Ggra1299.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1299.t1
Unique NameGgra1299.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length431
Homology
BLAST of Ggra1299.t1 vs. uniprot
Match: A0A2V3IQ90 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ90_9FLOR)

HSP 1 Score: 444 bits (1141), Expect = 4.570e-151
Identity = 208/399 (52.13%), Postives = 280/399 (70.18%), Query Frame = 0
Query:   25 PHPKRLTPQPLHVLALFSLLLLAIHHVFQPRFAPNRPHLVTLTHGGLGNQIYFLLESLLLSRHAHLVFVPPTVPQRNIPGLPHQARDQPAHLFWNLATMNHFTDVAHPLPDACRRGYTAVYMARRGSGPIAPSRRLIRTACLYSGGSRPQETEEQCGQRALDAATLHKRYLNFTAEGDHSLIHELRNLQRGCVVVDGHSFSHSGTLAQEYLHSALHYVQASPYIANMLSKWQRKRMTVLHIRYDEYLCDKDRPYLCIRRTLSTNNNDTVVYVQPRQFVAAVSQLMRSKHSSHIYIAASPYTPPSMLSALDYLFSNHTNVLPRVSGLDETTENFLERELAIQAHVFVGDFASTWSGTVYYKRRTLGKATEWSCKLANKCDDLAHYRYNERLETPQWFEKQ 423
            P  KR   +PLHVLA+F+L LL  HH+       ++P L+T+THGG+GNQIYFLL++L+L+R   LV VPPT+P R +P  PH++ + PA  FW+L  M  F  ++  LP +CRRG T VY+ RRG+G + PS RL++  C  +G  +P ET  QC  RA+   ++H+ ++ F+  GD +L+HELR L+  CV+VDGHSFS SG  A +Y++S LHYV+A+P +  M+      RMT+LH+RYDE+ CD +   +CIRR L+  +NDTVVYV P   V AV + MRS +S+ +YIAASPY PP  +++L+  F  H  VLPRV GLDE  ENF+ERELAI AHVFVGDFASTWSGTVY+KRRT+GK ++WSC L ++C DL +Y   ERL  P+WFEK+
Sbjct:   15 PVSKRRLLKPLHVLAVFALCLLIAHHLPLSIPHSHQPALLTVTHGGIGNQIYFLLQALILARQTGLVLVPPTIPARRLPRFPHRSEEHPAQNFWDLGVMARFAPLSEQLPSSCRRGITHVYLVRRGAGKLLPSSRLLQIVCQMAGDKQPSETVGQCADRAMSRISVHRHHMKFSTAGDPALVHELRQLRDACVIVDGHSFSFSGHRAHQYVYSVLHYVEAAPIVKEMMRNSWASRMTLLHLRYDEHECDTEHGGVCIRRKLNIGSNDTVVYVTPSALVGAVVRKMRSANSTSLYIAASPYVPPQTMASLENEFQAHIRVLPRVGGLDEAMENFVERELAINAHVFVGDFASTWSGTVYFKRRTMGKVSDWSCVLVDQCQDLGYYEDKERLNAPEWFEKE 413          
BLAST of Ggra1299.t1 vs. uniprot
Match: A0A2V3IT03 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT03_9FLOR)

HSP 1 Score: 346 bits (888), Expect = 1.610e-112
Identity = 175/402 (43.53%), Postives = 247/402 (61.44%), Query Frame = 0
Query:   35 LHVLALFSLLLLAIHHVFQPRF-----APNRPHLVTLTHGGLGNQIYFLLESLLLSRHAHLVFVPPTVPQRNIPGLPHQARDQPAHLFWNLATMNHFTDVAHPLPDACRRGYTAVYMARRGSGPIAP--SRRLIRTACLYSGGSRPQETEEQCGQRALDAATLHKRYLNFTAEGDHSLIHELRNLQRGCVVVDGHSFSHSGTLAQEYLHSALHYVQASPYIANMLSKWQRKRMTVLHIRYDEYLCDKDRPYLCIRRTLSTNNNDTVVYVQPRQFVAAVSQLMRSKHSSHIYIAASPYTPPSMLSALDYLFSNHTNVLPRVSGLDETTENFLERELAIQAHVFVGDFASTWSGTVYYKRRTLGKATEWSCKLANKCDDLAHYRYNERLETPQWFEKQHRFSPS 429
            L + +LF+L+ ++  H+  PR        +RP L+T+THGGLGNQIY LLE+++L+R A  +FVPP++P R+I G+PH ++D PA  FW+L  M+ FT  +   P +C  G T  ++ +RG   +    S  L+  AC          +  +CG+ AL    + + YL+ +  GD SL+ ELR ++ GCVV+DG S++ SG +A  YL+S LHYV+AS Y+  ++ K  +  MTV H+RYDE+ CD +R  +CIRR L    NDT+VYV     V A+ + M ++ S+ IY+AASPY P  +L  L    +    V+ R    DE   NF+ERELAI A VF+GDF STWSG VYYKRRT+GK + WSCK+   C DLA +  N +L  P WFEK +  S S
Sbjct:   40 LSLFSLFTLIAVSFLHLRIPRLLELSQVSSRPALLTVTHGGLGNQIYVLLEAMMLARQAGFIFVPPSIPPRHIQGIPHSSKDHPADKFWDLKLMSRFTTTSQQ-PPSCAHGITNAFLLQRGKKLVEAQISSGLLHLACDLDPNQTQPISVRECGETALRKVLIKQIYLDHSLAGDDSLLEELRQIREGCVVIDGPSYTFSGEIANNYLYSLLHYVEASEYVQELMRKLWKPGMTVFHLRYDEHNCDTNRTNVCIRRKLEPRKNDTMVYVPVGGLVNAILRKMHAEKSTSIYVAASPYVPTRILKPLLQRLAKDIEVVERFQASDEAIVNFVERELAINAQVFIGDFGSTWSGNVYYKRRTMGKKSAWSCKVVGLCTDLAFHTLNGKLNNPHWFEKMYNISHS 440          
BLAST of Ggra1299.t1 vs. uniprot
Match: A0A2V3J0F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0F3_9FLOR)

