Ggra1305.t2 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1305.t2 vs. uniprot
Match: A0A2V3IHL4 (THO complex subunit 5-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHL4_9FLOR) HSP 1 Score: 783 bits (2022), Expect = 3.220e-279 Identity = 404/602 (67.11%), Postives = 489/602 (81.23%), Query Frame = 0
Query: 1 MASTVSNDEKSMSLLLEGSKHAISTLRDSILVTSRDNALNLMSSSSENGGPKSSESSESHLRGISRSLVTQFVSLKSSHDLLIRQVDNSRKESRKEQDKLLNARSRLDNLKYEMRMLQDEIESCETGSSSHMKKLDLQIPS-APTVEDDGSAKHQHTMDTLSNELLRRKAAQKQLEAVLDVVKLKRKELENTKSALRGLPTLLGSLDNDLKPLRTLIHKKPVKYTTSPTIPEAQQLPAPLYVLTRQAMGYRDSFGDLSVSILGDAPKRPLRKDPYAVHPMRVQIDVHCNGIEQALRVKFSYHVNLNIVSVSSVIVADGTETPSYPTKELQMLYPFDFGEESPNPGNAYLERGTFKFDISKAHGSRPFVWANVVCGITSMLPIESHKARIVDQFQFAKWPSRAMEISGHVRFKDVFETLKSRLKSIVSLKKQIELLLSKSLPVVPAGIGIRTEPKSKLEDFVKLPPQDWAGDERLAREGTGGKYTEVWCMVISREALRINCMIGIEPDYPIGPPVFRLVCDKGSEFVSEMDVLDLERCVNELSGSEKLKGHEELLLGAQIIALLSYLDRLYNVSFGVDDDEIGTQSKVINGRTRSKRSSMMSG 601
M S +S + L LE ++ AIS +RDSI+ +S+ + S++ E +SS+ R +SR L+ F++LK+SHDLLI+QVD +RK SR EQDKLLNARSRLDNL YE +MLQDEI CETG +H++KLD+ IP + +DDG+ HQ TM+ LS ELL+RKAAQK+++++L V K KRKEL++TKSALR LP LL SL NDLKPLR L KP+ +++ + +AQ LPAPLYVL RQA+GY +++G+LSVSI G+ K+ +RKD YA HPMRVQIDV C GI Q+LRVKF YH NL+IVSVSSVIVADGTETPSYPTKELQMLYP+DFGEESP+ GN+YLERG+F+FD++KAHG RPFVWANVVCGITSMLP ES+ AR+ ++ QFAKWP AME+SGH+RFKDV ETL++RLKSIVSLKKQIELLLSK LPV+PA IG+ TEPKSKLEDFVKLPPQDWAGDERLAREGTGG+YTEVWCMVISR++LRINCMIGIEPDYP GPPVFRLVCDKGSE SE DVLDLERCVNE+S SE +KG EELLLGAQI ALLSYLDRLY+VS ++D + ++ +NGR RSKR+S++SG
Sbjct: 1 MTSCLSKLSDDVRLSLEKAQSAISAIRDSIMWSSKTQ-IGFDSTAKE-------QSSQDEFRDMSRKLLGHFITLKTSHDLLIKQVDEARKNSRIEQDKLLNARSRLDNLMYETKMLQDEINLCETGPQAHVQKLDVPIPDFSSQSDDDGARAHQRTMEALSEELLKRKAAQKEVDSILQVAKKKRKELDDTKSALRDLPNLLSSLANDLKPLRALGQNKPMAQSSNTLLSQAQHLPAPLYVLARQAVGYSEAYGNLSVSITGEGSKKQVRKDIYAQHPMRVQIDVLCEGIPQSLRVKFGYHTNLHIVSVSSVIVADGTETPSYPTKELQMLYPYDFGEESPSAGNSYLERGSFRFDVTKAHGCRPFVWANVVCGITSMLPTESYNARLENESQFAKWPVTAMELSGHMRFKDVCETLRTRLKSIVSLKKQIELLLSKRLPVLPADIGLTTEPKSKLEDFVKLPPQDWAGDERLAREGTGGRYTEVWCMVISRDSLRINCMIGIEPDYPFGPPVFRLVCDKGSEIASEKDVLDLERCVNEVSTSENVKGREELLLGAQITALLSYLDRLYDVSSNLEDGDSEGRAMGVNGRARSKRASILSG 594
BLAST of Ggra1305.t2 vs. uniprot
Match: R7QLX8 (THO complex subunit 5 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLX8_CHOCR) HSP 1 Score: 279 bits (714), Expect = 1.330e-82 Identity = 173/515 (33.59%), Postives = 281/515 (54.56%), Query Frame = 0
