQARELFIQATEANPRYMSAWISWXXXXXXXXXXXXXXXXXEKAAILAERERIKAPYLFQTWGRIEELQRGRADLAAEIFARGVRIAPRSGSLWGSWGLLEHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKQLGNVARGRELFERAVQSDPQHAPAWHAWGCLELNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEHNKNDGEALKYWKKALSVAPGHAMTYQSWGVFLARRGR--LDEARVVFQSG 861
            K+ HWWG +ER  GN ++AR+LF  AT   P YMSAW+S XXXXXXXXXXXXXXX  E+ A  A +  +K+P+LFQT                     G++++  S  L          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  GNV+  R+LF++AV  DP+   AW+AW  +E+                                      + G + + ++KAL+  P H ++YQ+W +   R     L EAR +F+ G
Sbjct:    4 KISHWWGIEERKQGNADEARKLFHDATRIEPNYMSAWLSXXXXXXXXXXXXXXXXIFEEGASFAIKHSLKSPFLFQTXXXXXXXX-XXXXXXXXXXXXGLKLSASSAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNKGNVSLARDLFKKAVDVDPKFNGAWNAWAAMEVELRNYNIASDLLHKAMECSPSHDAVALHSFGVLQGKMGSLGSSREAFQKALAADPSHTISYQAWALVEERLNPDGLTEARRLFKEG 309          
The following BLAST results are available for this feature:
BLAST of Ggra1308.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IHQ50.000e+060.53PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
R7QNZ11.580e-14546.71TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S0BGE22.670e-5233.72Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S1THR85.390e-1147.56Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 376..396
NoneNo IPR availablePFAMPF13432TPR_16coord: 563..617
e-value: 0.019
score: 15.6
coord: 879..940
e-value: 0.009
score: 16.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..477
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 9..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..1019
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 152..185
e-value: 340.0
score: 1.5
coord: 370..403
e-value: 2.0E-4
score: 30.7
coord: 520..553
e-value: 360.0
score: 1.3
coord: 800..834
e-value: 15.0
score: 13.5
coord: 336..369
e-value: 96.0
score: 6.3
coord: 766..799
e-value: 260.0
score: 2.5
coord: 663..696
e-value: 12.0
score: 14.2
coord: 186..219
e-value: 16.0
score: 13.2
coord: 590..623
e-value: 46.0
score: 9.1
coord: 697..730
e-value: 270.0
score: 2.4
coord: 556..589
e-value: 200.0
score: 3.5
coord: 486..519
e-value: 69.0
score: 7.6
coord: 907..940
e-value: 48.0
score: 8.9
coord: 944..977
e-value: 180.0
score: 4.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 370..403
score: 11.357901
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 570..602
e-value: 0.57
score: 19.2
coord: 643..675
e-value: 63.0
score: 9.5
coord: 166..198
e-value: 5.2
score: 16.0
coord: 746..778
e-value: 2.9
score: 16.9
coord: 534..568
e-value: 510.0
score: 2.9
coord: 958..990
e-value: 1.3E-9
score: 47.9
coord: 677..709
e-value: 100.0
score: 8.1
coord: 921..956
e-value: 80.0
score: 8.8
coord: 500..532
e-value: 1100.0
score: 0.4
coord: 384..416
e-value: 22.0
score: 12.8
coord: 350..382
e-value: 7.7
score: 15.5
coord: 200..232
e-value: 92.0
score: 8.3
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 371..403
e-value: 8.4E-6
score: 25.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 880..1011
e-value: 2.8E-18
score: 68.1
coord: 628..799
e-value: 7.3E-28
score: 99.6
coord: 60..239
e-value: 7.9E-18
score: 66.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 475..627
e-value: 3.0E-16
score: 61.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 800..876
e-value: 1.0E-7
score: 33.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 241..452
e-value: 1.3E-21
score: 79.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 335..661
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 129..435
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 631..792
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 811..1004
IPR044624Tetratricopeptide-like repeat protein Mbb1-likePANTHERPTHR44917PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107coord: 744..935
coord: 328..429
coord: 491..659
coord: 913..1000
coord: 533..812
coord: 77..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:61665..64724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1308.t1Ggra1308.t1Gracilaria gracilis GNS1m malemRNAtig00000092_pilon 61665..64724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1308.t1 ID=Ggra1308.t1|Name=Ggra1308.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1020bp
MCAFLVSAPPARAALRRAMPSTRLMRSPSPRVAARSSVSASINWPALSRR
ANATLANLRSTVDASSFERALRARISRDAHNPFLWHALAKHLAVERANVD
AAVAVLHTAVRRVPVGCRGGLYEAWGTMEHRRGNSHLALRIYADAVHTDP
YAALSVSLSVIQLKLQLIDDARQTLSHASQTFPNYAPIWRAWAYLETQHG
QLQHAIHKWRMALQKDPTNPRVWSSFIAVERRTGASNTRIVPLLTEAISH
CPKDAILRITLAHIEERRKSPRAARAILFPIHNQNNVQVLRQLGRIDFGT
ADIESGRAFFRRAADLEAAAATDVKNGKRRTKRRTVKSLHAWAHMETKSG
HYDHAKALLQEAVSVCDTDAGVWRAIAEIESRNHNYEKARDAFKKALALD
PHDPRLILSYGRTEALAGNLRRAEALVESVAKMATKRDLSLFSATTRNDS
SVDDISEEDFGSGRVQSSHSDNEESKDMTLTPTTLATTLKESAMLAARDG
RLDDSISLLKRATEVNPSAEGVWRLLANHVIQRHGMDQARDVYEKALRKV
DNATRPKVLHWWGQDERTAGNIEQARELFIQATEANPRYMSAWISWGLVE
KSRDNLQEASEIFEKAAILAERERIKAPYLFQTWGRIEELQRGRADLAAE
IFARGVRIAPRSGSLWGSWGLLEHRRGNHEKAREMFRAATTAEPSIGSAW
HSWALLECSRCNYEYARQLFKLGHENDGANASLLTSWALLEGKQLGNVAR
GRELFERAVQSDPQHAPAWHAWGCLELNDGNIARAKELLLKASGVKGDEA
AAWHTLGILEAEHNKNDGEALKYWKKALSVAPGHAMTYQSWGVFLARRGR
LDEARVVFQSGIDKAQWRGADRAMLLQAWACEEQKSQREETAQELLGRSI
EADERRAESWVLLASLAEKRGLKAEARELYDRGAKAAAGSAAMGSLYVSW
GRFEVRDEEIERAREVFERGVKACPSNGDVWRAYAAFEERSGNVYRAKQI
EHKIGRLFGARRARASGAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR003107HAT
IPR013105TPR_2
IPR011990TPR-like_helical_dom_sf
IPR044624Mbb1-like