HSP 1 Score: 276 bits (707), Expect = 1.470e-85
Identity = 144/369 (39.02%), Postives = 213/369 (57.72%), Query Frame = 0
Query:   67 THGGLGNQIYFLLESLLLSRHAHLVFVPPTVPQRNIPG--LPHQARDQPAHLFWNLATMNHFTDVAHPLPDACRRGYTAVYMARRGSGPIAPSRRLIRTACLYSGGSRPQETEEQCGQRALDAATLHKRYLNFTAEGDHSLIHELRNLQRGCVVVDGHSFSHSGTLAQEYLHSALHYVQASPYIANMLSKWQRKRMTVLHIRYDEYLCDKD----RPYLCIRRTLSTNNNDTVVYVQPRQFVAAVSQLMRSKHSSHIYIAASPYTPPSMLSALDYLFSNHTNVLPRV-SGLDETTENFLERELAIQAHVFVGDFASTWSGTVYYKRRTLGKATEWSCKLANKCDDLAHYRYNERLETPQWFEKQHRFSP 428
            ++GGLGNQ+Y+L E L+ +R  ++  VPPTV  R++PG  +    +D+    F +   +    +V+  LP+ C      +++ RR  G +       R A     G +P ET   C +R  + + LH+R+L  +   + SL+ E+ +L+  CV +DGHSF   G   QEYL+S +HY++A+P +  +  +W+  R+ V H+RYDE  C  D    +  +CIRR L T   DTV++      V  V  LM+ K ++ +Y+A SPY P      L  LF+    +   V  GL    +NF+ERELAI+A VFVGDFASTWSGT+YYKRRTL + T+WSC L  KC + A Y  + +LETP+WFEK ++  P
Sbjct:   52 SYGGLGNQLYYLCEHLMFARQGNMTLVPPTVGMRHLPGENVTVYLQDEAYDTFLDSRFLKKVVNVSLVLPNHCDNRVQHIFLGRR-HGVLDLQTPRYREAAQRLIGKKPNETLNSCAKRFAEGSKLHRRFLPMSYGSNFSLVKEVASLRGSCVFLDGHSFFWKGAEGQEYLYSFMHYIEAAPRVKRLADQWKTGRLCVFHLRYDERECLPDVERMKEKVCIRRRLRTRAKDTVIWTDMEPLVNGVVTLMQQKGANVLYLALSPYVPQGTALKLKSLFAKKVKIATAVPDGLGHMLKNFVERELAIRAKVFVGDFASTWSGTLYYKRRTLSRDTQWSCALLEKCTEFAFYNNHSKLETPEWFEKHYKVRP 419          
BLAST of Ggra1299.t1 vs. uniprot
Match: R7QP59 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP59_CHOCR)

HSP 1 Score: 99.4 bits (246), Expect = 1.510e-21
Identity = 51/123 (41.46%), Postives = 72/123 (58.54%), Query Frame = 0
Query:  309 MRSKHSSHIYIAASPYTPPSMLSALDYLFSNHTNVLPRVS-GLDETTENFLERELAIQAHVFVGDFASTWSGTVYYKRRTLGKATEWSCKLANKCDDLAHYRYNERLETPQWFEKQHRFSPSG 430
            M ++ +  +++AASPY P   +  L   F     + P V   L    +NF+ERELA++   F+GDFASTWSGTVYYKRRTLG  T W+  L  K   L +Y   ER+  P+  E + +F+ +G
Sbjct:    1 MAAEQTPALFLAASPYVPEETVRQLREAFGKRARLAPPVKQSLLHNDQNFVERELAVRCGCFIGDFASTWSGTVYYKRRTLGLKTHWTSVLLEKSKTLGYYAEEERIPRPE--ELEAKFAVAG 121          
The following BLAST results are available for this feature:
BLAST of Ggra1299.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IQ904.570e-15152.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT031.610e-11243.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0F31.470e-8539.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QP591.510e-2141.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 226..397
e-value: 5.7E-9
score: 37.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..52
NoneNo IPR availableCDDcd11296O-FucT_likecoord: 230..390
e-value: 1.24636E-11
score: 61.6644

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:71335..72627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1299.t1Ggra1299.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 71335..72627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1299.t1 ID=Ggra1299.t1|Name=Ggra1299.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=431bp
MASVPAIKIAAAPRTMRLRNALLSPHPKRLTPQPLHVLALFSLLLLAIHH
VFQPRFAPNRPHLVTLTHGGLGNQIYFLLESLLLSRHAHLVFVPPTVPQR
NIPGLPHQARDQPAHLFWNLATMNHFTDVAHPLPDACRRGYTAVYMARRG
SGPIAPSRRLIRTACLYSGGSRPQETEEQCGQRALDAATLHKRYLNFTAE
GDHSLIHELRNLQRGCVVVDGHSFSHSGTLAQEYLHSALHYVQASPYIAN
MLSKWQRKRMTVLHIRYDEYLCDKDRPYLCIRRTLSTNNNDTVVYVQPRQ
FVAAVSQLMRSKHSSHIYIAASPYTPPSMLSALDYLFSNHTNVLPRVSGL
DETTENFLERELAIQAHVFVGDFASTWSGTVYYKRRTLGKATEWSCKLAN
KCDDLAHYRYNERLETPQWFEKQHRFSPSG*
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