Query: 61 LRGISRSLVTQFVSLKSSHDLLIRQVDNSRKESRKEQDKLLNARSRLDNLKYEMRMLQDEIESCETGSSSHMKKLDLQIPS-AP--TVEDDGSAKHQHTMDTLSNELLRRKAAQKQLEAVLDVVKLKRKELENTKSALRGLPTLLGSLDNDLKPLRTLIHKKPVKYTTSPTIPEAQQLPAPLYVLTRQAMGYRDSFGD-LSVSILGDAPKRPLRKDPYAVHPMRVQIDVHCN---GIEQALRVKFSYHVNLNIVSVSSVIVADGTETPSYPTKELQMLYPFDFGEESPNPGNAYLERGTFKFDISKAHGSRPFVWANVVCGITSMLPIESHKARIVDQFQFAKWPSRAMEISGHVRFKDVFETLKSRLKSIVSLKKQIELLLSKSLPVVPAGIGIRTEPKSKLEDFVKLPPQDWAGDERLAREGTGGKYTEVWCMVISREALRINCMIGIEPDYPIGPPVFRLVCDKGSEFVSEMDVLDLERCVNELSGSEKLKGHEELLLGAQIIALLSYLDRL 568
+R S+ ++ V K +HD +IR+VD++R+ S+ + L R R L YE +L+ +I++ + + K+ +++P AP E++ H T+ L EL +R+ + +++ ++ K KR +L K LR LP + +L N ++P+R L+ + P + + + LP PLYVLTR+A +R F L++S+L + K + Y HP V++D+ G L+V F +H L++V+V+S I + K LQ+L+P+D GE SPNP N++LE G F FD+SKA G+RPFVWAN++CG+ + ++ V++ A WP+ A H+RFK+ +L++RL V+L+KQ+E L +K +P+ +G EP+++LE F K +D L + + EVW M + L + C +GI +YP G P FRL +K +SE D+L LE+ VN L+ ELLL QI+ LL +D+L
Sbjct: 44 IRRPSQKILAYTVMAKVAHDAIIRKVDSARRNSQADIAMLQKLRQRSACLGYERMLLERQIDAQRAVKAPTVDKVSVKLPHPAPQNASEEESMDVHIDTIKALCAELQKRQRVRDEVDGLVKRTKRKRDQLVTMKDDLRSLPRAVATLRNAIEPVRKLLKVGEELAASPPELAQIRLLPVPLYVLTREAFAFRTMFPKILNISLLEEQAKL---EGVYRPHPRLVRMDIQAGEHIGAGVCLQVFFRFHPELHVVTVTSRIANSEQPSAKMDGKLLQLLFPYDVGETSPNPCNSHLENGAFSFDVSKAGGARPFVWANLLCGLPCLERFDT-----VNEIVGAGWPTEAAGHEAHIRFKETVLSLQNRLCMEVALRKQLEALQAKRMPIQAGDLGFMVEPEARLEMFAKCKSRDEESKNGLGGDNVNVMFREVWEMRVWSGELTMGCDVGIASNYPTGTPCFRLKLEKEQRDISEADMLRLEQKVNMYKMEGDLEDKRELLLSGQILTLLEGVDKL 550
BLAST of Ggra1305.t2 vs. uniprot
Match: M2WT23 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WT23_GALSU) HSP 1 Score: 133 bits (335), Expect = 6.060e-29 Identity = 131/545 (24.04%), Postives = 242/545 (44.40%), Query Frame = 0
Query: 95 KEQDKLLNARSRLDNLKYEMRMLQDEIESCET--GSSSHMKKLDLQIPSAPTVEDDG----SAKHQHTMDTLSNELLRRKAAQKQLEAVLDVVKLKRKELENTKSALRGLPTLLGSLDNDLKPLRTLIHK-----KPVKYTTSPTIPEAQQLPAPLYVLTRQAMGYRDSFGD-----LSVSILGD-----------APKRPLRKDPYAVHPMRVQIDVHC-------NGIEQALRVKFSYHVNLNIVSVS-SVIVADGTETPSYPTKELQMLYPFDFGEESPNPGNAYLERGTFKFDISKAHGSRPFVWANVVCGITSMLPIESHKARIVDQFQFAKWPSRAMEISGHVRFKDVFETLKSRLKSIVSLKKQIELLLSKSLPVVPAGIGIRTEPKSKLEDFVKLPPQDWAGDERLAREGTGGKY-----TEVWCMVISREALRINCMIGIEPDYPIGPPVFRLVCDKGSEFVSEMDVLDLERCVNELSGSEKLKGHE--ELLLGAQIIALLSYLDRLYNVSFGVDDDEIGTQ---SKVINGRTRSK 594
K ++++ N++ L+N Y+ L++EI SC++ G + + L+ S ++G +HQ + L E RR++ ++ L LP + + + T + + ++ LP PLYVL RQA ++ +F + I+GD + + ++ Y +HP++VQ+++ + +++ + V FSY + L IV VS S +DG + T++ L+P D G SPNP N YLE G F+F SK G+RPF+WA ++CG+ P E + + + +W A+ S H+ V + L +R + SL Q+ L +PV + +P+S+L+ + +L ++ A T + T + + I E++ + ++ + PDYP+ P + L C +G + + D+ D+ER + + E L+G+ E LL Q+ L + +D ++ D + + + GR R+K
Sbjct: 85 KHKEQVQNSQIILENYLYQREQLKEEIASCQSYRGLIDEISLITLEEASLSVPSEEGLDSFEYEHQVMLKRLEAEKERRQSLXXXXXXXXXXXXXXXXXXXXSRQFLENLPKEIEKIHVAANRVSTFFFDYGFAGRFFNFLCEDSLKRMFLLPFPLYVLARQAYAFQHTFQSEQHLHFRMDIVGDTVAAESICDAFSTRWKEHENLYQMHPLQVQLELGGQPKGALDSTLQKTVTVTFSYLLCLEIVVVSCSGNASDG----NLITEQFAFLFPGDDGSHSPNPTNHYLEEGKFQFQPSKVGGARPFIWAQIICGLG--FPFELNLSSSTKDAK--EWLQNALNYSKHIVLGAVIKALVARNYFLQSLSTQLVSLQRLIVPVNAKEAQLPGDPRSELKSWSEL-----IDNQEFASGPTNSSFYSLTGTRKFLLEIQSESIHLRGLVAVCPDYPLTSPYWSLKCIRGP--LQDSDLRDIERELCSFT-DENLEGNALGENLLSIQVKKLQACVDICQEINRPSPHDSMIERPRWDRAFRGRMRTK 613
BLAST of Ggra1305.t2 vs. uniprot
Match: THO complex subunit 5 homolog B n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9BDFB (THO complex subunit 5 homolog B n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9BDFB) HSP 1 Score: 81.3 bits (199), Expect = 2.380e-12 Identity = 142/594 (23.91%), Postives = 240/594 (40.40%), Query Frame = 0
Query: 73 VSLKSSHDLLIRQVDNSRKESRKEQDKLLNARSRLDNLKYEMRMLQDEIESCETGSSSH-------MKKLDLQIPSAPTVEDDGSAK-HQHTMDTLSNELLRR-------KAAQKQLEAVLDVVKLKRKELENTKSALRG-LPTLLGSLDNDLKPLRTLIHKKPVKYTTSPTIPEAQQLPAPLYVLTRQAMGYRDSFGDLSVSILGDAPKRPLR------------------------------KDP------------YAVHPMRVQIDVHCNGIEQALRVKFSYHVNLNIVSVS-SVIVADGTETPSY-----PTKELQMLYPFDFGEESPNPGNAYLER--GTFKFDISKAHGSRPFVWANVVCGI-----TSMLPIESHKARIVDQFQFAKWPSRAMEISGHVRFKDVFETLKSRLKSIVSLKKQIELLLSKSLPVVPAGIGIRTEPKSKLE--DFVKLPPQDWAG---DERLAREGTGGKYTEVWCMVISREA----LRINCMIGIEPDYPIGPPVFRLVCD------------KGSEFVSEMDVLDLERCVN--------ELSGSEKLKGHEELLLGAQIIALLSYLD 566
VSLK + L + N R+E +++ + + +L NL YE+ L+ E+ C S +++ + P++ ED S H+ + L ELL+R K Q++ E V +K KR +LEN L+ L T LDN +++ P+ A LP PLY L Q++ ++ + V ++ + LR KDP A HP+ + I + N ++ +KFSY +NL +V+V SV +++ S P L LYP D+GE SPNP N + + G FD +A G+ P+ WA + G+ TS+ IE+ K I + V + +K RLKS ++L KQI+ +VP + PK + E + ++ ++ + KY + +++R +++ + + +YP PPVF + C +G +++ V ++ER VN +LS S + +L AQ++ L+S D
Sbjct: 99 VSLKKLNRLEKIRTKNLREELHQKKQLVDSYELQLQNLLYELMYLKKEVTKCLQFKSKDEDIELIPVEQFYAEAPNSVKEEDITSQDPHKLRLARLQWELLQRQQLATKCKELQEEKERVTTEIKRKRSQLENLAPLLKTVLATAKPVLDNLGLTAGHSLNEHPL----------ASVLPHPLYFLYVQSVALKEVTDESMVVLINGEEEEALRAKEYVIDSQMLEDSDSDAEPEFQKEERHSWKDPKLDKKAEHLKKLLAEHPLSLTISIPINENGSSISMKFSYLLNLRVVTVRISVQISESIRGISASALLNPFNILSALYPGDYGEISPNPANFHQLKQVGVQSFD-REALGT-PYNWAQKIAGLDFEGCTSVNKIEA-KCSISQE-----------------NLPSVMKAIKRRLKSRIALCKQIQ-DFEVGCVMVPPPLMEHFPPKRQCELTQWRQIAFSEYEALGYTKHFVENAVVTKYDIFFKTLLTRINPGIDVQLYVAVAVRANYPEAPPVFAVCCSNEKNLIPEEIYARGKTALNDECVRNMEREVNCHWNEVVQDLSDSNRAA----VLFTAQMLKLMSCFD 657 The following BLAST results are available for this feature:
BLAST of Ggra1305.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1305.t2 ID=Ggra1305.t2|Name=Ggra1305.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=606bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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